Oryctolagus cuniculus (rabbit): 100346186
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Entry
100346186 CDS
T03373
Name
(RefSeq) fractalkine
KO
K05508
C-X3-C motif chemokine 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04060
Cytokine-cytokine receptor interaction
ocu04061
Viral protein interaction with cytokine and cytokine receptor
ocu04062
Chemokine signaling pathway
ocu04148
Efferocytosis
ocu04668
TNF signaling pathway
ocu05163
Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100346186
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100346186
04061 Viral protein interaction with cytokine and cytokine receptor
100346186
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100346186
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
100346186
09160 Human Diseases
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
100346186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and growth factors [BR:
ocu04052
]
100346186
Cytokines and growth factors [BR:
ocu04052
]
Cytokines
Chemokines
100346186
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
CXCL16
Motif
Other DBs
NCBI-GeneID:
100346186
NCBI-ProteinID:
XP_002711587
Ensembl:
ENSOCUG00000007482
UniProt:
G1ST53
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Position
5:13551207..13564074
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AA seq
404 aa
AA seq
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MAPIAPQWLLRLAAFCPLMVPLAGQHLGVAKCSIICNNMTPKIPVALLISYQWNQESCGK
PAIVLETKRHKRFCADPQAPWVQEAMKHLDRQAVARTPNSGTFEKQIGAVKPGASTVKPG
TTAAPGGMPEPAVSEPRPTGDSRSPEPTPAPQEAQTTLGTSPALPAGVPSSSGSGSLVTQ
KPQDGRPPVGPTGPEFVNTAPVSTAGSWQTSAHQHGATESPSAETPSTEHPSTQALTTSY
PASEENLGSESQSPGAPALSPRPGDPQSTWETVPVVAHTGAFQDGGAGSTAYASVVPGSS
EGTPSREPAASGSWTPKAEEPVHATVDPQRLGVLITPVPDSQAATRRQAVGLLAFLGLLF
CLGVAMFAYQSLQGCPRKMAGEMVEGLRYVPRSCGANSYVLVPV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctcccatcgctccccagtggctgctgcgtttggctgctttctgcccactgatggtc
ccgctggctggacagcaccttggggtggcgaaatgcagcatcatatgcaacaacatgacc
ccgaagatccccgtggctttactcatcagctatcagtggaaccaggaatcttgtggcaaa
cccgccattgtcttggagacgaagaggcacaagcgcttctgtgctgacccccaggcgcca
tgggtccaagaagctatgaaacaccttgaccgccaggctgttgctcggaccccaaacagc
ggcacattcgagaagcagattggcgcagtgaagcccggtgccagcacggtgaagccaggg
accacggcagctcccggcgggatgcccgaacctgcggtctcagagcccagacccacgggg
gacagcaggagccccgagccgactcccgctccccaggaggcacagacgaccctggggacc
tccccagcactgcctgctggggtgccgagctcctcagggagtggctcccttgtcactcag
aagcctcaggacggaaggcccccagtggggcccacgggtcctgagtttgtcaacacggcc
cctgtctccaccgccggctcttggcagacttctgcacaccagcacggggccaccgagtcc
ccctctgctgagacgccctccacagagcacccctccactcaggccctcaccacctcatac
ccagcctcagaggagaaccttgggtctgaaagccaatctccaggggcccctgcactgagc
cccaggccaggggaccctcaaagtacctgggagacagtgcccgtggttgctcacacgggt
gccttccaggatgggggtgctggcagcacggcctacgcttctgtggtccctggctcctct
gaagggacccccagcagggagcctgcggcctcaggcagctggacccccaaggccgaggag
cccgtccatgccactgtggacccccagaggctgggcgttctcatcactcctgtccctgac
tcccaggcggccacccggaggcaggcggtggggctgctagccttcctcggcctcctcttc
tgcctgggggtggccatgttcgcctaccagagcctgcagggctgcccccgcaagatggcg
ggggagatggtggaaggcctgcgctatgtgccccggagctgtggcgccaactcctatgtc
ctggtgccggtttga
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integrated database retrieval system