Oryctolagus cuniculus (rabbit): 100345768 Help Entry 100345768         CDS       T03373                                  Name (RefSeq) LOW QUALITY PROTEIN: roquin-1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism ocu  Oryctolagus cuniculus (rabbit) Brite KEGG Orthology (KO) [BR:ocu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ocu03000]     100345768    04121 Ubiquitin system [BR:ocu04121]     100345768 Transcription factors [BR:ocu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     100345768 Ubiquitin system [BR:ocu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     100345768 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  100345768 NCBI-ProteinID:  XP_051712902 Ensembl:  ENSOCUG00000004930 LinkDB All DBs Position 13:complement(1631924..1693379) Genome browser AA seq 1132 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPPAALLPDE AAVDLPSRKPPALPNGVGSAGSAVTQLIPRGTEPSYDSGLQPAKTDHLSSSAPGSPPDLL ESVPKSISALPVNPHPVPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA PPFEPAPYQQGMYYTAPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP VTPHPTQIRASYPREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP TLPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEV MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA PQGAPTKSINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERMPMSEVASHGKALPS ADREQLRLELQQLNHQINQQTQLRGLEAVSNRLLLQREANTLAGQPQPPPPPPKWPGMIS SEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNPSKQAENGQPEPQTKVPAEDLTL TFSDVPNGSASTQENVSLLSNKTSSLSLSEDPEGGGXSNDSQRPGVPPSSAP NT seq 3399 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagctccgcaatggacggatttcctctcctgcccaatttgcactcagacc ttcgacgagacgatccgaaagcccatcagcttgggctgtggccacactgtctgcaagatg tgcctgaataagctccatcgcaaggcttgtccatttgaccagaccactatcaatacagac attgagctcctccccgtgaactcagcattgctgcagctagtgggtgctcaggtccctgag cagcagccaattactttgtgtagtggggttgaagatacaaagcattatgaagaagccaag aaatgtgtagaagagttagcattgtacctgaaaccactcagcagtgctagaggagtgggt ttgaatagcacgactcagagtgttctgagtcgcccgatgcagaggaagcttgtgactctg gtccactgccaactagtggaagaagaaggcaggatccgtgccatgagagcagctcgatct ttaggggaacgaacagtgacagagctcattctccagcaccagaatccgcagcaactctct tctaatctttgggcagcagttagggccagaggctgccagttccttggaccagcaatgcag gaggaagctctaaaactggttctgctggccttagaagatggttctgctttgtcaagaaaa gtattggttctctttgtggtacaaaggttggaaccacggtttcctcaagcttctaaaacc agcattggacatgttgttcagctcctttatagagcctcctgcttcaaggtcacgaaacgt gatgaagattcttccttgatgcagctgaaagaagaatttagaacttatgaagctcttcgg cgagaacatgactcccaaatagtgcagattgctatggaagcaggcttacgtattgcacca gaccagtggtcctctttgctttatggagaccagtctcacaagtctcacatgcagtccatt attgataagttgcagaccccagcctcttttgcacagagtgttcaggaactaacaattgct ctgcagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctgttg gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatggg ttggttgctgtacgtacagtggtacatgggctggttgattatattcagaaccatagcaaa aaaggagcagaccaacaacagcctccacagcatagcaaatataaaacatatatgtgtcgg gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacag gaggaactggaaaaatttcggaaaatgaacaaacgcctggttccccggagaccactgagt gcctccttgggccagcttaatgaggtgggcctgcctccggcggctctccttccagatgaa gcagcagtggacctgcccagcaggaaaccccctgctctgccgaatggagttgggtcagcg gggagtgcagtgacgcagctgatccctcggggcacggagcccagctacgactccggtctg cagccggcgaagacggatcatctgagcagcagtgctccaggatcccctcctgacctgcta gaatctgtccctaagagtatttccgccttacctgtgaatccacatcctgtacctccaagg gggccagcggatctgcctcctatgcctgtcaccaaacctcttcagatggtcccacgaggt tctcagttgtatccagcacagcaggcagatgtttattaccaggaccctcgaggagctgct ccgccgtttgaaccagcaccttaccagcagggtatgtactacactgcacctccacagtgt gtgtcccgctttgtccgacctccaccgtctgctcctgaacctggtcctccgtacttggat cattatccgccctatctccaagatcgtgtagtaaactctcagtatggcacacagccgcaa cagtacccacctatgtacccacctcactatgacggccgtcgagtttaccccgctcagtct tacacaagagaagagattttccgagaaagccctatacccattgagattccacctgcagca gtaccatcctatgtaccagaatccagagaaagataccaacagatggagggttactatcca gtgactcctcatccaactcagatcagagcttcgtaccctagagaacctccttacagccgg cttcctccacctccgcagccccatcctagtctagatgagctccatcgccgccgaaaggaa ataatggcccagttagaggaaagaaaggttatatctccacctcctttcgcaccttcacca acactgcctcctacctttcatcaagaggaatttttggatgaagacttgaaggtagctggg aaatataaaggaaatgattatagccaatattctccctggtcatgtgataccatcggctcc tacattggaaccaaagatgccaaacccaaagatgttgtggcagcagggagtgtggaagtg atgaatgtggaaagtaaaggaatgagagatcaacgattagatcttcagagaagagcagcg gaaaccagtgatgacgaccttattccatttggagaccgaccaacagtatctcggtttggt gccatctctcgaacttctaaaacaatttatcaaggtgctggccccatgcaggctatggca cctcagggagctcccacaaaatccattaacatttcagattacagtccgtatggaacccac ggtggctggggaggttctccatactcacctcatcaaaacataccttctcagggacacttc agtgagagggaaagaatgcctatgtcggaagtagccagtcatggaaaagcccttccatct gcagatcgagaacagctacgactagaactgcagcaactgaatcatcagattaaccagcag acccagctgcgtggactagaggctgttagtaacaggctgctgttgcagagggaggcgaac accctggcaggccagccacagcccccaccgccacctccaaaatggcctggaatgatctca agtgagcagctgagcttggaactacaccaagtggaaagggaaatagggaagagaacccgg gaactgagtatggaaaaccagtgttccctggacatgaaaagcaaattgaacccaagtaag caagcagaaaatggacaaccagaaccacaaaccaaggttccagctgaggacctcacattg acattcagtgatgttccaaatggatcggcctcgactcaagagaacgtcagcctcctgtcc aacaagaccagctctctgagcctgtcagaggaccctgagggaggagggngcagtaatgac tcccagagacccggagttccgcccagttccgctccctga

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