Oryctolagus cuniculus (rabbit): 100345320
Help
Entry
100345320 CDS
T03373
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocu01002
]
100345320
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100345320
Enzymes [BR:
ocu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100345320
Peptidases and inhibitors [BR:
ocu01002
]
Cysteine peptidases
Family C64
100345320
Ubiquitin system [BR:
ocu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
100345320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
100345320
NCBI-ProteinID:
XP_008253816
Ensembl:
ENSOCUG00000015198
UniProt:
G1T8X7
LinkDB
All DBs
Position
3:complement(82310990..82343465)
Genome browser
AA seq
1218 aa
AA seq
DB search
MSQPPPPPPLPPPPPPPEAPQTPSSLAAAAAIAPGGLSKRRDRRILSGSCPDPKCQARLF
FPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKV
MGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVG
YGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALR
ENLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVL
HRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPLV
GIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEDDGGCVIGGDRSLQDKYLLRLVAAMEE
VFMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELH
VPPEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDTVKDVLVPDYGLSNLTACN
WCHGTSVRRVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWG
GRVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKN
PDDYTPVNIDGAHAQRVGDAQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQN
ITEQASAMQKRKTEKLKQEPKGHPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRI
TTNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVP
LQHGDRITIEILKSKAEGGQSAAAHSAHTVKQEEIAVTGKLSSKELQEQADKEMYSLCLL
ATLMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRL
ELCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQL
HNVTAFQGKGHSLGTASSSPHLDPRARERKHNTGTDFSHSSTKTEPPVFTSAPGNSELIR
MAPGVVTTRDSRQLDPDLVEAQRKKLQEMVSSIQASMDKHLRDQSTEQSPSDLPQRKGEV
SSSARSGSLQTSVAESFSLTGGTENLNTETTDSCVADALGAAFATRSKAQKGNSVEEPEE
MDSQDAEMTNTTEPMDHS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgccgccgcctccgctgccgccgccacctccaccccctgaagctccg
cagactccgtcgtctctggcggcggcggcggcgatagctccgggggggctctcgaagcgg
agggaccggagaatcctttccgggagctgcccggatccaaagtgccaggcgcgtctgttc
ttcccggcctccggttctgtcagcatcgagtgtaccgagtgcggacagcggcacgagcag
caacagctgctgggggtggaagaggtgaccgacccggacgtggtgctgcacaacctgctg
cggaacgcgctgctcggggtgacgggggcacccaagaagaacacggaactggtaaaggtg
atgggcctttccaactaccactgcaaattgttgtcgcccatattagctcgctatggcatg
gacaaacagacaggccgagccaagcttctccgggacatgaaccaaggggaactgttcgat
tgcgctttactgggtgaccgcgccttcctcatagaaccagaacatgtgaacacggtgggc
tatggcaaggaccgctctggaagccttctgtatttgcatgacactcttgaggacatcaag
cgggccaataaaagtcaggaatgcctcattccagtgcatgtggacggggatggacactgc
ctggtgcatgctgtgtctcgtgcgctggtaggccgggagcttttctggcatgccttgaga
gagaatctgaagcagcactttcagcagcacttggcccgataccaagccctgttccatgac
ttcatcgatgctgctgagtgggaggacattatcaatgagtgtgaccctctgtttgtacca
cctgagggtgttcctttgggtctgaggaacatccacatatttggccttgcgaatgtgtta
catcgtcccattattctgttagattccctcagtggtatgagaagctctggcgattattca
gccacctttctgcctggactcatcccagcagagaagtgcactgggagagatggtcacttg
aacaaaccaatctgtattgcgtggagtagttctggtagaaaccattatatccccttggtg
ggcataaaaggggctgctttgcccaaactgcctatgaatttactacctaaagcatggggt
gtgcctcaggaccttatcaaaaagtacataaaacttgaggatgatggtggttgtgttatt
ggaggagacagaagtttgcaagataagtacttacttaggcttgttgctgctatggaagaa
gtctttatggacaaacatggtatccatcctagtttggttgctgatgtccatcagtatttc
tacaggaggactggggtgataggagttcagcccgaagaagttacagcagctgctaaaaaa
gcagtaatggataatcgccttcacaaatgtttgctctgtggtgccctttctgaacttcat
gttcctccagagtggttggctccaggagggaaactgtataacctggcaaaaagcactcac
ggacagctgaggcctgacaaaaattacagctttcccttgaacaatttggtctgctcatac
gatacagtgaaagatgttctggtaccagactatggattgagtaatctaacagcttgtaat
tggtgccatggcacatctgtgcggagggtcagaggagatgggtctattgtgtatttggat
ggagacagaactaattctaggtccactggtggcaaatgtggttgtggattcaaacacttt
tgggatgggaaagagtatgacaatctaccagaagcttttcctattactttggaatggggt
ggaagagtggtcagagaaacagtatattggttccagtatgaaagtgattcatctttgaat
agtaatgtttatgatgttgcaatgaaacttgttaccaagcactttccaggtgaatttggg
agtgaaatcctagttcagaaagttgtccatactatattgcatcagactgccaaaaagaat
cctgatgattatacccctgtaaatatagatggtgctcatgcccaaagagttggagatgca
caaggacaagaatcagagtctcagctcccaactaaaattatacttactggacagaaaaca
aaaactttacacaaagaggagttaaacatgagtaaaactgaaagaactattcaacagaat
attacggaacaggcttctgcaatgcagaaacggaaaacggagaagttaaaacaagaacca
aaagggcatcccaggactgtttctcccagtaccattcgtgatggcccatcctctgcacct
gccacccccaccaaggctccttattcacctacaacttctaaggagaagaagatccgaata
acaactaatgatgggcggcagtccatggttacacttaaatcttcaacaaccttttttgaa
cttcaggaaagtatagccagagaattcaacattcctccatatttgcagtgtattcgatat
ggttttcctcctaaagagttaatgccaccacaggcagggatggaaaaggaaccagttcct
ttacagcatggtgacagaattacaatagagattctgaagagtaaagcagaaggtggccag
tctgctgcagcacactcagcccacactgtgaaacaagaagagattgctgttactggtaaa
ctgtcatctaaggaacttcaggagcaagctgacaaagaaatgtactccttgtgtcttcta
gcaacattaatgggagaagatgtatggtcttatgcaaaaggacttccacacatgtttcag
cagggtggtgtcttctacaatattatgaagaaaaccatgggtatggctgatggcaaacat
tgtacttttccacatctacctggcaaaacctttgtctataatgcttctgaagatagactg
gagttgtgtgtggatgctgcaggacacttccccattggtcctgatgttgaagatttagtt
aaagaggctgtaagtcaggttcgagcagaggctactacaagaagcagggaatcaagcccc
tcacatgggctattaaaactaggtagtggtggcgtagtaaaaaagaaatctgagcaactt
cataacgtaactgcttttcagggaaaggggcattctctaggaactgcatccagtagtcca
caccttgatccaagagctagggaaagaaagcataatacagggacagactttagtcatagt
tccacaaaaacagagcctcctgtcttcacatctgctcctggtaacagtgagctgattcga
atggcgcctggagtagtaacaacgagagacagcaggcagcttgatcctgatttggttgag
gcccaacgaaaaaaattgcaggaaatggtttcttctatccaggcttcaatggacaagcac
ttacgggatcaaagcacagagcagtcaccatctgatcttcctcagaggaaaggagaagtg
agttcttctgcaaggtctgggagtcttcagactagcgtggctgaatctttttctttaact
ggtggcactgaaaatttgaatacagaaacaactgatagctgtgtggcagatgcattggga
gcagcttttgccacaaggtcaaaagcacaaaagggaaattctgtggaggaacctgaagag
atggatagtcaagatgctgagatgactaacacaactgagccaatggatcactcttga
DBGET
integrated database retrieval system
