Oryctolagus cuniculus (rabbit): 100345836
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Entry
100345836 CDS
T03373
Name
(RefSeq) sialoadhesin isoform X4
KO
K06548
sialoadhesin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100345836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocu04090
]
100345836
04091 Lectins [BR:
ocu04091
]
100345836
CD molecules [BR:
ocu04090
]
Proteins
100345836
Lectins [BR:
ocu04091
]
I-type lectins (Siglecs)
100345836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
C2-set_2
Izumo-Ig
C1-set
BiPBP_C
C2-set
Motif
Other DBs
NCBI-GeneID:
100345836
NCBI-ProteinID:
XP_008254475
Ensembl:
ENSOCUG00000012702
LinkDB
All DBs
Position
4:complement(18205517..18241584)
Genome browser
AA seq
1758 aa
AA seq
DB search
MSPDMALGHSGTESSRRHRELQQPELSQGGPGRPASLLDMRTSREPAMGFLLQLLLLVLL
FPPGRTSWGVSSPETVQGVKGSCLLIPCIFSFPADVQVPNGITAIWYYDYAGKRQVVTHS
ADPKQVEARFQGRAQLLGNMEHKVCNLLLRDLQPEDSGTYNFRFEISEGNRWSDVKGTSV
SVTEEPIAPTITSPAELREGMAVDFNCSTPYACVEEKVSLQWQGQDNTRSVTSNHQRLEP
TGIIHLETLHTALTWQDHGRSLRCQLSLAGHRAQAEIHLHVQYAPRGVEALLSPSGRNIL
PGDLVTLTCQVNSSYPEVSSIQWTKDGAQLEARSRVLQLPQVAWSDAGIYTCQAGNGLGS
SVSPPVSLHVFMAEVQVSPAGPIVEKQTVTLVCNTPREAPDELRYSWYKNHVLLEDAHTP
TLLLPSVTRADTGFYFCEVQNAHGRERSGPVSVVVRHPPLAPELTSFLEMQTGLVGILHC
SVVSEPLATLVLSHGGLILASTPGESDPGPRFSVSSSPNSLHLEIRDLEPADSGEYECSA
TNALGNSTSTLHFRANAARLLISPAAQVAEGQAVTLSCRSGLPSTPDTRFSWYLNGALLS
EGPSSSLLLPAVSSSDAGSYHCRAQDGHSASGPSSPTVLTVLHPPRQPTLTARLDLGAAG
AGAARRGLLSCQVDSDPPAQLRLLHKDLVVATSLQPEGGCSTCSQRVTVTKAPNLLRVEI
HNPVLEDEGVYLCEATNTLGNASASTSFNAQATVVVIRPSDTLQEGAEANLTCNVSQAAS
SSPANFSWFRNGEPWAQGPLETVTLLPVARADTALYACRILTESDTYLSAPAVLTVIYPP
DPPKLSALLDMDQGYMAVFACTVDSRPLAQLALFHGEHLLAASLGPQLPFHGRLQAKATA
NSLQLEVRDLGLGDSGSYRCEATNALGSANASLFFQVRGAWVQVSPSPELQEGQAVVLSC
QLPTGIPDGTSYRWYRDGQPLQDASSAKLHLAAVTPTQAGAYHCQAQAPGSATTSLAAPV
VLHVSYAPRQATLTALMDTGPGRMGLLVCRVDSDPPAQLRLLHGDSLVASTAQGVGELAS
SSLRLQVAVAPNMLRLEIHGAGLEDEGLYTCEATSTLGQASASANFDAEAVSVQVWPKAT
VQEGQLVNLTCFVWTSRLAQLTYTWYQDGQQRPGARSILLSNVTVTNAASYRCSVESIGR
APRLSRPVTLDVLYAPRSLHLTYLLESRGGQMALVLCTVDSRPPAQLTISRAGRLLASST
PASVPNTLRLELREPQPSDEGLYSCSAQSPLGQVNASLELRLEGVQVTLVPSASVPEGTP
VTVTCEDPTAHPPTLYVWYYNGRWLQEGPAASLTFPVAMRTHAGAYSCQVQDAQGTRSSR
PVALQVLYAPRDAVLSSFWDSRAGPMAVIQCTVDSEPPAELALSCDGKVLATSHGMTGSA
LEMGHVQVARNALRLQVQDVPAGDNSTYVCTAHNLLGSASTTGQLQATGVRVVAEPGLEM
PEGAALNLSCHLPGGPRPVGNSTFTWFWNGRPLQVEPLPTLTFSHVARAQAGLYHCRAEL
PTGTAASAPVMLHVLYPPTTPTLTVFVEPEGGLQGILDCRVDSEPPASLTLHLGSQLVAS
SQLRSPPAQGYLRILASPNALRMEVEELRPSDQGEYVCSASNALGSSSASAYFGTRALHQ
LRLFQQLLWVLGLLAGFFGLLLGLGTCYVWRSDWGGRKIKCPTALRAPPLCTNKTFSSAE
PGQELSGDGFSEGQHTAV
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccagacatggctttgggccacagtggcacggaatccagcaggcggcacagagag
ctgcagcagcccgagctgtcccaaggaggccctgggcgcccagccagcctcttggacatg
agaaccagcagagaacctgccatgggcttcctgctccagctgctcctccttgtcttgctc
ttcccgccaggccggacctcatggggcgtctccagtcccgagactgtgcagggcgtgaag
gggtcttgtctgctcatcccctgcatcttcagcttccctgcggacgtgcaggtgcccaac
ggcatcacggccatctggtactacgactatgcgggcaagcggcaggtggtgacccactcc
gcggaccccaagcaggtggaggcgcgcttccaaggccgtgcccagctgctggggaacatg
gagcacaaggtatgcaacctgctgctccgggacctgcagcccgaggactcgggcacctac
aacttccgcttcgagatcagcgagggcaaccgctggtcggatgtcaaaggcacctcggtc
tccgtgacggaggagcctattgcgcccaccatcacctcccccgcagagctgcgtgagggc
atggctgtggacttcaactgctccacgccctacgcgtgtgtggaggagaaagtcagcctg
cagtggcagggacaggacaacacccgctccgtcacttccaaccaccagcggctcgagccc
actggcatcattcacctggagaccctccacacggctctgacctggcaggaccacggccgg
agcctgcgctgccagctctcgctggccggccacagggcacaggcagagatccaccttcat
gtgcagtacgctcccaggggcgtggaggccctgctcagcccctcggggcggaacatcctt
ccaggtgatctggtcacgctcacctgccaggtgaacagcagctaccccgaggtgagctcc
attcagtggaccaaggacggggctcaactggaggccaggagtcgcgtgctgcagttgccc
caggtggcctggagcgatgccggcatctacacctgccaagcggggaatggcctgggttct
tcggtctcaccccctgtcagcctccatgtgttcatggctgaggtccaggtgagcccggca
ggccccatcgtggagaagcagacggtgacgctggtgtgcaacacacccagagaggccccc
gacgagctccgctacagctggtacaagaaccacgtgctgctggaggatgcccacactccc
acgctcctgctgccctcggtcaccagggccgacaccggcttctacttctgcgaggtgcag
aacgcccacggccgcgagcgctctggccccgtcagcgtggtggtccgccacccgcccctc
gccccagagctgacttccttcctggagatgcagacagggcttgtgggcatcctccactgc
tctgtggtcagtgagcccctggccaccctggtgctgtcgcacgggggcctcatcctggct
tccacccctggggagagcgaccctggcccccgcttcagtgtctcctcttctcccaactcc
ctgcacctggagatccgagacctggagccggccgacagtggggagtacgagtgctcggcc
accaacgccctgggaaattctacctccacgctgcacttccgtgccaatgcggcccgcctc
ctcatcagcccggcagcccaggtggccgaagggcaggcggtgactctgagctgcaggagc
ggcctgccatctacgcccgacacccgcttctcctggtacctgaatggggccctgcttagc
gaggggcccagcagcagcctcctgctccccgccgtctccagctccgacgccggctcctac
cactgccgggcccaggacggccacagcgccagcggcccctcctcgcccactgtcctcacg
gtgctccaccccccacgtcagcccacgctcactgcccgactagacctcggcgctgccgga
gccggggctgcacggcgaggcctcctgtcatgccaggtggacagcgaccccccggcccag
ctgcggctgctccacaaggaccttgtggtggccacctccctgcagccggagggtggctgc
agcacctgctcccagcgcgtaacagtcaccaaagcccccaacctgctgcgagtggagatt
cacaacccggtgctggaggatgagggcgtgtacttgtgtgaggccaccaacaccctgggc
aatgcctcggcctccacctccttcaatgcccaggccacagtcgtggtcatcagaccatcg
gacacactgcaggagggtgcagaggccaacctgacgtgcaacgtgagccaggcagcctcc
agcagccctgccaacttctcctggttccggaacggggagccatgggctcagggtccactg
gagacagtgacactgctgccggtggcccgagccgacactgccctctacgcctgccgcatc
ctcacggagtccgacacctacttgtcggctcccgcggtcctgactgtcatctatccccca
gaccctccaaagctgtcagccctcctggacatggaccagggctacatggccgtgtttgcc
tgcaccgtggacagtcgtcccctggcccagctagccctgttccatggggagcacctcctg
gctgccagcctgggaccccagcttccattccatggccgactccaggccaaggccacggcg
aactccttgcagctggaggtccgagatctgggccttggggactctggcagctaccgctgt
gaggccacaaatgctcttggatcagccaatgcctcactcttcttccaggtgcgaggagcc
tgggtccaggtgtcaccatcgcccgagctccaggagggccaggctgtggtcctgagctgc
cagttacccacggggatccctgatgggacctcgtaccgctggtatcgggatggccagccc
ctccaggacgcgagctcggccaagctccacttggcagccgtcactccaacacaagctgga
gcctaccactgccaagcccaggccccaggctcggccaccacaagcctggctgcccctgtc
gtcctccacgtgtcctatgccccgcgccaggccacgctcactgctctgatggacacaggc
cctgggcgaatgggcctccttgtgtgccgtgtggacagtgaccctccagcccagctgcgg
ctgctccatggggacagtctggtggcctctactgcccaaggcgtgggtgagcttgcgagc
agctctctccggctgcaggtggctgtggcccccaacatgctgcgcctggagatccatggg
gccgggctggaggacgagggcctctacacctgtgaggccaccagcaccctgggccaggct
tccgcctcggccaacttcgatgcagaggctgtgagcgtgcaggtgtggcccaaggccact
gtgcaggaggggcagctggtgaacctgacctgcttcgtatggacctcccgcctggcccag
ctcacctacacgtggtatcaggatgggcagcagcgcccaggtgcccgctccatcctcctg
tccaatgtcacagtcaccaacgctgcttcctaccgctgcagtgtggagtccattggcagg
gcacctcgcctctccagacctgtcaccctggatgtcctctacgccccccgcagcctgcac
ctgacctacctcctggaaagccgtggcgggcagatggccctggtactgtgtactgtggac
agccgcccacctgctcagctgaccatcagccgcgctggccgcctcctggcctcctccacc
ccagcctcagtccccaacaccctgcgcctggagctgcgggagccccagcccagtgacgag
ggtctctacagctgctcggcccagagccctctgggccaagtcaacgcatccctggagctg
cgcctagagggcgtgcaggtgaccctggtcccgtcggccagtgtgcccgaggggactcca
gtcacagtgacctgtgaggaccccaccgctcacccacccaccctctacgtctggtactac
aatggtcgttggctacaggaggggccggccgcttcactcaccttccctgtggccatgcgg
actcacgcaggagcctactcctgccaggtccaggatgcgcagggcacacgcagctcgcgg
cctgtggccctgcaagttctctatgcccctcgggacgctgtcctgtcctccttctgggac
tccagggctggtcccatggccgtgatacagtgcacagtggacagcgaaccacctgctgag
ctggccctgtcctgtgatggtaaggtgctggccaccagccatgggatgactggctcagca
ctggagatgggccatgtccaggtggcccgcaacgccctgcggctgcaggtgcaagatgta
cctgcaggtgacaacagcacctatgtctgcacggcccacaacctgctgggctcagccagc
accactggacagctgcaggccacaggtgtgcgtgtggtggctgaaccaggcctggagatg
cctgagggcgcagcactgaatctgagctgccacctccctggtggccccaggcctgtgggc
aactccaccttcacatggttctggaatggccggcccctccaggtggagcccctgcccacg
ctcaccttcagccacgtggcccgggcccaggctggcctgtaccactgccgggcagaactc
cccacggggactgcagcctctgctccagtcatgctccacgtgctctaccctcccaccacg
cccaccttgacggtcttcgtggagcccgagggtggcctccagggcatcctggactgccga
gtggacagcgagccccccgccagcctgaccctccacctcggcagccaactggtggcctcc
agccagctgcggagtccccctgcccaggggtatctccgcatcttggcctcgcccaacgcg
ctgaggatggaggtggaggagctgcggcccagcgaccagggggagtatgtatgctctgcc
tccaatgccctgggctccagctctgcctccgcctactttgggaccagagctctgcaccag
ctgcgcttgttccagcagcttctctgggtcctgggactgctggcgggcttctttggtctg
ctgttgggccttgggacctgctatgtctggagaagtgactggggaggaagaaagataaaa
tgccccactgccctcagggctcccccgttgtgtacaaacaagacgttctcatcagctgag
ccggggcaagaacttagtggagatggcttctcagaaggacaacacacagctgtttga
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