Oryctolagus cuniculus (rabbit): 100345599
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Entry
100345599 CDS
T03373
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100345599
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100345599
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
ATPase_2
Aq_aa27
nSTAND_NTPase5
Rad17
CobU
Motif
Other DBs
NCBI-GeneID:
100345599
NCBI-ProteinID:
XP_051712311
Ensembl:
ENSOCUG00000016238
LinkDB
All DBs
Position
13:complement(89927095..90014260)
Genome browser
AA seq
817 aa
AA seq
DB search
MASIDLKSPQIILSQFADNTTYAKVITKLKILSPLEIIMSNTACVVGNSTKLFTLITENF
KNVNFTTVQRKYFNETKGLEYIEQFCTAEFSTVLMEVQSKYYCLAAVAALLKYVEFIQNS
VYAPKSLKICFQGSEQTAMIDSSSAQNLELLVNNQDCRNNHTLFGVLNYTKTPGGSRRLR
SNILEPLVDIETINMRLDCVQELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVN
AAESKITNLIYLKHTLELVDPLKIALKNCNTPLLRAYYGSLEDKRFGIILEKIKTVINDD
AKHMKGCLNMRTQKCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLAEKYNLPLRTSFS
SARGFFIQMTVDCTALPNDQLPSEFIKISKVKNSYSFTSTDLIKMNERCQESLREIYHMT
YMIVCKLLSEIYEHIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHP
ILEKISLEKPVPNNTYITEGSNFLIITGPNMSGKSTYLKQIALSQIMAQIGSYVPAEYSS
FRIAEQIFTRISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRSTNTEEGIG
ICYAVCEYLLSLKAFTMFATHFLELCHIDVLYPNVENMHFEVQHVKNASRNKEAILYTYR
LSKGLTEEKNYGLKAAEASSLPSSIILDAREITRQIARQILDLFIYLKELHTERRRGRER
ERARASERERERSSIRWLTPQLAAMAEAALIQSQQNQRSTPEMEKQRAVYHLATRLIQTA
RNSQLNPESLRTYLLNLRKKYEEDFLTPNQVPENTEE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtattgatttaaaaagcccacagattatattatcccagtttgcagacaacaca
acatatgcaaaggtgatcactaagctcaaaattttatcacctttggaaataataatgtca
aatactgcttgtgttgtggggaattcaaccaagttgtttactctgatcacagaaaatttc
aagaacgttaattttactactgtccaaaggaaatacttcaatgaaacaaaaggattagag
tatattgaacagttttgcacagcagaattcagcactgtcctaatggaggttcagtccaaa
tattactgtcttgcagctgttgcagctttgttaaaatatgttgaatttattcaaaattca
gtttatgcacccaaatcgctgaagatttgtttccaaggtagtgaacaaacagcaatgata
gattcatcatcagcccaaaaccttgaattgctagttaataaccaagactgtaggaataat
cacactctctttggtgttctgaattatactaagactcctggagggagtagaagacttcgt
tctaatatcttagaacctctagttgatattgaaaccattaacatgagattagattgtgtt
caagagctacttcaagatgaggaactcttttttggacttcaatcagttatttcaagattt
ctcgatacagagcagcttctttctgttttagtacaaattccaaaacaagacacggttaat
gcagctgaatcaaagataacaaatttaatatacctaaaacataccttggaacttgtggat
cctctaaagattgctctgaagaactgtaacacacctttgttaagagcatattatggttcc
ttggaagataaaaggtttggaatcatacttgaaaagattaaaacagtaattaatgatgat
gcaaaacacatgaagggatgcctgaatatgaggactcagaagtgctatgcagtgaggtct
aacataaatgaatttcttgacatagctagaagaacatatacagagattgttgatgacata
gcaggaatgatatcgcagctggcagaaaaatataatcttcctttaaggacaagttttagt
tctgctcgaggatttttcatccagatgactgtagattgcacagctctacccaatgatcaa
cttccttcagaatttatcaagatttctaaagtgaaaaattcttacagctttacatcaaca
gatttaattaaaatgaatgaaagatgccaagagtctttgcgagaaatctatcacatgact
tatatgatagtatgcaaactgttgagtgagatttacgagcatattcattgcttatataaa
ctgtctgacactgtgtcaatgctggatatgctgctttcctttgcccatgcctgcactctt
tctgactatgttcgaccagagtttactgatactttagcaatcaaacagggatggcatccc
attcttgaaaaaatatctttggaaaaacctgttcctaataatacctatattacagaagga
agtaattttttgatcataactggaccaaatatgagtgggaaatctacatatttaaagcaa
attgctctttctcagattatggcccagattggatcttatgttccagcagaatattcttcc
tttagaattgctgaacaaatctttacaagaatcagtactgatgatgatattgaaacaaat
tcatcaacatttatgaaggaaatgaaagagatagcatatattttacataacgctaatgac
aaatcactcatactaattgatgaacttggcagaagtactaatacagaagaaggtattggt
atatgttatgctgtgtgtgaatatctgctgagcttaaaggcatttacaatgtttgctact
catttcctggaactatgccatatagatgtcctgtatcctaatgtagaaaacatgcatttt
gaagttcaacatgtaaagaatgcctcaagaaataaagaagcaattttgtatacctacaga
ctttctaagggtctcacggaagaaaaaaattatggcttaaaagctgcagaagcatcatca
cttccatcatcaattatcctggatgccagagaaatcacaagacaaattgcaagacaaatt
ttggatttatttatttatttgaaagagttacacacagagagaaggagaggcagagagaga
gagcgagcgagagcaagcgagcgagaaagggagaggtcttccatccgctggttaactccc
caattggctgcaatggctgaagctgcgctgatccaaagccagcaaaaccaaaggagtacc
cctgagatggaaaaacagagagctgtgtaccatctagccactaggcttatacaaactgct
agaaattctcaattgaatccagagagtttacgaacatatttacttaatctgaggaagaaa
tatgaagaagattttctcacgcctaaccaagttccagaaaatactgaagaataa
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