Oryctolagus cuniculus (rabbit): 100346030
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Entry
100346030 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-18-like
KO
K08492
syntaxin 18
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04130
SNARE interactions in vesicular transport
ocu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100346030
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100346030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocu04131
]
100346030
Membrane trafficking [BR:
ocu04131
]
SNARE
Syntaxin (Qa)
Stx-rER
100346030
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF4559
DUF6279
DUF7165
Motif
Other DBs
NCBI-GeneID:
100346030
NCBI-ProteinID:
XP_051712892
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All DBs
Position
13:16962251..16968342
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AA seq
278 aa
AA seq
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MSFIMFSKLRDFLLEHRKDYINAYSHVLSDCGRMTDTEXDQIDQDAQIFMRTCSEAIQQL
RTDAHREVHSQQVKEHSTAILDFIEDYLKRVCELDSEQRAIRVKRVVDKKRLSKLEPEPN
AKTRESIASEKASQNPSKDSEEKPASEEFPEKXLSEAQPDLSAWGDGKGEDELSPEEMQM
FEQENQRPIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQEAEVDNIHQLVVGATEN
IKEGIEDVREAIKNNAGFRVWILFFLVMCSFSLLFLDW
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttataatgttcagcaaactgagagattttctcctggagcataggaaagattat
attaatgcttacagccacgttctgtctgactgtggcaggatgacagacacagagngagac
cagatagaccaggatgcgcagatcttcatgaggacctgctcggaagcaattcagcagctc
aggacagatgcgcacagggaggtccactcccagcaggtgaaggagcacagcactgccatt
ctggatttcatcgaggattacttaaaaagagtgtgtgaacttgactcagaacagagagcc
atccgagttaaacgagtggtggataagaagagattatctaagctggaaccagaaccaaac
gcaaaaacaagagaatccatcgcttctgagaaagcgtcacagaatccttcaaaagactct
gaagagaaacctgcctctgaagagttcccagaaaagnnactgtctgaagcgcagcctgac
ttgagtgcctggggagacggcaaaggagaagacgagttatccccagaagaaatgcaaatg
tttgaacaagaaaatcagcggcccattggggagatgaacagcttgtttgatgaagtgagg
caaatcgaagggaaagtggttgaaatttccagactccaagagatattcacggaaaaggtg
ttgcaacaggaagcggaggttgacaacattcaccaattggtggttggagcgactgaaaac
atcaaggagggcatcgaagacgttagagaggccatcaagaacaacgccggcttccgcgtg
tggatcctcttcttcctcgtgatgtgctccttctccctgctcttcctcgactggtag
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