KEGG   Oryctolagus cuniculus (rabbit): 100345366
Entry
100345366         CDS       T03373                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03410  Base excision repair
ocu03420  Nucleotide excision repair
ocu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100345366
   03410 Base excision repair
    100345366
   03420 Nucleotide excision repair
    100345366
   03430 Mismatch repair
    100345366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100345366
   03036 Chromosome and associated proteins [BR:ocu03036]
    100345366
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100345366
DNA replication proteins [BR:ocu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100345366
  DNA Replication Termination Factors
   ELG1-RFC complex
    100345366
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100345366
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100345366
  Check point factors
   HRAD17(Rad24)-RFC complex
    100345366
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_11 AAA_22 AAA_16 RuvB_N AAA_assoc_2 nSTAND_NTPase5 DEAD DUF815 AAA_14 ResIII AAA_lid_RFC1 AAA_5 TIP49 AAA_19 ATPase_2 AAA_30 PhoH TniB AAA_7 nSTAND3 IstB_IS21 Thioredoxin_6 DNAX_ATPase_lid bpMoxR NPHP3_N AAA_3 AAA_28
Other DBs
NCBI-GeneID: 100345366
NCBI-ProteinID: XP_051682834
Ensembl: ENSOCUG00000010377
LinkDB
Position
21:complement(14855106..14865686)
AA seq 340 aa
MESSAVQQQEQPAAAKMRNLPWVEKYRPQTLNDLISHRDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEEEKVYVSEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNIMELKTVKGLALHDILTEIHLFVHRVDFPSSVRIH
LLTKMADIEYRLAVGTNEKIQLSSLIAAFQVTRDLIVADA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagagctcagccgtccagcagcaggagcagcccgcggcggccaagatgcggaacctg
ccgtgggtcgaaaagtaccggccacagacactgaacgatctcatttctcaccgggacatc
ctgagtaccattcagaaattcattagtgaagaccgactgccacacctgcttctctacggc
cctccggggacaggaaagacgtccaccatcctcgcctgtgctaaacagctgtacaaagac
aaagaattcggctccatggtcttggagctgaatgcgtcggacgaccgaggaattgatatc
gttcggggaccaatcctgagctttgctagcacaaggacaatatttaagaagggcttcaag
ctggtgatcttggatgaagctgatgccatgactcaggacgcccagaatgccttgcgaaga
gtgattgagaaattcaccgaaaacaccaggttctgcctcatctgtaactacctgtccaag
atcatccccgccttgcagtcccggtgcacgcggttccgattcgggcccctgacgccggaa
ctcatggtcccgcgcctggaacacgtggtggaggaggagaaggtctatgtcagtgaagac
ggcatgaaagctctcataactctgtcgagcggggacatgcggagagccctgaacattctg
cagagcaccaacatggccttcgggaaggtgacggaggagaccgtgtacacctgcacgggg
cacccgctcaagtccgacatcgccaacattctggactggatgttgaatcaagacttcacc
acagcctacaggaatatcatggagttgaaaaccgtgaaggggttggcgctgcatgacatc
ctgacggagatccacttgtttgtgcacagagttgacttcccgtcgtcagttcgaatacac
ctgctgactaaaatggcagatattgagtacagacttgctgttggcaccaacgagaagatc
cagctgagctccctcatcgctgcttttcaagtcaccagggacctgattgtggcagacgcc
tag

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