Oryctolagus cuniculus (rabbit): 100345182
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Entry
100345182 CDS
T03373
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100345182
03041 Spliceosome [BR:
ocu03041
]
100345182
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100345182
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100345182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100345182
NCBI-ProteinID:
XP_008265400
Ensembl:
ENSOCUG00000008336
LinkDB
All DBs
Position
14:complement(162763894..162830011)
Genome browser
AA seq
1154 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSETPQATPNSLPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTAPTQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEEAVAATTAAPAAVAPAAVAPA
APATTAPAATAPAATSPPPQTPFGFPGDAMQQPAYTQHQNMEQFQPRMMGMQQDPMHHQV
PLPPNGQMPAYGLLPTAFPPMAQPVITPPPPVQQPFQPTFQAQSEPHTQKPHQQEMEVEQ
PCIQEVKRHVPDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRS
QERRDREKERERRQKGLPQIKAETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESIN
MIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELG
VTYIPWDKVKPEELEGFCEGGMLDNDTLNPDWKGIPKKPENEVAQNGGAEASHTEPVSPI
PKPLPVPVPPMPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPP
PPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKD
LSIGNPIPTVVSGARGNAESGDSAKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGP
VIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFA
MPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQQQQQQQQQQPPPPQP
QPPPPSQQPPPAQQPQPPQQQQQQQQQQFRNENRQQQFNSGRDQERFGRRSFGNRVENDR
ERYGNRNDDRDHSNRERREWGRRSPDRDRHRDLEERSRRSSGHRDRERDSRDRESRREKE
ESRGKEKPEVADRAGGNRTIEPAVSQVGNVDTGAELDKGECESAVVKPPEESPAEATSSV
EPEKDSGSAAEAPR
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttctcacttatggacatgaaacctccc
atctctagagccaagatgattcttatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagagtacaaagtt
ccaggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccaatatttgtat
ctttgtccatctgaggataagagtaaaatagtccgtgtgctgaacctttggcaaaaaaat
ggagtgttcaaaattgaaattattcaaccacttttggacatggcagcaggaaccagtaat
gccgccccagtagcagaaaatgttaccaataatgaaggctcacctccacctccagtaaaa
gtttcttctgaaaccccacaagccactccaaactccttaccaactgtcccacagttgccc
agctctgatgcttttgctgctgtggctcaactgtttcagacaactcaaggtcaacagctt
cagcagatccttcagacttttcaacaacctccaaaaccacagtctcccgcccttgacaat
gctgtgatggctcaggttcaggctatcacagctcagttaaagacagctcctacacaacca
cctgaacaaaaagctgctttccccccacctgaacaaaaaactgcatttgacaagaagctg
cttgatagatttgattatgatgatgagccagaggctgtggaagaatcaaagaaagaggaa
gctgttgctgccaccactgcagcccctgctgccgttgcacctgctgccgttgcacctgct
gcgcctgccaccacagcccctgctgccacagcgcctgctgccacctctcctcctcctcag
acacccttcggatttcctggagatgccatgcagcagccagcatacacgcaacatcaaaat
atggaacagtttcaacctcgaatgatgggaatgcaacaggatccgatgcaccatcaggtt
ccacttcctcctaatggacagatgccagcgtatggacttcttcctacagcatttcctccc
atggctcagcctgtgattactccacctccaccagtgcagcagcctttccaacctactttt
caggcacaaagtgaaccacatacgcagaagccacatcagcaagaaatggaagtagaacag
ccttgtattcaagaagttaaacggcatgtgcctgataaccgaaaatcaagatctaggtca
gcatccaggtcaccaaaaaggaggcgatctagatctgggtctagatctcggaggtctcgt
catcgacgttctcgatctcgctccagggacagacgccggcattctccccgctctcggtcc
caggagagacgggatcgagagaaggagagggagcgaagacaaaagggccttcctcagatc
aaagcagaaactgccagtgtttgcagtactacactctgggtaggacagctggacaaaagg
actactcagcaggatgttgccagtctcttagaagagtttggtccaattgaatccattaac
atgattcctcccagaggttgtgcctatatcgtaatggttcataggcaagatgcttatcgt
gcgctgcagaagctgagccgaggaaactataaagtgaaccagaaatccataaagattgcc
tgggccttgaacaaaggaataaaggcagattataagcagtattgggatgtagaacttggt
gttacatatattccatgggacaaagtcaagcccgaggaattggagggattttgtgaagga
ggaatgctggacaatgacacacttaacccagattggaaaggaattcccaagaagcctgaa
aatgaagttgctcaaaatggaggtgcagaagcatcacacacagaaccagtgtcacccata
cctaaacctttacctgtgcctgttcctcctatgcctgttcctgcacctatcactgtacca
cctccacaggtcccaccgcatcagcctggtcctcctgtagttggtgctctccaacctccc
acattcacacctcctttgggaattccccctccaggttttggtcctggtgttcctccgccc
cctcctcctccaccatttttgcgcccaggattcaatccaatgcatttgccaccaggtttt
cttcctcctggacccccacctcctataactccgccagtatccattcctcctcctcacact
ccaccaataagcatcccaaactctactatcgctggtataaatgaagacactacaaaagac
ttatctattggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtct
ggtgacagtgcgaaaatgtatggctctgctgtgccacctgctgcacccacgaatctgcct
acccctcctgtcactcagcctgtttcacttctgggcactcaaggagtggcccctggccct
gtgatcgggctccaggccccatcgactggtcttcttggcgcccgccccggcctgatcccg
ctccagcgccctcccgggatgccgccgcctcacctgcagagatttcctctgatgcccccg
cgccccatgccgccacacatgatgcacagaggcccacctccgggaccggggggcttcgcc
atgcctccacctcatggaatgaaaggccccttcccaccacacggccccttcgttaggcct
gggggaatgccagggctggggggcccagggccaggcccagggggtcctgaggacagagat
gggaggcagcagcagcagcaacagcaacagcagcagcagcagccgcctccgccacagccg
cagccaccgccgccgtcacaacagccgcccccagctcagcagccacagccgccgcaacag
cagcagcagcagcagcagcagcagtttagaaatgaaaacaggcagcagcagttcaattca
ggtagagaccaagaaaggtttggaagaagatcttttggaaatagggtggaaaatgaccgg
gaacggtatgggaaccgtaatgatgatagagatcatagtaaccgtgaaaggagagagtgg
ggaaggaggagccctgaccgggacaggcacagagacttggaagagagaagtagacgctct
agcgggcaccgagacagagagagagattctagagatagggagtctcgtagagagaaggaa
gaaagccgaggaaaggagaagcccgaggtggcagacagggcaggtgggaaccgaaccatt
gagcctgccgttagccaagtgggaaatgtagacactggtgcagaacttgataagggcgag
tgcgagtctgcagttgtaaaacctcctgaagagtcacctgctgaggctacctcatccgtt
gaacccgaaaaggattctggctcagcagccgaggctcctcgttag
DBGET
integrated database retrieval system
