Oryctolagus cuniculus (rabbit): 100345727
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Entry
100345727 CDS
T03373
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X2
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100345727
Membrane trafficking [BR:
ocu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
100345727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_HPS5
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
100345727
NCBI-ProteinID:
XP_002708149
Ensembl:
ENSOCUG00000010108
LinkDB
All DBs
Position
1:complement(62469382..62654617)
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AA seq
1422 aa
AA seq
DB search
MYFLSGWPKRLLCPLGSPAEAPFHVQSDPQRAFFAVLAPARLSIWYSRPSVLIVTYKEST
KSSTQFGSYKQTEWRPDSTMIAVSTAHGYILFFHITSARGDKYLYEPVYPKGSPQMKGTP
HFKEEQCAPALNLEMKKILDLQAPIMSLQSVSEDLLVATSDGLLHLIHWEGMTNGRKAIN
LCTVPFSVDLQSSRVGSFLGFADVYIRDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAE
QLHGVWPQDVVDGTCVAVNNKYRLMAFGCASGSVQVYTIDNTTGAMLLSHKLELTAKQYP
DIWNKTGAVKLVRWSPDNSVVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPL
KINSMSWGAEGYHLWVISGFGSQHNEIESDFRSIIKQPSILLFQFIKSVLTVNPCMSNQE
QVLLQGEDRLYLNCGEASQTQNPRSSSAHSQHKLGQDRSPFADGGLESQSLSTLLGHRHW
HVVQISSTYLESNWPIRFSAIDKLGQNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIV
TGGLAWWNDFMVLACYNMSDHQEELRVYLRTSNLDNAFAHVTKTQAETLLLSVFRDMIIV
FRADCSICLYSIERKSDGPNTTAGIQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLK
MPQQARDAESIMLNLAGQLIMMQRDRSGPQIREKDSNPNQRKLLPFCPPVVLAQSVENVW
TTCRANKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIYPLAV
LFEDALVLGAVNDTLPYDSLYTRNSAREQLEVHFPFCVVERTSQIYLHHILRQLLVRNLG
EQALLLAQSCAALPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTV
VHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATL
LFNTALEQGKWDLCRHMIRFLKAIGSGESETPPSTPTAQEPSSSGGFEFFRNRSISLSQS
AENVPPSKFSLQKTLSMPSGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLKDLGC
FAAQLGFELISWLCKERTRAARVDNFVVALKRLHKDFLWPFPIIPASSISSPFKNGKYRT
VGEQLLKSQSAEPFLNLEIDTGIPNIQRSQSWLGNIGPTHHEVDTASSQGPQMQDAFLSP
LSNKGDECSIGSATDLTESSSMVDGDWTMVDENFSTLSLTQSELEHISMELASKGPHKSQ
VQLRYLLHIFMEAGCLDWCIVIGLILRESSIINQILVITQSSEVDGEMLQNIKTGLHAVD
RWASTDCPGYKPFLNVIKPQLQKLSEITEEQAQPDAFQPVTAAKTPEQTSPRAEESRSSS
SHGSIPQGEILGTSVVSRKEEDMTRAQEEEPFQDGTYDCSVS
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctgagcggctggcccaagaggctgctttgccctctggggagcccggccgag
gcgcctttccacgttcagtccgacccgcagagggctttcttcgcggtgctggccccggcc
cgcctcagcatctggtacagccgacctagtgtgttaattgtaacctacaaggaatccaca
aaatcatctactcagtttggatcctacaagcaaactgaatggaggccagatagtaccatg
atagctgtgtcaacggcacatggctacatcttgttttttcatattacatctgcaagaggg
gacaagtacctttatgaaccagtgtatcccaaaggaagtccgcaaatgaaggggacaccc
catttcaaggaagaacagtgtgctcctgcattaaatttagaaatgaagaaaatactggat
ttgcaagcacctattatgagtttgcagtctgtatcagaagatctcctagttgctacttct
gatggacttcttcatcttattcactgggaaggaatgacaaatgggaggaaagccattaat
ctttgcacagtacccttttcagtagacctacagtcatctagagtaggttcatttctgggc
tttgcagatgtgtacatcagagacatggaatattgtgccacattggatgggtttgctgtt
gtgtttaatgacggtaaagttggatttattacaccagtatcaagtagattcactgcagag
cagcttcatggagtttggccacaagatgttgttgatggaacgtgtgtagcagtaaataac
aagtatcggttaatggcatttggttgtgcaagtggttctgtgcaggtttatacaatagat
aacaccactggagccatgcttctatctcataaattagaactaacagcaaaacagtatcct
gacatttggaataaaacaggagctgttaaattggtcagatggtctcctgacaatagtgtt
gtaatagttacctgggaatatggaggcctttctttatggagcgtgtttggagcccagctg
atttgtacacttggaggagattttgcttataggtctgatggcaccaaaaaagatcctctt
aagataaactctatgagctggggtgcagaaggttatcacctgtgggtaatcagcggattt
ggttctcaacacaatgaaattgaatctgacttcaggagtataattaagcagcccagcatt
ctgctctttcagttcatcaagagtgtactcactgtaaacccttgtatgagtaaccaagag
caagtattgcttcagggggaggatcgcttgtatttgaactgtggagaggcctcccaaacc
cagaatcccaggagttcttcagcacactcccagcacaagcttggtcaggacagaagccca
ttcgcagatggaggattagagtctcagagtttaagcactttacttggacataggcattgg
catgttgtacagatttccagcacctatctagagagcaattggccaatacggttttcagct
atcgataaacttggacagaatattgctgtcgttggcaagtttggttttgcacattactcg
ttgctcaccaaaaaatggaaactttttggaaacattactcaggaacaaaatatgattgtg
acaggtggcttagcctggtggaatgattttatggtccttgcatgttataacatgagtgac
catcaagaagagctcagagtatacttaagaacatcaaatctggacaatgcctttgctcat
gtaaccaaaacacaagcagaaacattactgctcagtgtcttccgggacatgataatagta
tttagagcagactgttcaatatgcctttatagtattgaaagaaaatcagatggtccaaat
actactgctggcattcaggttcttcaggaggtctccatgtcacgttacattcctcatcct
ttcctggtagtatctgtcactctgacatcagtgagtacagagaatggaatcaccttgaaa
atgccacagcaggctcgtgatgcagagagcattatgctaaaccttgcaggacagctcatt
atgatgcagagggacaggtcaggcccgcagatccgggagaaggacagcaacccgaaccaa
aggaaacttctgcccttctgtcctcctgttgtgctggcccagtctgttgaaaatgtctgg
actacgtgtcgagcaaataaacagaaacggcaccttctggaggccctctggctgagctgt
ggtggtgcaggcatgaaagtttggctgcctctcttccctagggatcaccgcaagccccat
tccttcttgtctcagcggatcatgctgcctttccacatcaatatttatccactggctgtt
ctgtttgaagacgcgttagtccttggtgctgtcaatgacactttgccctatgattctttg
tatacccggaacagtgcaagggaacagctggaggtgcacttccctttctgtgttgtggag
agaacctctcagatctacctccaccacattctccgtcagcttctggtcaggaaccttggg
gagcaagccttgctcttggctcagtcctgtgctgcgttaccttactttcctcatgtgcta
gagctcatgctccatgaagtgctggaagaagaagctacctcacgggaacccattcccgac
cctctgcttcccactgtggcaaaatttatcaccgagttccccctcttcctgcagacagtt
gttcattgtgccaggaagactgaatatgccctgtggaattacctttttgcagctgttgga
aaccccaaggacttatttgaggaatgtttgatggctcaggatttggacacagctgcctct
taccttattatcttacagaatatggaagtcccagcagtaagtaggcaacatgccaccctt
ctattcaacacagcactggaacaaggcaagtgggacctatgtcgacacatgattcgattt
cttaaagccattggctctggagaatctgagacacctccatccacacccacagctcaggaa
cccagctcaagtggtggatttgagttcttcaggaatcggagcatcagtttatcccagtca
gctgaaaatgttcctcctagtaaattcagcttacaaaaaacactaagtatgccatctggt
ccttctggaaaaaggtggagtaaagacagtgactgtgctgagaacatgtacattgacatg
atgctctggagacacgctcggcgcctcttagaggatgtgcgattgaaggaccttggctgt
tttgcagcccaactgggctttgaactaattagttggctgtgtaaggaacgtactcgagct
gcccgagtagacaactttgtggtagccctgaagagactccacaaagatttcctgtggcca
tttcccatcatcccagcctcttctatcagttctcctttcaaaaatgggaaataccgaaca
gtgggagagcagctgttaaagtctcagtcagctgaaccttttttaaaccttgagatagat
actggcatccctaatatccaacgaagtcaaagctggcttggcaacattggccctacccat
catgaagtagacacggcctcatcccaaggaccacaaatgcaagatgccttcctgtcacct
ttatctaataaaggtgatgaatgcagtattggttcagccacagacttgactgaaagtagc
tccatggtggatggggactggacaatggtggatgaaaatttctccacactcagtttgact
cagtctgagctagagcacatctccatggagctggcaagtaaagggcctcacaaatcccaa
gtccagcttcggtatttactacatatcttcatggaggcaggatgtctggactggtgcatt
gtcataggtctgattcttagagaatcctcaataatcaaccagattttggttattactcag
tcttcagaggtagatggagagatgttacagaacataaagacagggctacatgccgtggac
cgatgggcctctacagattgccctggatataagccatttttaaacgtcattaagccacaa
ctgcagaagctcagtgagataacagaagaacaggctcagcctgatgccttccagccagtc
acagcggctaagactcctgaacagactagcccccgggccgaggagagcaggagctcctcc
agccatggaagcatcccccagggcgagatcttggggaccagtgtggtcagccgcaaagag
gaggacatgactcgggcacaggaggaagaaccttttcaggatgggacttacgactgttct
gtgtcctaa
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