Oryctolagus cuniculus (rabbit): 100345919
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Entry
100345919 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100345919
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocu04812
]
100345919
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100345919
Membrane trafficking [BR:
ocu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100345919
Cytoskeleton proteins [BR:
ocu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100345919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
AAA_14
Mg_chelatase
AAA_16
MIT
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
DUF4368
AAA_2
MAPEG
DUF2515
Motif
Other DBs
NCBI-GeneID:
100345919
NCBI-ProteinID:
XP_051684160
Ensembl:
ENSOCUG00000010252
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MNSPGGRGKKKGSGGASSPAPPRPPPPCLAPAPPAAGPAAPPESPHKRNLYYFSYPLFVG
FALLRLVAFHLGLLFVWLCQRLSRALMAAKRSSRAAPAPASASPPEPVPGGEAERVRAFH
KQAFEYISVALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVMQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGARQGSGPAAATHKGSFKTNRTNK
PSTPTTAARKKKDLKNFRNVDXHLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRQLLLKNLLCKQGSPLSQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgagggaagaagaaaggctccggcggcgccagcagcccggcg
cctcccaggcctccgcccccctgcctggcccccgcccctcccgccgccgggccggccgct
ccgcccgagtcgccgcataagcggaacctgtactatttctcctacccgctcttcgtcggc
ttcgcgctgctgcgcttggtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcctctcccgcgccctcatggccgccaagaggagctcccgggccgcgccggcgcccgcc
tcggcctcgcccccggagccggtgccgggcggcgaggccgagcgcgtccgcgccttccac
aaacaggccttcgagtacatctccgttgccctgcgcatcgacgaggacgagaaagcaggg
cagaaggaacaagctgtagaatggtataagaaaggtattgaagaactagaaaaaggaatt
gctgtcatagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgacaaatttagtcatggccaaggaccgtttacaacttctagagaagctgcaacca
gttatgcagttttccaagtcacaaacggatgtctataatgatagtactaacctgacatgc
cgcaatggacatctccagtcagaaagtggagctgttccaaaaagaaaagatcccttaaca
cacactagtaattcactgcctcgttcaaaaacagttatgaaaactggatccacaggtctt
tcaggtcaccacagagcacctagttgcagtggtttatccatggtttctggagcgagacaa
gggtctggccctgcagctgccacccataaagggtccttcaaaacaaatagaacaaataaa
ccttctacccctacaactgctgctcgaaaaaagaaagacttgaagaatttcagaaatgta
gacnatcatctcgcaaaccttataatgaatgaaattgtggacaatggaacggctgttaaa
tttgatgatatagctggtcaagagttggcaaaacaagccttgcaggaaatcgtcattctt
ccttccttgaggcctgagttgttcacagggctcagagctcctgccagaggattgttactg
tttggtcctcctggaaatgggaagacaatgctggctaaagcggtagctgcagaatcaaat
gcaaccttctttaatataagtgctgcaagtttaacttcaaaatacgtgggagaaggagag
aaattggtgagagctctttttgctgtggctcgagaacttcaaccttccataatttttata
gatgaagttgatagccttttgtgtgaaagaagagaaggcgagcacgatgctagtagacgt
ctaaaaactgaatttctaatagaatttgatggtgtacagtctgctggagatgacagagtg
cttgtgatgggtgcaactaacaggccacaagagcttgatgaggctgttctcaggcgtttc
atcaagcgtgtatatgtgtctttaccaaatgaggagacaagacaacttttacttaaaaac
ctattatgtaagcaaggaagcccattgagccaaaaagaactagcacagctggcaagaatg
actgatggatactcaggaagtgatctgacagctttggcaaaagatgcagcactaggtcct
atccgagaactgaaaccggaacaggtaaagaacatgtctgcaagtgagatgagaaatatt
cgattatcagacttcactgaatccttgaaaaagatcaaacgcagcgtgagccctcaaact
ttagaagcatacattcgttggaacaaggactttggagacaccaccgtttaa
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