Oryctolagus cuniculus (rabbit): 100345423
Help
Entry
100345423 CDS
T03373
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04621
NOD-like receptor signaling pathway
ocu05132
Salmonella infection
ocu05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100345423
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100345423
05133 Pertussis
100345423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ocu04054
]
100345423
Pattern recognition receptors [BR:
ocu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100345423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
100345423
NCBI-ProteinID:
XP_002713781
Ensembl:
ENSOCUG00000005277
UniProt:
G1SNK2
LinkDB
All DBs
Position
10:complement(11865588..11913271)
Genome browser
AA seq
953 aa
AA seq
DB search
MEKQGHSEMEITPSDSRSHVKLLKIHRELLVTHIHNTQCLVDNLLKNDYFSTEDAEIVCA
CPTQPDKVRKILDLVQSKGEEVSEFFLYILQQLTDAYVDLRPWLSDVGFIPSPLIQSKAI
VNTDPVSRYTQKLRHQLGCDSKFMLCYSKKEEMLLEETYTDTIMELISFNNESLGSLGSP
ACLLDQSAGVLNEQAETVFVFGDAGVGKSMLLQRLQSLWASGRLDAGVKFFFHFRCRMFS
CFKESATLCLQDLLFKHCCYPEQDPDEVFAFLLRFPHTALFTFDGLDELHSDFDLSRVPD
SCCPWEPAHPLVLLASLLSGKLLKGASKLLTARTGVEVPRQLLRKKVLLRGFSPSHLRTY
AHRMFPERAARERLLEQLEANPNLCSLCAVPLFCWIIFRCFQHFHTTLDGSSQLPDCTVT
LTDVFLLVTEVHLNRTQPSSLVQRNTRSPEETFQAGRGSLLALGRAAYGAMAKSLFVFSQ
EQVQACGVQEEDLQLGFLRAVPELGSEGGQQSYEFFHITLQAFFTAFFLVVDDEVGTPEL
LAFFHEWVPPGEVAAASCYPRFLPFWRVGGSGPVRADPFKKKDHFQFTNLFLCGLLSKAK
QKLLQHLVPLASLRRKRKALWAHLFASLRTYLKNLPRVQSGGFNQVQAMPTFLWMLRCIY
ETQSRKVGQLAAGGICANYLKLTYCNACSADCSALSFVLHHSRKRLALDLDNNNLNDYGV
RELQPCFSCLTVVRLSVNQITDSGVKVLCEELTKYKILTYLGLYNNQITDVGAKYVAKIL
DECRSLTHIKLGKNKITSEGGKCLALAVKHSSSIVDIGMWGNQIGDEGAKAFAEALRNHT
SLRNLSLAFNGITSEGGRSLAQALHCNTSLQIFWLTKNELNDDVAESMADMLKVNQTLKH
LWLIQNQITARGTAQLAEALRQNTGILEICLNGNLMQPEEAEAFAEEKRLICF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcagggccacagtgagatggaaataaccccgtccgattctcgttcccacgtc
aagctgctgaaaatccaccgggaacttctggtcacccacatccataacacccagtgtctg
gtggacaacttactgaagaacgactacttctccacggaagatgcagagattgtgtgcgcc
tgccccacgcagcccgacaaggttcgcaaaatcctggacctggtgcagagcaagggcgag
gaggtgtcggagttcttcctgtacatcttgcagcagctcacagatgcttacgtggacctc
aggccgtggctgtcggacgtgggcttcatcccttccccgctcattcagagcaaagccatt
gtcaacaccgacccagtgagcagatacacccagaagctgcgccaccagctaggctgtgac
tccaagttcatgctgtgctacagcaagaaggaggagatgctgctggaggagacgtacacc
gacaccatcatggagctgatcagcttcaacaacgagagcctgggcagcctgggcagcccg
gcctgcctgctggaccagagcgcgggcgtcctcaacgagcaggccgagaccgtgttcgtc
ttcggggacgccggggtgggcaagtccatgctgctgcagcggctgcagagcctgtgggcc
tcgggccggctggacgcaggggtcaagttcttcttccacttccgctgccgcatgttcagc
tgcttcaaggagagcgccacgctgtgtctgcaggatctgctcttcaagcactgctgctac
ccggagcaggacccggacgaggtgttcgccttcctgctgcgctttccccacaccgcgctc
ttcaccttcgacggcctggacgagctgcactcggacttcgacctgagccgcgtgcctgac
agctgctgcccctgggagcccgcgcaccccctggtcctgctggccagcctgctcagtggg
aagctgctcaagggcgccagcaagctgctcacggcgcgcacgggcgtcgaagtcccgcgc
cagctcctgcggaagaaggtgctgctccggggcttctcgcccagccacctgcgcacctac
gcccacaggatgttcccggagcgggcggcgcgggagcgcctgctggagcagctcgaggcc
aaccccaacctgtgcagcctgtgcgccgtgcccctcttctgctggatcatctttcgctgc
ttccagcacttccataccaccctcgacggctcctcacagctgccggactgcacggtgacc
ctgaccgacgtcttcctgctggtcaccgaggtgcacctgaacaggacgcagcccagcagc
ctggtgcagcgcaacacacgcagccccgaggagaccttccaggccggccgcggcagcctg
ctggcgctgggacgggcggcctacggggccatggccaagagcctgtttgtcttcagccag
gagcaggtgcaggcctgcggtgtgcaggaggaggacctgcagctgggcttcctgcgggcc
gtgccggagctgggcagcgagggcggtcagcagtcctatgagttcttccacatcaccctg
caggccttcttcactgccttctttctcgtggtggatgacgaggtgggcacgccggagctg
ctcgccttcttccacgagtgggtgcccccgggggaggtggcggccgcctcctgctatccc
cgattcctccctttctggcgcgtggggggcagtggcccggtcagagcagaccccttcaag
aagaaggatcacttccagttcaccaacctcttcctgtgtgggctgctgtccaaagccaag
cagaaactcctgcagcacctggtgcccctggcgagcctgaggaggaagcgcaaggccctg
tgggcacacctgtttgccagcctgcggacctacctgaagaacctgccccgggtgcagtct
gggggcttcaaccaggtgcaggccatgcccaccttcctgtggatgctgcgctgcatctac
gagacacagagccggaaggtggggcagctggcggccggcggcatctgcgccaactacctc
aagctgacctactgcaacgcctgctcggctgactgcagcgccctctccttcgtcctgcac
cactcccgcaagcgcctggccctcgacctggacaacaacaacctcaacgactacggcgtg
cgggagctgcagccctgcttcagctgcctcaccgtcgtcagactcagtgtgaaccagatc
actgacagcggggtgaaggtgctgtgtgaagagctgaccaagtacaaaatcctgacgtac
ttgggtttgtacaacaaccagatcacggacgtcggagccaagtacgtcgccaagatcctg
gatgagtgcagaagcctcacgcacattaaactgggaaaaaacaaaataacgagcgaagga
ggcaagtgcctggcgctggcggtgaagcacagcagctccatcgttgatatcgggatgtgg
ggcaatcagatcggggatgaaggcgccaaagccttcgcggaggccctgaggaaccacacc
agcctgagaaacttgagcctcgcgttcaacggcatcacctcagaaggaggaaggagcctc
gcccaggccctgcattgcaacacgtctctgcaaatattttggctgaccaaaaatgaactc
aacgatgacgtggcagagagcatggcggacatgctgaaggtcaaccagacgctgaagcac
ttatggctcatccagaaccagatcacagccagggggacggcccagctggcggaggccttg
cgccagaacaccggcatcctggagatctgcctgaatggaaacctgatgcagcccgaggag
gcagaagcctttgcggaggagaagaggctcatctgtttctga
DBGET
integrated database retrieval system
