Oryctolagus cuniculus (rabbit): 100345373
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Entry
100345373 CDS
T03373
Name
(RefSeq) protocadherin-19 isoform X6
KO
K16499
protocadherin delta 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100345373
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
100345373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
100345373
NCBI-ProteinID:
XP_008271369
Ensembl:
ENSOCUG00000015865
LinkDB
All DBs
Position
X:88939506..89062875
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AA seq
1148 aa
AA seq
DB search
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQINGEVRTTRTFSESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
ITCLLGCFIKGQNSKCLHCISVSPISEEQDKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGK
DVSDHPTEERPTLKGKRTVDVTICSPKVNGAIREAGNGCEAISPITSPLHLKSPLPTKPS
VSYTVALAPPARDLEQYVNNVNNGPSRPSEAEPRGADSEKVMHEVNPILKEGCDKESPGV
KRLKDIVL
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctcctgctgccggtgttgctgctgctggccgttttgtggacgcaggcggcc
gctctcattaacctcaaatactcggtagaagaggagcagcgcgccgggacggtgatagcc
aacgtggccaaggacgcacgggaggcgggcttcgcgttggacccccggcaggcctcggcc
ttccgcgtggtgtccaactcggctcctcacctggtggacatcaaccccagttccggcctg
ctggtcactaagcagaagatcgaccgagacctcctgtgccgccagagtcccaagtgcatc
atctcgctagaggtcatgtccagttcaatggagatctgcgtgattaaggtggagatcaag
gacttgaacgacaacgcgcccagtttcccggcggcacagatcgagttggagatctcggag
gcggccagccccggcacgcgcatcccgctggacagcgcctatgatccggactcgggcagt
tttggcgtgcagacttacgagctcacgcccaatgagctgttcggcctggagatcaagacg
cgtggcgacggttcacgctttgccgaactagtggtggagaagagcctggaccgtgagaca
cagtctcactacagctttcgcatcacggcactcgacgggggcgacccgccgcacctgggc
actgttggcctcagcatcaaggtgaccgactccaatgacaacaacccggtgttcggcgag
tccacctacgcggtgagtgtgccagagaactcgcctccgaacacacctgtcatccgcctc
aatgccagcgacccagatgagggcaccaacggccaggtggtgtactccttctatggctac
gtgaatgaccgtacgcgggagcttttccagattgacccacatagcggcctggtcactgtc
accggtgccctagactacgaagagggccacgtgtatgaactggacgtgcaagccaaggac
ctgggacccaactccatcccggcacactgcaaagtcaccgtcagcgttctggacacgaac
gacaacccgccggtcatcaacctgctgtctgtcaacagtgagcttgtggaggtgagcgag
agcgcccccccgggctacgtgattgcactagtgcgggtgtctgatcgcgactccggcctc
aatggacgcgtacagtgccgtttgctgggcaacgtgccctttcggctgcaggagtacgag
agtttctccactatcctggtggacggacggctggatcgcgagcaacacgatcagtacaac
ctcacgattcaggcccgcgacggcggcgtgcccatgctgcagagtgccaagtcctttacc
gtgcgtatcactgacgagaacgacaaccacccccacttctccaagccttactaccaagtc
atcgtgcaggagaacaacacgcccggcgcttatctgctctccgtgtctgcccgagacccc
gacctggggctcaacggcagtgtctcctaccagattgtgccgtcgcaggtgcgggatatg
cctgtcttcacctacgtctccattaaccccaactcgggtgatatctacgcactgcgatcc
ttcaaccacgagcagaccaaggcgttcgagttcaaggtgctagccaaagacggcggcctg
ccctcgctgcagagtaacgccacagtgcgagtcatcatcctcgacgttaatgataatacc
ccggtcatcacggccccgcccctgatcaatggcactgccgaggtctacatcccccgaaac
tccggcataggctacctggtgaccgttgtcaaggcagacgactacgacgagggtgaaaac
ggccgagtcacctatgacatgaccgagggtgaccgcggcttctttgaaatagaccaaatc
aatggcgaagtcagaaccacccgcaccttcagcgagagctccaaggcttcctatgagctt
atcgtggtggcccacgaccatggcaagacatctctctctgcctctgcgctggtccttatc
tacctgtcacctgctctcgatgcccaagaatcaatgggctcggtgaacctgtcgctgatt
ttcattatagccctgggctccattgccggcatcctctttgtcactatgatcttcgtggca
atcaagtgcaagcgagacaacaaagagatccggacctacaactgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcagtttctcccattagcgaggagcaagacaaaaaggcagaggagaaagtgagcctaagg
ggaaagagaatcgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgcctggtaccccgggatgtggaggagacagacaagatgaac
gttgtcagttgctcctccctgacctcctccctcaactatttcgactaccaccagcagacg
ctgcccctgggctgccgccgctctgagagcactttcctgaacgtggagaaccagaatacc
cgcaataccagcgctaaccacatctaccatcactctttcaacagccagggcccccagcag
ccagacctgatcatcaacggcgtgcctctgccggagactgaaaactattcttttgactcc
aactatgtgaacagccgagcccatttaatcaaaagcagctccaccttcaaggacttagag
ggcaacagcctgaaggatagtggacatgaagagagtgaccagactgacagcgaacatgat
gtccagcggagcctgtattgtgatactgctgtcaatgatgtgctaaacaccagtgtgacc
tccatgggatctcagatgcctgaccatgatcagaatgaaggatttcattgcagggaagaa
tgccggattcttggccactctgacaggtgctggatgccccggaaccccatgccaacccgc
tccaagtcccctgagcacgtgaggaacatcatcgcgctgtccattgaggctactgctgcc
gacgttgaggcttacgacgactgcggcccaaccaagcggacttttgcaacctttgggaaa
gatgtcagcgaccacccgacagaggagaggcccaccctgaaaggcaagaggactgtggat
gtgaccatctgcagccccaaggtcaacggcgctatccgggaggccggcaatggctgtgag
gctattagccccatcacctcccctctccacctcaagagccctctgcctaccaagccttct
gtgtcttacacggttgccctggctcccccagcccgtgatctggagcagtatgtcaacaat
gtcaacaatggcccttctcgcccctctgaagctgagccccgtggagctgacagcgagaaa
gtcatgcatgaggtcaaccccattctgaaggagggttgtgacaaagagtcccctggcgtg
aagcgtctgaaggatatcgttctctaa
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