KEGG   Oryctolagus cuniculus (rabbit): 100345334
Entry
100345334         CDS       T03373                                 
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    100345334
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocu01009]
    100345334
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocu04515]
    100345334
Protein phosphatases and associated proteins [BR:ocu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100345334
Cell adhesion molecules [BR:ocu04515]
 Cadherins
  Protocadherins
   100345334
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 100345334
NCBI-ProteinID: XP_002713025
Ensembl: ENSOCUG00000016877
UniProt: G1TMK1
LinkDB
Position
8:48703984..48711959
AA seq 952 aa
MRGRGNARSPRALAVSWRPATWHPRLDMGRLRRPRSSSSHRNLPHLFLFLLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAASRQDQHSQSPERTRAEWNPPLSFS
LASSGLSGQYVTLDNRSGELHTSAQEIDREALCLDRGGEAAWGGSVSISSSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDI
GTNGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGSLDRETQDQYVSIIIAEDGGSPP
LLGSATLTIGISDINDNCPLFIDSQINVTVYGNATVGTPIAAVQAVDRDLGTNAQITYTY
SQKVPQASKDLFHLDETTGVITLFSKIGGSVLQMHKLTILANGPGCIPAVITALVSVIKV
IFRPPEIVPRYIANEIDGVVYLKELEPVHTPVAFFTIRDPEDKYKVNCYLDGEGPFRLSP
YKPYNNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKRIIKVQLLDDNDNAPVFLQPL
IELTIEENNAPNAFLTKLYATDADSGERGQVLYFLGPDAPSYFSLDNVTGILTVSTQLDR
EEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESLSCMPTLVALSVISLG
SITLVTGMGIYICLRKEKKPHREDDNLEVQIPLKGKIDLHMRERKPMHISNI
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgcgcggccgagggaatgcgcgcagcccgcgagccctggcagtgagctggcgcccggcg
acctggcacccgcgcctggatatggggcgtctacgtcgtcccagaagcagcagcagccac
aggaacctgccgcatctgtttctgtttctcctcttcgtgggacccttcaactgcctggcg
agttacagccgcgccacagagcttctgtacagcctgaacgagggactgcccgcgggagtg
ctcatcgggagcctggcggaggacctgcggctggtgccccgcgccgccagcagacaggac
cagcattcgcagtctccagagcgcaccagggccgagtggaatccgcctctctctttcagc
ctggcctccagcggactgagcggccagtatgtgaccctagacaaccgctctggggagctg
cacacttctgcccaggagatcgacagggaggccctgtgtcttgaccgaggtggagaggct
gcctggggcggcagcgtttccatctcttcctctccatcctctgactcttgccttttactt
ctggatgtgcttgtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgccatc
agggatatcaacgacaacgccccccagtttcctgtttcccaaatttctgtttgggtccca
gaaaatgcacctgtaaacacccggctggccatagagcatcctgctgtggacccagatata
ggcactaacggggtgcaaacctatcgcttactggactaccatggcatgttcaccctggac
gtggaagagaatgagaatggggagcgcaccccctacctgattgtcatgggctctttggac
agagaaacccaggaccagtacgtaagcatcatcattgctgaggacggtgggtctccacca
ctgttgggcagtgccacgctcaccatcggcataagtgacattaatgacaattgccctcta
ttcatagactcacaaatcaatgtcactgtctatgggaatgctacagttggtacccctatt
gcagctgtccaggctgtggacagagacttggggaccaatgctcaaatcacctacacttat
agccagaaagttccacaagcatccaaggatttgttccatctggatgaaaccacaggagtc
ataacacttttcagtaagattggaggaagtgttctacaaatgcataagctcaccattctt
gcgaatggaccgggctgcatccctgctgtgatcacggctctagtgtctgttatcaaagtc
atcttcagaccacctgaaatagttcctcgttacatagccaatgagatagatggtgtggtc
tatctgaaagaactggaacctgtgcacacacctgttgcgtttttcaccataagagatccg
gaagataaatacaaggtcaactgctacctggacggtgaagggccatttaggttatcaccc
tacaagccgtacaataatgaatatttgctagagactacaaaaccaatggactatgagctg
cagcagttttatgaaatagctgtggtggcctggaattctgaaggatttcatgtcaagaga
atcatcaaagtgcaacttttagatgacaatgataatgctcctgttttcctacaacccttg
atagaactaaccattgaagaaaataatgcacccaatgcctttttgaccaagctgtatgcc
acagatgctgacagtggagagagaggccaagttttgtattttctgggacctgatgctcca
tcctatttttccttagacaatgtcacggggattctgacagtctctacccagctggatcga
gaagagaaagaaaagtacaggtacaccgtcagagctgttgactgtggaaagccacccaga
gaatcagtagccactgtggctctcacagtgttggataaaaatgacaacagccctaggttt
atcaacaaagacttcagcttttttgtgccagaaaattttccaggatatggtgagattgga
gtgatcagtgttacggatgcagatgctgggcgaaatggatgggtggccctctcggtggtg
aaccagagcgatatttttgtcatagatacaggaaaaggtatgttgagagcaaaagtctct
ttggacagagagcagcaaagctcttacaccttgtgggttgaagctgttgatgggggtgag
cctgccctctcctctaccacaaaaatcacaattctccttctagatatcaatgacaaccct
cctcttgttttatttcctcagtcgaatatgtcttatttgttggtactgccatctactctg
cctggctccccagtcaccgaggtctatgctgtggacaaagacacgggcatgaatgctgtc
atagcttacagcatcataggcagaagagggcctaggcctgagtccttccggattgaccct
aaaactggcaacatcactttggaagaggccttgctgcagacggattatgggctccatcgc
ttactggtgaaagtgagcgaccacggttaccctgagcctctccattccacagtcatggta
aacctgtttgtcaatgacacagtcagtaatgagagctacattgagagtcttttaagaaag
gaaccagaaattaacatagaggagaaagaaccacaaatttcaatagaaccaactcatagg
aaggtagaatccttatcctgcatgcccaccttagtagctctgtctgtgataagcttgggt
tccatcacacttgtgacaggcatgggcatatacatctgcttaaggaaagagaagaagcct
catagggaagatgacaatttggaagtacaaatcccactaaaaggaaaaattgacttgcac
atgagagagaggaaaccaatgcatatttctaatatttga

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