Entry |
|
Name |
(RefSeq) pyrin isoform X1
|
KO |
|
Organism |
ocu Oryctolagus cuniculus (rabbit)
|
Pathway |
ocu04621 | NOD-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:ocu00001]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100345983
04623 Cytosolic DNA-sensing pathway
100345983
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
100345983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ocu04131]
100345983
Membrane trafficking [BR:ocu04131]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100345983
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
892 aa
MEHFLCLFHYFTSSLSSPTLGAAWADGLFSWRGQAPAQTLLVSAMAKTPSDHLLNTLEEL
VPYDFEKFKFKLQNTSLEKEHSRIPRGQLQMARPVRLATLLVTHYGEEHAVRLTLQVLRA
INQRLLAEELHRATEQECPAAGRAPGSPKAAEGPEGEGQRQSGDGAASSPSGQPEAGRGP
QKKPQVKRREPKCLGVDAQGRPGARRSPVLGRPPGDRPGPTSARLRRNASSAGRLQGQCG
AYPGKTEQKKLEVYLPSGKKRPKSLELISSRDREPPNPGTLLPQEEAGTRKPASAATPRG
AATHDAEAAQALEKSSRNPDHSLAPGGRTVRNTLANAAPTGGGKPTAPCGKKGTGDPETP
AAAGEAAEGAPQEAADPDLLPSAGRPQDKAACPLCHTQEGDPVGTTCRRDSCSCPVAPAH
PRASGGRLPGCPHCQVSLAWKSSRGLSPPPLPHCQRHMKQLLFCEDHGEPTCLICSLSQE
HRGHRVRPIEEVALEYRHPELCSEADFPGQSWHQLVTGAECLNKCPCQEQIQKQLEHLKQ
LRRCGEERRSQGDEKMEKFLKQTETQRQRVCCQLEQLFQFLEEQEQLFVAWLEELGQTIG
QVREKYGTRVSWNIALLDELIGELEAKQCKSEWELMQDIGVTLHSLIFRAKAVTVPEPWA
TPPEVKEKIQLLYQKSEFIEKSMESFSETLRSEMETFNVPELISAQAHAVNVTLDAETSH
PNLIFSDDLKSMRLGNKWERLPEEPERFDSCIIALGSPSFLSGRHYWEVEVGDKTAWILG
VCKASMSRKGSMILSPENGYWVVMMKQNEYRVSTFPPTRLWMRELPRRVGIFLDYKTRNI
SFYNVTARSHMYTFTSFSSSGPLQPIFSPGAHDRGKNMGPLTICPVGDQRLR |
NT seq |
2679 nt +upstreamnt +downstreamnt
atggagcacttcctgtgccttttccattatttcacaagcagcctctcctcacccaccctc
ggggctgcctgggcagatggcttattctcctggagagggcaggcgccggctcagactctg
ctggtcagcgccatggccaagacgcctagtgaccacctgctgaacaccctggaggagctg
gtgccctatgactttgagaagttcaagttcaagctgcaaaacactagcctggaaaaagag
cactcccggattccccggggccagctgcagatggccaggccggtgaggctggccaccctg
ctggtcacccactatggggaggagcatgctgtgcggctgaccctgcaggtcctgcgggcc
atcaaccagcgcctcctggcagaggagctccaccgagcgacagaacaggagtgtccggcc
gcagggagggcgcccgggagcccgaaggcggccgagggccccgaaggcgaggggcagcgg
cagagcggggacggggcggccagctcgccgtccggccagcctgaggctgggcgggggccc
cagaagaagccgcaggtcaaacggagggagccgaagtgcctcggcgtggacgcccagggc
aggccgggggccaggagaagccccgtgctgggccggccgcccggggacaggccgggcccg
acgagtgcccggctccgcaggaacgccagctcggccgggcggctccaaggccagtgcggg
gcctacccgggaaagacggagcagaagaaattggaagtgtatttaccttccggaaagaag
cgacccaaaagcctcgagctcatttcttcgagagaccgagaacccccgaatccaggaact
ctgctccctcaggaggaggccgggacccggaagccagcctcagcagccactccccgggga
gcggccactcacgatgcggaggctgcccaggccctcgagaagagctccaggaatccagac
cattccctggccccgggagggagaacagtcaggaacacacttgccaatgcagcgccgact
ggaggaggaaaacctacagcgccctgcgggaaaaagggaactggggacccagagaccccc
gcggccgcgggggaggcggcagagggtgcaccccaggaagccgcagatccagacctcctc
ccctctgcaggaaggccacaggacaaggctgcatgtcccctgtgccacacccaggaagga
gacccagttggtactacctgcaggcgtgattcctgcagctgccctgtggctcctgcgcac
cctagggcctcaggtggccgcctgcccggctgcccacactgccaggtctcgctggcatgg
aagagctcccgagggctgagccccccgcccctgccgcactgtcagcgccacatgaagcag
ctgctcttctgcgaggaccacggcgagcccacctgcctcatctgcagtctgagccaggag
caccgaggccaccgcgtgcgccccatcgaagaggtcgccctggagtaccggcaccctgag
ctctgctccgaggcagattttcctggccagagctggcaccagctggtgacgggagccgag
tgtctaaacaagtgcccttgccaggagcagattcagaagcagctggaacatctgaagcag
ctacgaagatgtggcgaggagcggaggtcccagggcgatgagaagatggagaaatttctg
aaacaaactgaaacccagaggcagagagtctgctgccagctggagcagctgttccagttt
ctggaggagcaagagcagctgtttgtggcctggctggaggagctgggccagaccatcggc
caggtcagggagaaatacggcacccgagtgtcctggaacattgcccttctcgatgagctg
attggggagctggaggccaagcagtgcaaatcagaatgggagctcatgcaggacatcgga
gtcaccttgcacagtctcatctttagggccaaggccgtgactgttcctgagccgtgggcc
actcctcccgaggtgaaagaaaagatccagctgctctaccagaaatccgagtttatagag
aagagcatggagagcttctcagaaacactgcgttcagaaatggaaacattcaacgttcca
gaactgatcagtgctcaggcacatgccgtgaatgtgaccctggacgcagaaacctcccac
cccaacctcatcttctctgatgatctgaagagcatgagactcggaaacaagtgggaacga
ctacccgaggaaccagagagattcgacagctgcattatagccctgggctctcccagcttc
ctttctggccgccattactgggaagtggaggttggagacaagacagcgtggatcctgggc
gtctgcaaggcatccatgagcaggaaggggagcatgattctgtcaccagagaatggctac
tgggttgtaatgatgaagcaaaatgagtaccgggtctccaccttccctccaacccgcctg
tggatgagggagctgcccaggcgtgtgggcatcttcctagactacaagactagaaacatt
tccttttacaacgtgacagccagatcccacatgtacacattcaccagcttctcttcttct
gggccccttcaacctatctttagccccggggcacatgatagggggaagaacatgggtcct
ctgaccatctgtccggtgggtgaccagagacttcgctga |