Oryctolagus cuniculus (rabbit): 100345334
Help
Entry
100345334 CDS
T03373
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100345334
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
100345334
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100345334
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100345334
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
100345334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100345334
NCBI-ProteinID:
XP_002713025
Ensembl:
ENSOCUG00000016877
UniProt:
G1TMK1
LinkDB
All DBs
Position
8:48703984..48711959
Genome browser
AA seq
952 aa
AA seq
DB search
MRGRGNARSPRALAVSWRPATWHPRLDMGRLRRPRSSSSHRNLPHLFLFLLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAASRQDQHSQSPERTRAEWNPPLSFS
LASSGLSGQYVTLDNRSGELHTSAQEIDREALCLDRGGEAAWGGSVSISSSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDI
GTNGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGSLDRETQDQYVSIIIAEDGGSPP
LLGSATLTIGISDINDNCPLFIDSQINVTVYGNATVGTPIAAVQAVDRDLGTNAQITYTY
SQKVPQASKDLFHLDETTGVITLFSKIGGSVLQMHKLTILANGPGCIPAVITALVSVIKV
IFRPPEIVPRYIANEIDGVVYLKELEPVHTPVAFFTIRDPEDKYKVNCYLDGEGPFRLSP
YKPYNNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKRIIKVQLLDDNDNAPVFLQPL
IELTIEENNAPNAFLTKLYATDADSGERGQVLYFLGPDAPSYFSLDNVTGILTVSTQLDR
EEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESLSCMPTLVALSVISLG
SITLVTGMGIYICLRKEKKPHREDDNLEVQIPLKGKIDLHMRERKPMHISNI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaatgcgcgcagcccgcgagccctggcagtgagctggcgcccggcg
acctggcacccgcgcctggatatggggcgtctacgtcgtcccagaagcagcagcagccac
aggaacctgccgcatctgtttctgtttctcctcttcgtgggacccttcaactgcctggcg
agttacagccgcgccacagagcttctgtacagcctgaacgagggactgcccgcgggagtg
ctcatcgggagcctggcggaggacctgcggctggtgccccgcgccgccagcagacaggac
cagcattcgcagtctccagagcgcaccagggccgagtggaatccgcctctctctttcagc
ctggcctccagcggactgagcggccagtatgtgaccctagacaaccgctctggggagctg
cacacttctgcccaggagatcgacagggaggccctgtgtcttgaccgaggtggagaggct
gcctggggcggcagcgtttccatctcttcctctccatcctctgactcttgccttttactt
ctggatgtgcttgtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgccatc
agggatatcaacgacaacgccccccagtttcctgtttcccaaatttctgtttgggtccca
gaaaatgcacctgtaaacacccggctggccatagagcatcctgctgtggacccagatata
ggcactaacggggtgcaaacctatcgcttactggactaccatggcatgttcaccctggac
gtggaagagaatgagaatggggagcgcaccccctacctgattgtcatgggctctttggac
agagaaacccaggaccagtacgtaagcatcatcattgctgaggacggtgggtctccacca
ctgttgggcagtgccacgctcaccatcggcataagtgacattaatgacaattgccctcta
ttcatagactcacaaatcaatgtcactgtctatgggaatgctacagttggtacccctatt
gcagctgtccaggctgtggacagagacttggggaccaatgctcaaatcacctacacttat
agccagaaagttccacaagcatccaaggatttgttccatctggatgaaaccacaggagtc
ataacacttttcagtaagattggaggaagtgttctacaaatgcataagctcaccattctt
gcgaatggaccgggctgcatccctgctgtgatcacggctctagtgtctgttatcaaagtc
atcttcagaccacctgaaatagttcctcgttacatagccaatgagatagatggtgtggtc
tatctgaaagaactggaacctgtgcacacacctgttgcgtttttcaccataagagatccg
gaagataaatacaaggtcaactgctacctggacggtgaagggccatttaggttatcaccc
tacaagccgtacaataatgaatatttgctagagactacaaaaccaatggactatgagctg
cagcagttttatgaaatagctgtggtggcctggaattctgaaggatttcatgtcaagaga
atcatcaaagtgcaacttttagatgacaatgataatgctcctgttttcctacaacccttg
atagaactaaccattgaagaaaataatgcacccaatgcctttttgaccaagctgtatgcc
acagatgctgacagtggagagagaggccaagttttgtattttctgggacctgatgctcca
tcctatttttccttagacaatgtcacggggattctgacagtctctacccagctggatcga
gaagagaaagaaaagtacaggtacaccgtcagagctgttgactgtggaaagccacccaga
gaatcagtagccactgtggctctcacagtgttggataaaaatgacaacagccctaggttt
atcaacaaagacttcagcttttttgtgccagaaaattttccaggatatggtgagattgga
gtgatcagtgttacggatgcagatgctgggcgaaatggatgggtggccctctcggtggtg
aaccagagcgatatttttgtcatagatacaggaaaaggtatgttgagagcaaaagtctct
ttggacagagagcagcaaagctcttacaccttgtgggttgaagctgttgatgggggtgag
cctgccctctcctctaccacaaaaatcacaattctccttctagatatcaatgacaaccct
cctcttgttttatttcctcagtcgaatatgtcttatttgttggtactgccatctactctg
cctggctccccagtcaccgaggtctatgctgtggacaaagacacgggcatgaatgctgtc
atagcttacagcatcataggcagaagagggcctaggcctgagtccttccggattgaccct
aaaactggcaacatcactttggaagaggccttgctgcagacggattatgggctccatcgc
ttactggtgaaagtgagcgaccacggttaccctgagcctctccattccacagtcatggta
aacctgtttgtcaatgacacagtcagtaatgagagctacattgagagtcttttaagaaag
gaaccagaaattaacatagaggagaaagaaccacaaatttcaatagaaccaactcatagg
aaggtagaatccttatcctgcatgcccaccttagtagctctgtctgtgataagcttgggt
tccatcacacttgtgacaggcatgggcatatacatctgcttaaggaaagagaagaagcct
catagggaagatgacaatttggaagtacaaatcccactaaaaggaaaaattgacttgcac
atgagagagaggaaaccaatgcatatttctaatatttga
DBGET
integrated database retrieval system