KEGG   Oryctolagus cuniculus (rabbit): 100345931
Entry
100345931         CDS       T03373                                 
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu05014  Amyotrophic lateral sclerosis
ocu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100345931
   05022 Pathways of neurodegeneration - multiple diseases
    100345931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100345931
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    100345931
SSDB
Motif
Pfam: RCC1 RCC1_2 MORN VPS9 RhoGEF PH CCDC47
Other DBs
NCBI-GeneID: 100345931
NCBI-ProteinID: XP_002712574
Ensembl: ENSOCUG00000012488
UniProt: G1T3G9
LinkDB
Position
7:31062378..31135912
AA seq 1650 aa
MDSKKGSTTEAEGSKERGLVHVWPAGSFSVTPERFPGWGGKPVLQAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEVCPSSPILENALVGQRVVTVATGSFHSGAVTEGGVVYMWGENSA
GQCAVANQRCVPEPNPVSISDSDSSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVALSESQAESQASTAISHSAETLDSQSEVFENALAERELP
VVELKEGNVQTTDGNTSCSQPCVTGTTEVSPARSTPSHPDTQAATSDHSVRGDSEDSEKP
VPSQPLVEEAIPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYST
APCETGAQAGSGSPGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLPGL
LSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPR
LQPLCVKCLDGKEVIHLEAGASHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKVS
TDNGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRQEPTEGDNLPENPSGTKTPVLLSCSKL
GYISRVTAGKDSYVALVDKNIMGYIASLHELATTERRFYSRLSDIKSQILRPLLSLENLG
AATTVQLLQEVASRFSKLCYLIGQHGASLSSFLQGLKEARNLVILKHASLFLDSYTEYCT
SITNFLVMGGFPLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLPIRRLHNY
AKVLLKLATCFEVTSPEYQKLQDSSACYESLALHLGRKRKEAEYTLGFWKTFPGKMTDSL
RKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPLSEE
AGGVNGIKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDLPPYGSGSGVQWQE
PPISRSAKYTFYKDPRLKDATYNGRWLSGKPHGRGVLKWPDGRMYSGMFRNGLEDGYGEY
RIPHKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNVRHGHGLLRSGKLTSSS
PSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDACQGNGVVVTQFGLYYEGNFHLNKM
SGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFNGEWGSGIKITGTYFKPS
LYESDKDRPPVFRKLGTLAVQADEKWKAVFDECWHQLGCESPGQGEVWKAWDNIAVALTT
SRRQHRDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPLHPLGRLV
ETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTIPLSAPLP
TERKSFCTGQSDSRSESPEPGYVVTSSGLVLPVLLPRLYPPLFMLYALDNDREEDVYWEC
VLRLNKQPDLALLGFLGVQRKFWPVTLSILGESKKVLPTTKDACFASAVECLQQISTTFT
PSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIEDL
MDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq 4953 nt   +upstreamnt  +downstreamnt
atggactcaaagaaaggaagcacaacagaagcagaaggatccaaagaaagaggcctggtc
catgtctggccagcaggatccttttcggtaacaccggagcgattcccaggctggggagga
aagccagttctgcaggcagccctgggcgtgaagcatggagttcttctgacggaagatggt
gaggtctacagctttgggacccttccctggagaagtgagccggcagaggtttgtccaagc
agccccattctggaaaatgccctggtagggcagcgtgttgtgactgtggcaacggggagt
ttccacagtggagcggtgacagaaggcggcgtagtgtacatgtggggggagaactctgcc
ggccagtgtgccgtagccaaccagcgctgtgtgccggagccgaatcccgtcagcatttct
gattctgacagcagccctttgctagctgtcaggattttgcagctggcatgtggcgaggag
cacactctggccctgtcaataagcagggagatttgggcatggggcacaggctgtcagttg
ggtctcatcaccaccaccttcccggtgacaaagccacagaaggtagaacatcttgcgggc
cgagtggtgctgcaggtggcctgcggtgccttccacagcttagcgcttgtacagtgcctg
ccttctcaggacctgaagccagtcccagaaagatgcaaccagtgcagccagctcctgatc
accatgactgacaaagaagaccacgtgattatatccgacagtcactgctgcccactaggt
gtggcgctgtccgagtcccaggcagagagccaggccagcactgccatcagccactccgca
gaaacccttgacagtcagagcgaagtattcgagaacgctcttgcggaacgtgagctgccc
gttgttgaactgaaggaggggaacgttcagaccacagacggcaacaccagctgctcccag
ccatgcgtcacgggaacaacagaagtgtctcctgccagaagcaccccgtcacaccccgac
acccaggcagctacctcggaccactcagtgagaggggactcagaggacagtgagaagcca
gtgccatctcagcctcttgtagaagaagcaattcctaatcttcacagcccaccaaccaca
agcacctcagccctaaacagcctggtggtctcttgtgcgtctgctgttggtgtgagagtg
gctgctacctatgaagctggggccttgtctcttaagaaagttatgaacttttatagcaca
gccccttgtgaaactggagctcaggcaggcagtggttccccaggcccggaaggtctgaag
gatagcagagaagagcaggtcaaacaggaatcaatgcaagggaagaaaagctcaagtctt
gtggatatcagagaagaggaatcagagggaggcagtcgaaggctctccctccctggattg
ttgtcacaagtttcccccaggcttttaagaaaggctgctcgggtgaagacgagaacagtg
gttctgacccccacgtacagcggagaagcagatgcccttctgccgtccctgaggacagag
gtgtggacctggggcaaggggaaggatggacagctgggccacggcgatgttctgcccagg
cttcagccgctgtgtgtgaagtgtctggacggtaaagaggtgatccacctggaggccggc
gcttcccattccctagcactcactgcgaaatcccaggtttactcatggggtagcaatacc
tttggtcagcttgggcattctgattttccaacaacagttcctcgtcttgcaaaggtgagc
actgacaatggagtctggagtgtagctgcaggccaggattactccctgtttttggtggat
acagaagacttccagcctgggttatgttacagtggccggcaggaacctacagaaggtgac
aaccttccagagaatcccagtggtactaagactccagtacttctctcctgtagtaagctt
ggatatataagcagagtgacagcaggaaaagatagctatgtggcgttggtggataaaaac
attatgggttatatcgccagtctccacgagttggctactacagaaagacggttctattca
agactaagtgacatcaaatctcagattctcaggcctcttctcagcttagaaaacctgggc
gcggctaccacggtgcagctgttgcaggaagtggcaagccgattcagcaagctgtgttac
ctgatcggccagcacggagcctcgctgagcagcttcctgcaggggctgaaggaagccagg
aatctggtgattctcaagcacgccagtctcttcctggatagttacacagagtattgcaca
tctattacaaatttcctggttatgggcggattcccacttcttgctaagcctgccattgat
ttcctaaataaaaaccaagaactgttacaagatttatccgaagtgaatgatgaaaacact
cagttgatggaaatactgaatactctgtttttcttgccaatcagacgacttcataattat
gccaaagttttgctaaagcttgctacttgttttgaagtgacgtctcccgaatatcagaaa
ctgcaggattccagtgcttgttacgagtctcttgctctccatctcggcaggaaaaggaag
gaagcggagtacacactgggcttctggaagacctttcccggcaaaatgacggattccttg
aggaagccagaacggcgtctgctgtgtgagagcagtaaccgagccctgtctttgcagcat
gcgggaaggttctctgtgaactggttcatcctctttaatgatgccctggtccacgcccag
ttctccacgcaccatgttttccctttggccacactgtgggtggagccgctgtctgaagaa
gctggtggtgtgaatggcataaagataaccacacctgaggagcagttcactctgatttca
tcgacaccccaggaaaagacgaagtggctgcgggccatcagccaggccgtggaccaggct
ctgagggggacatctgatctgccaccttacgggagtggcagtggcgttcagtggcaggag
ccgcccatttcacgcagtgccaagtacacgttctacaaagaccctcgcctgaaagatgcc
acctataatgggcgctggctttcagggaagcctcacggcagaggcgttctgaagtggccc
gacggaaggatgtattctggcatgttcaggaacggcttggaagatgggtatggggaatat
agaatcccacacaaggctctgaacaaagaagaccattatgtgggccactggaaagaagga
aaaatgtgtggtcaaggagtctacagttatgcctctggtgaagtgtttgaaggctgtttt
caagataacgtgcgtcatgggcacggtctccttcgaagtgggaaattgacttcctcctct
cctagtatgttcattggccagtgggtgatggataagaaagcaggatatggtgtctttgac
gatatcactaggggggaaaagtatatgggaatgtggcaagatgatgcctgtcaagggaat
ggcgtggtcgtcacccagtttggactatactatgaaggcaacttccaccttaataaaatg
tcgggaaatggggttttactttccgaagatgatactatctatgaaggagaattttcagac
gattggactcttagtggaaagggaacactgacgatgccaaatggagattacattgaaggt
tattttaatggagaatggggatctgggattaaaatcaccggaacctacttcaaacccagc
ctgtatgagagtgataaagacagacccccagttttcaggaagctgggaacactggcagtg
caggctgatgagaagtggaaagcagtgtttgatgaatgttggcaccagctgggctgtgag
agtcctggtcaaggggaagtttggaaagcgtgggacaatattgctgtggccttgaccacc
agtcggcgtcagcacagggacagcccggaaatactaagtcgttcacagactcagacacta
gagagtttggaattcattccacagcatgttggtgccttctctgtggagaaatatgacgac
atcaagaaatacttaataaaggcctgcgacactcccctgcaccccctgggcaggctcgtg
gagaccctggtggcagtgtacagaatgacctatgtgggcgtgggagccaaccgccggcta
ctacaagaggccgtgaaggagattaagtcctacctgaagcgaattttccagctggtgagg
ttcctattccctgagcttcctgaagagggcagcacaattcctctctccgctcccctgcct
accgaaaggaaatccttttgcactgggcaatcagattccagatctgagtcaccggaacca
gggtacgtggtcacgagttctgggttagtgctgcccgtgctgctgcctcggctctacccg
ccgctcttcatgctctacgctctggacaacgaccgcgaggaagacgtgtactgggagtgt
gtcctgcgactgaataagcagcccgacctggcgctgctgggcttcctcggggtgcagagg
aaattttggccagtgaccttgtcgatccttggagagagtaaaaaggttttaccaaccaca
aaagatgcttgttttgcgtcagcagtggaatgtctgcagcagatcagcacgacattcacc
ccatcagacaaactgaaggtcatacagcagaccttcgaagagatctcgcagagcgtcctg
gcctcgctccaggaggacttcctgtggtccatggacgacttgttccctgttttcctgtac
gtggtgctgcgggccaggatcaggaacctgggctctgaggtgcacctcatcgaggacctc
atggacccgtaccttcagcacggggagcagggcatcatgttcaccaccctgaaggcctgt
tactaccagatccagcgtgagaagcttaactag

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