Oryctolagus cuniculus (rabbit): 100344854
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Entry
100344854 CDS
T03373
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100344854
Membrane trafficking [BR:
ocu04131
]
Protein recycling
Others
EARP complex
100344854
Endosome - Golgi transport
Tethering complex
GARP complex
100344854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
Laminin_II
Syndetin_C
NBD94
hAT-like_RNase-H
COG3_N
NFRKB_winged
Snf7
COG5_N
FUSC
XhlA
MCPsignal
Motif
Other DBs
NCBI-GeneID:
100344854
NCBI-ProteinID:
XP_051681883
Ensembl:
ENSOCUG00000002194
LinkDB
All DBs
Position
19:complement(14618589..14768105)
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AA seq
841 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRVKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMTERIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGSLVRPPEGGRIVWLGLGVSVIFSDRESTCYCSNIEFFFLYFFSLQPKKPK
APDNPFHGLVSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGAVLPSC
ADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISS
LLKEKEGSEAAKFTLEELCLLCSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEM
DTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPI
IRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLP
SIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQK
ILDMKGLKRSEQSSMLELFRQRLPAPPSGPEGSSSLSLMAPTPEQESSRIRKLEKLIKKR
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagttcgtggaggagctggaagccgtgctgcagctcacg
cccgaggtgcagctcgccatcgagcaggtatttccgagtcaggatcctttagatcgagca
gatttcaatgctgttgagtatatcaataccctctttccaacagagcaatctctggcaaac
atagatgaagtcgtgaacaaaattagactgaaaatcaggagactggatgacaatattcga
actgttgtaagaggtcagacaaatgtggggcaagatgggaggcaggcacttgaagaggcc
cagaaggctattcagcagctctttggcaaaatcaaagacatcaaagacaaggcagaaaaa
tcagagcaaatggttaaagaaatcacccgtgatatcaagcagttagatcatgccaaacgc
cacctgaccacctcaatcaccacgctgaaccacttgcacatgctggcgggtggtgtcgac
tccctcgaggccatgaccaggagaaggcagtatggggaagttgccaatctcctgcagggc
gtgatgaatgtcctggagcacttccacaagtacatgggcatcccgcagatccggcagctt
tctgaaagagtgaaagctgcgcagactgagttaggacagcaaatcctggcagattttgaa
gaagcatttccttcccagggtaccaagaggccaggaggacccagcaatgtcctacgagat
gcgtgtctggttgctaatattttggaccccagagtcaagcaggaaatcatcaaaaagttt
attaaacagcacctgtcagaatatctagtgctttttcaagaaaatcaagatgttgcctgg
ctggacaaaattgacagacgttatgcctggataaaacgccagcttgtggactatgaggag
aaatatggccgtatgtttccacgtgagtggtacatgactgagaggattgcagtagaattc
tgccatgtgacaaggacagaacttgccaagattatgcgtaccagagccaaggaaattgaa
gtgaaattgcttctttttgccattcagagaacaactaactttgaaggatttcttgcaaaa
cgcttctccggttgcaccctgacagatggaagcctggtaagacctcctgagggaggccga
attgtgtggctgggccttggtgtttcagtgattttcagtgaccgggaatccacctgttat
tgctcaaatatagagttcttttttctttattttttttctttgcagccaaagaagcccaaa
gccccagacaatccatttcacggccttgtttccaagtgttttgagcctcatctctatgtg
tacatcgagtcccaagacaaaaacctcggagagttgatagatcggtttgtggctgatttc
aaagcccaagggccacctaagcccaatactgatgaagggggtgccgtgctccccagctgt
gccgacctctttgtctactacaagaagtgcatggtgcagtgctctcagctcagcactggg
gagccaatgatcgccctgaccaccattttccagaagtacctccgagaatatgcctggaaa
atcctctctggcaatctgcccaaaaccaccacgagcagcggagggctgaccatcagcagc
ctcctcaaggaaaaggagggctcagaagctgccaagttcaccctcgaggagctctgcctc
ctctgcagcatcctgagcacagcagagtactgtctggccaccacccagcagctagaagaa
aaactcaaagaaaaagttgatgtaagtctgactgaacgaatcaatctaactggagaaatg
gacaccttcagcactgtcatctccagcagtattcagctgctggttcaggacctcgatgct
gcttgtgatcctgccctgactgccatgagcaagatgcagtggcagaacgtggagcacgtt
ggtgaccagagcccctatgtcacctctgtcattcttcacattaagcagaatgtccctatc
atccgcgacaacctggcttccacgcggaaatacttcactcagttctgcattaaatttgca
aactccttcattcccaagtttatcactcacctcttcaagtgcaagccaattagcatggtg
ggagcagagcagctgctactggacacccactccctgaagatggtcctgctcgacctcccg
tccatcggctcgcaggtggtgaggaaggcccccgccagctacaccaagattgtcgtgaag
ggcatgacgcgggccgagatgatcctcaaggtagtgatggcccctcatgaaccactggtg
gtgtttgtcgacaactacatcaaactcctgacagactgcaacacagaaaccttccagaag
atactggacatgaaggggctgaagcgaagtgagcagagcagcatgctggaactcttccgc
cagcggctccccgccccgccctcagggccagaaggctccagctctctgtccctgatggct
ccaaccccggaacaggagtcctcgcgaatccgcaaactcgagaaactcattaaaaagaga
ctgtag
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