Oryctolagus cuniculus (rabbit): 100346074
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Entry
100346074 CDS
T03373
Name
(RefSeq) protein strawberry notch homolog 1 isoform X3
KO
K26273
protein strawberry notch
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100346074
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100346074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100346074
NCBI-ProteinID:
XP_008249850
Ensembl:
ENSOCUG00000002441
UniProt:
A0A5F9CYL2
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLGTPTPTPPVQQSVPLNALELGLETEAA
VPVKQEPEAVPPSALLNMRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSVSAPAVRNAVTSAPSKDQVQLKDLLKNNSLNELMKLKPPPNIAQPVA
TAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEDDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAVTY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTG
VTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKVKKRKGDEITREAKKAR
KVGGLAGSGSDDSGSESDASENEESDYESSRNMSSGDDDDFNPFRDESSEDDEDDPWLIR
KEHKKNKEKKKKKSIDPDSIQSALLASGLGSKRPSFSSTPVIAPAPNSAPASSNTNSSSS
LVTSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSN
DDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRR
VHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALT
HGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLI
GVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNG
RYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTG
PDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSD
DALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEG
VLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQ
QHHPQSIASLSSA
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagggcaagatttactgcttgctgctttgagtgagagtggaattagccca
aatgacctctttgatattgatggtggagatgcgggacttggaactccaacacccactcca
ccagttcagcagtctgtgcccctgaatgcgttagaactgggtttggagactgaagcagca
gttcctgttaaacaagaaccagaggctgtccctccttcagcactgttaaatatgaggcag
cagcctccatctactacgacttttgtgctcaatcaaataaatcagcttccgaccttggga
tctacaattgtgatgactaaaacaccacctgtgacaaccaataggcaaaccatcacttta
acaaaatttatccagactactgcaaacacacgcccgtcagtctcagcaccagcagtccga
aatgcagtgacctctgctccttcaaaagaccaggttcagctgaaggatctgctcaaaaat
aacagtctgaatgaactcatgaagctgaagccacctcctaatattgcgcagccagttgcc
acggcagctactgatgtaagcaatggtacagtaaagaaagagtcttctaacaaagaagta
gcaagaatctggataaatgacatgaaaatgaggagtttttccccaactatgaaggtccct
gttgtaaaggaggatgatgagcccgaggaagaggatgaagaagaaatgggtcatgccgag
acctatgcagaatatatgcctataaaattgaaaattggcctacgtcacccagatgctgta
gtggaaactagctctttatccagtgttactcctcctgatgtttggtacaaaacatctatt
tctgaagaaactatcgacaatggctggttgtcagcattacagcttgaggcggtcacatat
gctgctcagcaacatgaaacgttcctgcccaatggagaccgtgccggcttcttgataggt
gatggtgccggggtaggcaaaggacggacgatagcaggcatcatctatgagaactacctg
ctgagcaggaagagggccctctggtttagtgtttcaaatgatttaaagtatgatgctgaa
agagatttgagggatattggagcaaaaaacattttggtccattcattgaataagtttaaa
tatgggaaaatttcttccaagcataatgggagtgtgaaaaagggtgttatttttgccaca
tattcttctcttattggtgaaagccaatctggtggtaaatataaaacaaggttaaaacaa
cttctacattggtgtggcgatgacttcgatggagttatagtctttgatgagtgtcataaa
gcaaaaaacttatgtcccgttggttcttcgaaaccaaccaagacaggcttagcagtttta
gagctgcagaacaaattgccaaaagccagagttgtttatgctagtgccactggtgcttct
gaaccacgtaacatggcctatatgaaccgtcttggaatctggggtgaggggacaccattt
agagaattcagtgattttattcaagcagtggaaagaagaggcgtgggtgccatggaaata
gttgctatggatatgaagcttcgaggcatgtacattgctcgacagctgagctttactgga
gtgaccttcaaaattgaggaagttcttctttctcagagctatgttaaaatgtataacaaa
gcagtcaagctgtgggtcattgccagggaacgatttcagcaggctgcagatcttattgat
gctgagcagcggatgaagaagtccatgtggggtcagttctggtctgctcaccagaggttc
ttcaaatacttgtgcatagcgtccaaagttaagagggttgtgcagctagctcgggaagaa
atcaagaatggaaagtgtgtggtcattggcctgcagtccacaggagaagctagaacctta
gaagccttggaagagggcgggggagaattgaatgattttgtttcaactgccaaaggagtg
ttgcaatctctcattgaaaagcactttcctgctccagacagaaaaaaactgtatagttta
ctaggaattgatttgacagctccaagtaataacagttcaccgagagacagtccttgtaaa
gaaaataaagtaaagaagcggaaaggtgatgaaataacacgagaagccaaaaaagcacga
aaagtgggtggccttgctggtagcggttctgatgacagtggaagtgaatccgatgcctct
gagaatgaagagagtgactatgagagctccagaaacatgagttctggagatgatgacgat
ttcaatccatttcgagacgagtccagtgaggacgacgaagatgatccttggctaatcaga
aaagagcacaagaaaaacaaagagaaaaaaaagaagaaaagtatagatccagattctatt
caaagtgccttattagcttcaggtcttggctccaaacgacctagcttttcatctacacct
gttattgcacctgctcccaacagtgccccagctagtagtaataccaacagtagcagcagc
cttgtaacaagtcaggacgctgtggaaagggcccagcagatgaagaaagacctccttgac
aagctagaaaaattagctgaagacctccctcccaacaccctggatgagctgattgatgaa
cttggtggccctgagaacgtagctgagatgaccggccgcaaggggcgggttgtaagcaat
gacgatgggagcatatcctacgagtcacgatcggagctggacgtacccgtggagatcctg
aatatcacagaaaagcagaggttcatggacggagataagaatattgctattatctcagaa
gctgccagctcaggcatttcattgcaagcagatcggagagctaaaaatcaaaggcgaaga
gttcacatgactttggaattaccttggagtgctgatagagcaattcagcagtttggaaga
actcatagatcaaaccaagttactgctcccgaatatgtctttctgatttctgagttggca
ggggaacaaagatttgcatctattgttgccaaaagacttgagagtttgggggcgcttaca
catggggacagaagagcaacagaatctagagatttgagcaggttcaactttgacaataag
tatggaagaaatgctttagaaattgtcatgaaatccattgtaaacttggattctcctatg
gtatccccacctccggactatcctggagaattctttaaagatgttcgtcaaggattgata
ggagtcggcctgataaatgtagaagatcgctcaggaattcttactcttgataaagattat
aacaacataggaaaattcttaaatagaattttgggtatggaggtgcatcagcagaatgca
ttatttcagtattttgcggacacacttactgcagttgttcaaaatgccaaaaaaaatgga
agatatgatatgggaatcttagatcttggttctggggatgaaaaggtgaggaagagtgat
gttaagaagtttctgactccaggatactcaacctctggtcatgtggagctgtacacaatc
agcgtagagaggggaatgtcctgggaggaagccaccaagatttgggcagaactaacagga
ccagatgatggcttttacttgtcattgcaaataaggaacaacaagaaaactgccatctta
gttaaagaagtaaaccctaaaaagaagctcttcttggtttatcgaccaaataccgggaaa
caactcaaattagaaatttatgctgatctaaaaaagaagtataagaaggtagtctcagat
gacgccttggttcactggttggatcagtataattcgtctgcagacacttgcactcacgct
tactggcgtggcaattgcaaaaaagcaagcttgggattagtttgtgaaataggcctccgt
tgtcgcacatattatgttttatgtggttcagtgctgagtgtctggacaaaagttgagggt
gttctagcatctgtcagtggtacaaatgtgaaaatgcagatagttcggctaagaacagaa
gatggacaacgaattgtaggcttgatcattccggcaaattgtgtgtctcctcttgtaaac
ctcctgtcgacgtcagaccagtcccagcagcttgcggtccagcagaagcagctgtggcag
cagcatcacccgcagagcatcgccagcctgagcagcgcgtga
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