Oryctolagus cuniculus (rabbit): 100345617
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Entry
100345617 CDS
T03373
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100345617
03036 Chromosome and associated proteins [BR:
ocu03036
]
100345617
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100345617
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100345617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
100345617
NCBI-ProteinID:
XP_008269246
Ensembl:
ENSOCUG00000000848
UniProt:
G1SE74
LinkDB
All DBs
Position
19:complement(17047933..17099466)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLSEAKEYVIKACSRKLYNWLRVAPYRPDQHVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICSVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQTAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggctgaggaatcagaggaagaatacaatgatgacggc
gaagtggtgccccgagtcaccaagaaattcgtggaagaggaagatgatgatgaggaggaa
gaagaggagaacctagatgatcaggacgagcaaggcaacctgaaaggttttatcaatgat
gatgatgatgaagaggaaggggaggaagatgagggtagtgactccggtgattctgaagat
gacgttggacataagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgat
ttcgacctcattgaagagaatttgggtgtcaaagttaaacgaggacaaaagtaccggcgt
gtcaaaaaaatgtcagatgatgaggacgatgacgaagaggagtatggaaaggaggaacat
gaaaaagaggcgattgctgaggaaatcttccaggatggggaaggggaagaagggcaggag
gcagtggaggctcccatggctcctccagaggaggaggaagaagatgatgaggagtcagat
attgacgacttcattgtggatgatgatggtcagcctctgaagaaacctaagtggcggaaa
aagcttcctggatacacagatgcagccctgcaagaagcccaggagatcttcggcgtggac
tttgactatgacgaatttgagaaatacaatgagtatgatgaagagctggaggaagagtat
gagtatgaggatgacgaggccgagggtgaaatccgagtacgccccaagaaaaccaccaag
aagcgggtgagccgcaggagcatctttgagatgtatgaacccagtgagctggaaagcagc
cacctcacagatcaagacaatgaaatccgagccactgacctgcctgagaggtttcagctc
cgctccatcccagtcaagggggctgaagatgatgagcttgaagaagaagctgactggatc
tacaggaatgcctttgctacaccaaccatttctttacaggaaagctgtgattacctagat
cgaggacagccaaccagcagcttcagtcgaaaggggcccagcacaattcagaagatcaaa
gaagccctaggcttcatgcgaaatcagcattttgaggtgccttttatagccttctaccga
aaggagtatgtggagcctgagttgcatatcaatgacctctggagggtgtggcaatgggat
gaaaagtggacccagctgaggatccgtaaagagaacctaacacggctgtttgagaaaatg
caggcctaccagtatgagcaaatctctgcagaccccgacaaacctcttgctgatggcatc
cgagctctggacaccacagacatggaaagactcaaggatgtacagtcaatggatgaattg
aaagatgtctacaaccacttcctgctttattatggccgcgacatccccaagatgcagaat
gctgccaaggctagccgcaagaagctgaagcgtgtaagggaagagggagatgaagaaggt
gaaggtgaggaggcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtacaccatctgccagagcgctgggctagatggtttagccaaaaagtttggg
cttactcccgagcaatttggggagaacctccgggacagctaccagcgacatgagacagag
cagttccctgccgagcccctcgagctggccaaggattacgtgtgcagccagttccctact
ccagaagctgtgctggaaggggcccgctacatggtagccctacagattgcccgtgaaccc
cttgtccggcaggtcctaaggcaaaccttccaagaaagagccaagctcaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttattccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagataggcctggctgaa
gatgaagggctgctgaccatcgacatcagcatagatatgaagggagtagaaggctatggc
agtgaccagacgtattttgaagagatcaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaacagacagcgcaccatggccatcgagcgagctttacagcagttt
ctctatgtgcagatggccaaggagctcaagaacaagctgctgtctgaagccaaggaatat
gtcataaaggcctgcagccgaaagctctacaactggttgagggtggcgccctaccgaccg
gatcagcatgtagaagaagatgatgacttcatggatgagaaccaagggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccctgttttctgtgctctggtcaat
ggtgaaggagaagtgacagactttctccggctgccccatttcaccaaacggcgaactgca
tggagagaggaagagcgggaaaaaaaggctcaagacattgaaacactaaagaaatttctt
ctgaacaagaagcctcatgtggtgacagttgcaggagagaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgagctggaccagggccagcagctgtcttctatt
ggagtggagctagttgacaacgagttggcaattctttatatgaacagcaaaaaatcagag
gcagagttccgggattaccctccagtcctgcggcaggcagtctccttggcccggcgcatc
caggaccctctgattgaatttgcccaagtgtgcagcagtgatgaagacatcctctgtctc
aagtttcaccccttgcaggagcatgttgtgaaagaagagctactcaacgccttatactgt
gagttcatcaaccgagtcaatgaggtcggggttgatgtcaaccgtgccattgcccaccct
tacagccaggccttgatccagtatgtctgtggcctgggacctcgaaaagggacccacctc
ctgaagatcctgaagcagaacaacacccgactcgagagccggacccagctggtcaccatg
tgtcacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacacggct
tccctgggggacagcactgactcatacattgaagtgctcgatggttctcgtgtccacccg
gaaacctatgaatgggccaggaagatggcagtggatgccttagaatatgatgagtcagct
gaggatgccaatcctgcaggagctctcgaagaaatcttagaaaacccagagcgtctcaag
gacctggacctggatgcctttgcagaagagctggagaggcagggctatggtgacaaacac
atcacactttatgacatccgggcagagctgagctgtcggtataaggacctccggacagcc
taccgctctccgaacacagaggagatcttcaatatgttaaccaaagaaacaccggagact
ttctatattggaaagctcatcatctgcagcgtcaccggcattgcccacaggcgtccacag
ggtgagagctatgaccaggcgatccgcaacgatgagacagggctgtggcagtgccccttc
tgccaacaagacaattttcctgaactaagtgaggtctggaaccacttcgatagtggttca
tgcccgggccaggccatcggtgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaaattcctcagtgacaaagtggtcaagcggccagaggaacgagtgaaggtggga
atgaccgtgcactgccgcatcatgaagattgacattgagaagtttagtgcagacctgacc
tgccgcacctcagacctcatggaccggaacaacgagtggaaactgcccaaggacacctac
tatgactttgatgccgaggcagcagaccacaagcaggaggaggacatgaagcggaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccatctttccataatatcaatttc
aaacaagcagaaaagatgatggagaccatggaccagggtgatgtgatcatccggcccagc
agcaagggtgagaaccacttgaccgtaacgtggaaagtcagtgacggcatctaccagcac
gtggatgtgcgggaggaaggcaaggaaaatgccttcagcctgggagccacgctgtggatc
aatagcgaggaatttgaagacttggatgagattgttgcccgctatgtgcagccgatggcc
tccttcgcccgggaccttctgaaccacaagtattatcaggactgcagtggtggggaccgc
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccctat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagagtatgtaacggtgactccagagggattccggtaccgaggccagatc
ttccccactgtgaatggactcttcaggtggtttaaggatcattaccaggatcctgtacca
ggtatcactcccagcagcagcagcaggacccggacacctgcctccatcaacgctacccca
gccaacatcaacctcgcagatctgacgcgagctgtgaacgccctgccccagaacatgact
tcacagatgttcagtgccattgctgctgtgacaggccaaggacagaatcctaatgccacc
ccagcccagtgggcctccagccagtatggctatggcggcagtggagggggcagcagcgct
taccacgtattcccaacgccagctcagcaaccagtggccacaccactaatgacccccagc
tattcctacacaaccccaagccagccaatcaccaccccacagtaccaccagcttcaggcc
agcaccaccccacagactgcacaggcccagccccagccctcttccagctcccggcaaagg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcggagcag
tggctacaggagaaggaggcagaacggaggaaacagaagcagcggctgacacctcggccc
tcccccagccccatgatcgaaagcacgcccatgtccatcgctggcgacgccaccccgctc
ctggatgagatggatcggtag
DBGET
integrated database retrieval system
