Oryctolagus cuniculus (rabbit): 100345122
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Entry
100345122 CDS
T03373
Name
(RefSeq) autophagy-related protein 16-1 isoform X2
KO
K17890
autophagy-related protein 16-1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04136
Autophagy - other
ocu04140
Autophagy - animal
ocu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100345122
04136 Autophagy - other
100345122
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100345122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100345122
03029 Mitochondrial biogenesis [BR:
ocu03029
]
100345122
Membrane trafficking [BR:
ocu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100345122
Others
Specific organelles associated proteins
Auto phagosome
100345122
Mitochondrial biogenesis [BR:
ocu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100345122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
KASH_CCD
Img2
Motif
Other DBs
NCBI-GeneID:
100345122
NCBI-ProteinID:
XP_002721481
Ensembl:
ENSOCUG00000015285
UniProt:
A0A5F9C5F5
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MSSGLRPGDFPRWKRHISEELRRRDRLQRQTFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDPPNRHELSPGHDSAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQVNEAKIAECLQTISDLETECLDLRTKLQDLEIANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLVDEASDHTEETSPVRAVSRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQEHVDA
HPGSGKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMDRKVKLWEAFGDKCEFKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSET
IVREMELLGKITALDLNPERTELLSCSRDDLLKVVDLRANAVRQTFSAPGFKCGSDWTRV
VFSPDGSYVTAGSADGSLYVWSVLTGKVEQVLTKQHSSCINAVAWSPSGLHVVSVDKGSK
AVLWAQP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggtctccgccccggcgacttcccccgctggaagcgccacatctcggaggag
ctgaggcgccgggaccggctgcagaggcagacgttcgaggagatcatcctgcagtacaac
aagttgctggaaaagtcggatcttcattcagtgttggcccagaaactacaagctgaaaag
catgacccaccaaaccggcatgagctaagtcctggacatgatagtgcatggaatgacagc
cagctgcaagaaatggcccagctgagaattaaacaccaagaagagctgactgaattacac
aagaaacgtggggagttagctcagctggtgatcgacctgaataaccagatgcagcagaag
gaccgggagatgcaggtgaatgaggcaaaaattgcagaatgcttgcagactatctctgac
ctggagaccgagtgcctggatctgcggactaagcttcaggacctggaaatagccaatcag
accctgaaggatgaatatgatgccctgcagatcacgttcactgccttggaggagaaactg
aggaaaaccacggaggagaaccaggagctggtcacccggtggatggctgagaaagcccag
gaagccaatcgcctcaacgcagagaatgagaaggactccaggcggcggcaagcccggctg
cagaaggagctcgcggaagccgcaaaggagcctctgccggtggagcaggacgatgacatt
gaagtcctcgtggatgaagcctctgaccacactgaggagacctctcccgtgcgagccgtc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggagacgctcagtctcttccttcccagtcccccaggaacatgtggatgct
cacccgggttctggtaaagaagtgagggtgccaaccactgccctgtgtgtctttgatgcc
catgatggggaagtcaacgctgtgcagttcagtccaggttcccgcttactggccacagga
ggcatggaccggaaagtaaagctttgggaagcgtttggagacaaatgtgagtttaagggt
tccctgtctggcagtaatgctggcatcaccagcattgaattcgacagtgctggttcttac
ctcttagcagcttccaatgattttgcaagccgaatctggactgtggatgattatcgatta
cggcacacactcacgggacacagtgggaaagtgctctctgccaagttcctgctggacaac
gcacggatcgtgtcgggaagtcacgaccggaccctcaaactctgggacctgcgcagcaaa
gtctgcataaagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcag
tgtgtaatgagtggacattttgacaagaaaattcgtttctgggacatccgatcagagacg
atcgtccgagagatggagctgttggggaagattactgccctggacttgaacccagaaagg
accgagctcctgagctgctcccgtgacgacctgctcaaagttgttgatctccgagcgaat
gctgtgaggcagacattcagtgcgcctggattcaagtgcggctctgactggaccagagtt
gtcttcagccccgatggcagttacgtgacagcaggctcggccgacggctcgctctacgtg
tggagtgtgctcacggggaaagtggagcaggtgctaacgaagcagcacagctcatgcatc
aatgcggtggcatggtccccctccggcctccacgtggtcagtgtggacaaaggcagcaaa
gccgtgctgtgggcacagccgtga
DBGET
integrated database retrieval system
