Oryctolagus cuniculus (rabbit): 100345366
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Entry
100345366 CDS
T03373
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03030
DNA replication
ocu03410
Base excision repair
ocu03420
Nucleotide excision repair
ocu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100345366
03410 Base excision repair
100345366
03420 Nucleotide excision repair
100345366
03430 Mismatch repair
100345366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocu03032
]
100345366
03036 Chromosome and associated proteins [BR:
ocu03036
]
100345366
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100345366
DNA replication proteins [BR:
ocu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100345366
DNA Replication Termination Factors
ELG1-RFC complex
100345366
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100345366
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100345366
Check point factors
HRAD17(Rad24)-RFC complex
100345366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_11
AAA_22
AAA_16
RuvB_N
AAA_assoc_2
nSTAND_NTPase5
DEAD
DUF815
AAA_14
ResIII
AAA_lid_RFC1
AAA_5
TIP49
AAA_19
ATPase_2
AAA_30
PhoH
TniB
AAA_7
nSTAND3
IstB_IS21
Thioredoxin_6
DNAX_ATPase_lid
bpMoxR
NPHP3_N
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
100345366
NCBI-ProteinID:
XP_051682834
Ensembl:
ENSOCUG00000010377
LinkDB
All DBs
Position
21:complement(14855106..14865686)
Genome browser
AA seq
340 aa
AA seq
DB search
MESSAVQQQEQPAAAKMRNLPWVEKYRPQTLNDLISHRDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEEEKVYVSEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNIMELKTVKGLALHDILTEIHLFVHRVDFPSSVRIH
LLTKMADIEYRLAVGTNEKIQLSSLIAAFQVTRDLIVADA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcagccgtccagcagcaggagcagcccgcggcggccaagatgcggaacctg
ccgtgggtcgaaaagtaccggccacagacactgaacgatctcatttctcaccgggacatc
ctgagtaccattcagaaattcattagtgaagaccgactgccacacctgcttctctacggc
cctccggggacaggaaagacgtccaccatcctcgcctgtgctaaacagctgtacaaagac
aaagaattcggctccatggtcttggagctgaatgcgtcggacgaccgaggaattgatatc
gttcggggaccaatcctgagctttgctagcacaaggacaatatttaagaagggcttcaag
ctggtgatcttggatgaagctgatgccatgactcaggacgcccagaatgccttgcgaaga
gtgattgagaaattcaccgaaaacaccaggttctgcctcatctgtaactacctgtccaag
atcatccccgccttgcagtcccggtgcacgcggttccgattcgggcccctgacgccggaa
ctcatggtcccgcgcctggaacacgtggtggaggaggagaaggtctatgtcagtgaagac
ggcatgaaagctctcataactctgtcgagcggggacatgcggagagccctgaacattctg
cagagcaccaacatggccttcgggaaggtgacggaggagaccgtgtacacctgcacgggg
cacccgctcaagtccgacatcgccaacattctggactggatgttgaatcaagacttcacc
acagcctacaggaatatcatggagttgaaaaccgtgaaggggttggcgctgcatgacatc
ctgacggagatccacttgtttgtgcacagagttgacttcccgtcgtcagttcgaatacac
ctgctgactaaaatggcagatattgagtacagacttgctgttggcaccaacgagaagatc
cagctgagctccctcatcgctgcttttcaagtcaccagggacctgattgtggcagacgcc
tag
DBGET
integrated database retrieval system