Oryctolagus cuniculus (rabbit): 100345931
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Entry
100345931 CDS
T03373
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05014
Amyotrophic lateral sclerosis
ocu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100345931
05022 Pathways of neurodegeneration - multiple diseases
100345931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100345931
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100345931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
RhoGEF
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
100345931
NCBI-ProteinID:
XP_002712574
Ensembl:
ENSOCUG00000012488
UniProt:
G1T3G9
LinkDB
All DBs
Position
7:31062378..31135912
Genome browser
AA seq
1650 aa
AA seq
DB search
MDSKKGSTTEAEGSKERGLVHVWPAGSFSVTPERFPGWGGKPVLQAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEVCPSSPILENALVGQRVVTVATGSFHSGAVTEGGVVYMWGENSA
GQCAVANQRCVPEPNPVSISDSDSSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVALSESQAESQASTAISHSAETLDSQSEVFENALAERELP
VVELKEGNVQTTDGNTSCSQPCVTGTTEVSPARSTPSHPDTQAATSDHSVRGDSEDSEKP
VPSQPLVEEAIPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKKVMNFYST
APCETGAQAGSGSPGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSRRLSLPGL
LSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPR
LQPLCVKCLDGKEVIHLEAGASHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKVS
TDNGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRQEPTEGDNLPENPSGTKTPVLLSCSKL
GYISRVTAGKDSYVALVDKNIMGYIASLHELATTERRFYSRLSDIKSQILRPLLSLENLG
AATTVQLLQEVASRFSKLCYLIGQHGASLSSFLQGLKEARNLVILKHASLFLDSYTEYCT
SITNFLVMGGFPLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLPIRRLHNY
AKVLLKLATCFEVTSPEYQKLQDSSACYESLALHLGRKRKEAEYTLGFWKTFPGKMTDSL
RKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLWVEPLSEE
AGGVNGIKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGTSDLPPYGSGSGVQWQE
PPISRSAKYTFYKDPRLKDATYNGRWLSGKPHGRGVLKWPDGRMYSGMFRNGLEDGYGEY
RIPHKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNVRHGHGLLRSGKLTSSS
PSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDACQGNGVVVTQFGLYYEGNFHLNKM
SGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFNGEWGSGIKITGTYFKPS
LYESDKDRPPVFRKLGTLAVQADEKWKAVFDECWHQLGCESPGQGEVWKAWDNIAVALTT
SRRQHRDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPLHPLGRLV
ETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTIPLSAPLP
TERKSFCTGQSDSRSESPEPGYVVTSSGLVLPVLLPRLYPPLFMLYALDNDREEDVYWEC
VLRLNKQPDLALLGFLGVQRKFWPVTLSILGESKKVLPTTKDACFASAVECLQQISTTFT
PSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIEDL
MDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaaaggaagcacaacagaagcagaaggatccaaagaaagaggcctggtc
catgtctggccagcaggatccttttcggtaacaccggagcgattcccaggctggggagga
aagccagttctgcaggcagccctgggcgtgaagcatggagttcttctgacggaagatggt
gaggtctacagctttgggacccttccctggagaagtgagccggcagaggtttgtccaagc
agccccattctggaaaatgccctggtagggcagcgtgttgtgactgtggcaacggggagt
ttccacagtggagcggtgacagaaggcggcgtagtgtacatgtggggggagaactctgcc
ggccagtgtgccgtagccaaccagcgctgtgtgccggagccgaatcccgtcagcatttct
gattctgacagcagccctttgctagctgtcaggattttgcagctggcatgtggcgaggag
cacactctggccctgtcaataagcagggagatttgggcatggggcacaggctgtcagttg
ggtctcatcaccaccaccttcccggtgacaaagccacagaaggtagaacatcttgcgggc
cgagtggtgctgcaggtggcctgcggtgccttccacagcttagcgcttgtacagtgcctg
ccttctcaggacctgaagccagtcccagaaagatgcaaccagtgcagccagctcctgatc
accatgactgacaaagaagaccacgtgattatatccgacagtcactgctgcccactaggt
gtggcgctgtccgagtcccaggcagagagccaggccagcactgccatcagccactccgca
gaaacccttgacagtcagagcgaagtattcgagaacgctcttgcggaacgtgagctgccc
gttgttgaactgaaggaggggaacgttcagaccacagacggcaacaccagctgctcccag
ccatgcgtcacgggaacaacagaagtgtctcctgccagaagcaccccgtcacaccccgac
acccaggcagctacctcggaccactcagtgagaggggactcagaggacagtgagaagcca
gtgccatctcagcctcttgtagaagaagcaattcctaatcttcacagcccaccaaccaca
agcacctcagccctaaacagcctggtggtctcttgtgcgtctgctgttggtgtgagagtg
gctgctacctatgaagctggggccttgtctcttaagaaagttatgaacttttatagcaca
gccccttgtgaaactggagctcaggcaggcagtggttccccaggcccggaaggtctgaag
gatagcagagaagagcaggtcaaacaggaatcaatgcaagggaagaaaagctcaagtctt
gtggatatcagagaagaggaatcagagggaggcagtcgaaggctctccctccctggattg
ttgtcacaagtttcccccaggcttttaagaaaggctgctcgggtgaagacgagaacagtg
gttctgacccccacgtacagcggagaagcagatgcccttctgccgtccctgaggacagag
gtgtggacctggggcaaggggaaggatggacagctgggccacggcgatgttctgcccagg
cttcagccgctgtgtgtgaagtgtctggacggtaaagaggtgatccacctggaggccggc
gcttcccattccctagcactcactgcgaaatcccaggtttactcatggggtagcaatacc
tttggtcagcttgggcattctgattttccaacaacagttcctcgtcttgcaaaggtgagc
actgacaatggagtctggagtgtagctgcaggccaggattactccctgtttttggtggat
acagaagacttccagcctgggttatgttacagtggccggcaggaacctacagaaggtgac
aaccttccagagaatcccagtggtactaagactccagtacttctctcctgtagtaagctt
ggatatataagcagagtgacagcaggaaaagatagctatgtggcgttggtggataaaaac
attatgggttatatcgccagtctccacgagttggctactacagaaagacggttctattca
agactaagtgacatcaaatctcagattctcaggcctcttctcagcttagaaaacctgggc
gcggctaccacggtgcagctgttgcaggaagtggcaagccgattcagcaagctgtgttac
ctgatcggccagcacggagcctcgctgagcagcttcctgcaggggctgaaggaagccagg
aatctggtgattctcaagcacgccagtctcttcctggatagttacacagagtattgcaca
tctattacaaatttcctggttatgggcggattcccacttcttgctaagcctgccattgat
ttcctaaataaaaaccaagaactgttacaagatttatccgaagtgaatgatgaaaacact
cagttgatggaaatactgaatactctgtttttcttgccaatcagacgacttcataattat
gccaaagttttgctaaagcttgctacttgttttgaagtgacgtctcccgaatatcagaaa
ctgcaggattccagtgcttgttacgagtctcttgctctccatctcggcaggaaaaggaag
gaagcggagtacacactgggcttctggaagacctttcccggcaaaatgacggattccttg
aggaagccagaacggcgtctgctgtgtgagagcagtaaccgagccctgtctttgcagcat
gcgggaaggttctctgtgaactggttcatcctctttaatgatgccctggtccacgcccag
ttctccacgcaccatgttttccctttggccacactgtgggtggagccgctgtctgaagaa
gctggtggtgtgaatggcataaagataaccacacctgaggagcagttcactctgatttca
tcgacaccccaggaaaagacgaagtggctgcgggccatcagccaggccgtggaccaggct
ctgagggggacatctgatctgccaccttacgggagtggcagtggcgttcagtggcaggag
ccgcccatttcacgcagtgccaagtacacgttctacaaagaccctcgcctgaaagatgcc
acctataatgggcgctggctttcagggaagcctcacggcagaggcgttctgaagtggccc
gacggaaggatgtattctggcatgttcaggaacggcttggaagatgggtatggggaatat
agaatcccacacaaggctctgaacaaagaagaccattatgtgggccactggaaagaagga
aaaatgtgtggtcaaggagtctacagttatgcctctggtgaagtgtttgaaggctgtttt
caagataacgtgcgtcatgggcacggtctccttcgaagtgggaaattgacttcctcctct
cctagtatgttcattggccagtgggtgatggataagaaagcaggatatggtgtctttgac
gatatcactaggggggaaaagtatatgggaatgtggcaagatgatgcctgtcaagggaat
ggcgtggtcgtcacccagtttggactatactatgaaggcaacttccaccttaataaaatg
tcgggaaatggggttttactttccgaagatgatactatctatgaaggagaattttcagac
gattggactcttagtggaaagggaacactgacgatgccaaatggagattacattgaaggt
tattttaatggagaatggggatctgggattaaaatcaccggaacctacttcaaacccagc
ctgtatgagagtgataaagacagacccccagttttcaggaagctgggaacactggcagtg
caggctgatgagaagtggaaagcagtgtttgatgaatgttggcaccagctgggctgtgag
agtcctggtcaaggggaagtttggaaagcgtgggacaatattgctgtggccttgaccacc
agtcggcgtcagcacagggacagcccggaaatactaagtcgttcacagactcagacacta
gagagtttggaattcattccacagcatgttggtgccttctctgtggagaaatatgacgac
atcaagaaatacttaataaaggcctgcgacactcccctgcaccccctgggcaggctcgtg
gagaccctggtggcagtgtacagaatgacctatgtgggcgtgggagccaaccgccggcta
ctacaagaggccgtgaaggagattaagtcctacctgaagcgaattttccagctggtgagg
ttcctattccctgagcttcctgaagagggcagcacaattcctctctccgctcccctgcct
accgaaaggaaatccttttgcactgggcaatcagattccagatctgagtcaccggaacca
gggtacgtggtcacgagttctgggttagtgctgcccgtgctgctgcctcggctctacccg
ccgctcttcatgctctacgctctggacaacgaccgcgaggaagacgtgtactgggagtgt
gtcctgcgactgaataagcagcccgacctggcgctgctgggcttcctcggggtgcagagg
aaattttggccagtgaccttgtcgatccttggagagagtaaaaaggttttaccaaccaca
aaagatgcttgttttgcgtcagcagtggaatgtctgcagcagatcagcacgacattcacc
ccatcagacaaactgaaggtcatacagcagaccttcgaagagatctcgcagagcgtcctg
gcctcgctccaggaggacttcctgtggtccatggacgacttgttccctgttttcctgtac
gtggtgctgcgggccaggatcaggaacctgggctctgaggtgcacctcatcgaggacctc
atggacccgtaccttcagcacggggagcagggcatcatgttcaccaccctgaaggcctgt
tactaccagatccagcgtgagaagcttaactag
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integrated database retrieval system