Oryctolagus cuniculus (rabbit): 100345434
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Entry
100345434 CDS
T03373
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04340
Hedgehog signaling pathway
ocu05200
Pathways in cancer
ocu05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100345434
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100345434
09162 Cancer: specific types
05217 Basal cell carcinoma
100345434
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Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
100345434
NCBI-ProteinID:
XP_002715724
Ensembl:
ENSOCUG00000012489
LinkDB
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Position
13:121893329..121907865
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AA seq
1202 aa
AA seq
DB search
MARPPPPGYTPPARSAAPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLFLGLLA
FGALALGLRVAIIETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTARQEGES
ILTPEALSLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKLFPCVI
LTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDKAQVGQ
AYVGRPCLHPDDLHCPPSAPNHHSRQAPNVAQELSGGCHGFSHKFMHWQEELLLGGTARD
PQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFVQLAQE
ALPENASQQIHAFSSTTLDDMLRAFSEVSAARVLGGYLLMLAYACVTMLRWDCAQSQGAV
GLAGVLLVALAVASGLGLCALLGISFNAATTQVLPFLALGIGVDDIFLLAHAFTEAPPGT
PLQERTGECLQRTGTSVALTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLV
FPAVLSLDLRRRHCQRLDVLCCFSSPCSARVIQILPQELGDGTVPVGVAHLTTTVQAFTH
CEASSQHVVTILPPQAHLVPPSSDPLGSELFSPGGSTRDLLGQDEGTRQKPAHKSLPCVR
WNLAHFARYQFAPLLLQSRAKAAVLVLFGALLGLSLYGATLVQDGLALTDVVPRGTKEHA
FLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPAPQAPRTWLHYY
RNWLLGIQAAFDQDWASGRITRHSYRNGSEDGALAYKLLIQTGDAQEPLDFSQLTTRRLV
DKEGLIPPELFYVGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQPL
EFAQFPFLLRGLRKTADFVEAIEGARAACAEAGRAGVRAYPSGSPFLFWEQYLGLRRCFL
LAVCILLVCTFLVCALLLLNPWTAGLIVLVLAMMTMELFGIMGFLGIKLSAIPVVILVAS
VGIGVEFTVHVALGFLTAQGSRNLRAARALEHTFAPVTDGAVSTLLGLLMLAGSNFDFIV
RYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEVMQMYKESPEALSPTAPREGGLRWGI
SPTLPQSFARVTTSMTVALHPPPLPGAYIHAASDEPTWSPATTPAASGPGSPNSRGPCPA
TE
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaccgccgccccctggctacacgcccccagctcggtccgcagcaccccagatc
ctagctgggagcctgaaggctcctctctggctccgggcttacttccagggcctgctcttc
tctctgggctgcgggatccagagacactgtggcaaagtgctcttcctgggactgttggcc
tttggggccctggcactgggtctccgcgtggccattattgagacagacctggaacagctc
tgggtagaagtaggcagccgggtgagccaggagctgcattacaccaaagagaagctggga
gaggaggccgcttacacctcccagatgctgatacagaccgcccgccaggaaggggagagc
atcctcacgcctgaggcactcagcctccacctccaggcagccctcactgccagcaaagtg
caagtgtcactctacggaaagtcgtgggatctgaacaaaatctgctacaagtcaggagtt
cctctcatcgaaaatggcatgattgagcggatgatcgagaagctgttcccctgcgtgatc
ctgacgcccctcgactgcttctgggagggagccaaactccagggcggctctgcctacctg
ccgggccgccctgacatccagtggaccaacctggatcctgagcagctgctggaggaactg
ggccccttcgcctcccttgagggcttccgggagctgctagacaaggcgcaggtgggccag
gcctacgtggggcggccctgtctgcacccagacgacctccactgcccacccagtgcgccc
aaccatcacagcaggcaggctcctaacgtggctcaggagctgagcgggggctgccacggc
ttctcccacaaattcatgcactggcaggaggaattgctgctgggaggcacggccagagac
ccccaagggcagctgctgagggcagaggccctgcagagcaccttcctgctgatgagcccc
cgccagctgtacgagcacttccggggcgactaccagacacatgacatcggctggagcgag
gagcaggccggcacggtgctgcaggcctggcagcggcgctttgtgcagctggcccaggag
gccctgcccgagaacgcctcccagcagatccacgccttctcctccaccaccctggacgac
atgctgcgagcgttctcggaagtcagcgccgcgcgcgtgctgggaggctatctgctcatg
ctggcctatgcctgcgtgacaatgctacggtgggactgtgcccagtcccagggtgctgtg
ggccttgccggggtgctgctggtggccctggccgtggcctcaggtctcgggctgtgcgcc
ctgctcggtatctccttcaatgctgccactacccaggtgctgcccttcttggcactgggc
atcggcgtggatgacatattcctgctggcgcacgccttcacagaggctccacccggcacc
cctctccaggagcgcacaggtgagtgtctgcagcgcacaggcaccagtgtcgccctcacg
tccatcaacaacatggtcgccttcttcatggctgccctggttcccatccccgccctgagg
gccttctccctgcaggcagccatagtggttggctgcaactttgcagccgtgatgcttgtc
ttcccagccgtcctcagcctggacctgcgccggcgccactgccagcgccttgacgtcctc
tgctgcttctctagcccctgctctgctcgagtgattcagattctgccccaggagctgggg
gacgggacagtaccggtgggcgttgcccacctcaccaccacggttcaagcctttacccac
tgtgaagccagcagccagcatgtagtcaccatcctacctcctcaagcccacctggtgccc
ccctcttctgacccactgggctctgagctcttcagccctggaggatccacgcgggacctt
ctaggccaggacgagggcacgaggcagaagccggcacacaagtccctgccctgcgttcgc
tggaatcttgcccatttcgcccgctatcagtttgcacccttactgctgcagtcacgtgct
aaggccgcagtgctggtgctgtttggggctcttctgggcctgagcctctacggagccacc
ttggtgcaggacgggctggccctgacagatgtggtgcctcggggcaccaaggagcatgcc
ttcctgagcgcccagctcaggtacttctccttgtacgaggtggccctggtgacccagggc
ggctttgactacgcccactcccaacgcgccctctttgatctgcaccagcgcttcagttcc
ctcaaggctgtgctgcccccacctgccccccaggcgcctcgcacctggctgcactattac
cgcaactggctgctgggaatccaggctgcatttgaccaggactgggcttccggccgcatt
acccgccactcataccgcaatggctctgaggacggggcactggcctacaagctgctcatc
cagactggggatgcccaggagcctctggatttcagccagctgaccacaaggaggctggtg
gacaaggaggggctcatcccacccgaactcttctacgtggggctaaccgtgtgggtgagc
agtgaccccctggggctggcagcctcccaggccaacttctaccccccacctcccgaatgg
ctgcatgataaatacgacaccaccggggagaacctgcgcatccctgcagcccagccgctg
gagtttgcccagttccccttcctgctgcgcggcctccggaagactgcagacttcgtggag
gccatcgagggagcccgggcagcgtgtgcagaggcaggccgggctggggtgcgcgcctac
cccagcggctcccccttcctcttctgggagcaatacctgggcctgcgacgctgcttcctg
ctggctgtttgcatcctgctggtgtgcaccttccttgtctgtgccctgctgctgcttaac
ccctggacagctggactcatcgtgctggtcctggcgatgatgaccatggagctctttggt
atcatgggtttcctgggcatcaagctgagcgccatccccgtggtgatcctcgtggcttcc
gtaggcatcggtgtcgagttcacagtccacgtggctctgggcttcctgacagcccaggga
agccggaacctgcgggctgcccgtgccctggagcacacatttgcccccgtgaccgatgga
gctgtctccacactgctgggtctcctcatgcttgctggttccaacttcgacttcatcgta
aggtacttcttcgtggtgctgacagtgctcacgctcctgggcctcctgcacggacttgtg
ctgctgcctgtactgctgtccatcctgggcccacccccagaggtgatgcagatgtacaag
gagagcccggaggccctgagccccacagctccacgggaaggcgggctcaggtgggggata
tcccccaccctgccccagagtttcgccagagtgactacctccatgaccgtggccctccac
ccacctccgctgcctggtgcctatatccacgccgcctctgacgagcccacttggtcccct
gctaccaccccagctgccagcgggcctggcagccccaattctagaggaccctgtccggcc
actgagtga
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