Oryctolagus cuniculus (rabbit): 100346256 Help Entry 100346256         CDS       T03373                                  Name (RefSeq) afadin isoform X1   KO K05702   afadin Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04014   Ras signaling pathway ocu04015   Rap1 signaling pathway ocu04024   cAMP signaling pathway ocu04520   Adherens junction ocu04530   Tight junction ocu04670   Leukocyte transendothelial migration Brite KEGG Orthology (KO) [BR:ocu00001]  09130 Environmental Information Processing   09132 Signal transduction    04014 Ras signaling pathway     100346256    04015 Rap1 signaling pathway     100346256    04024 cAMP signaling pathway     100346256  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     100346256    04530 Tight junction     100346256  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     100346256 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RA DIL PDZ FHA PDZ_6 RA_2 PDZ_2 RA_3 RASSF8-10_RA Yop-YscD_cpl DUF7283 Motif Other DBs NCBI-GeneID:  100346256 NCBI-ProteinID:  XP_051697853 Ensembl:  ENSOCUG00000007297 LinkDB All DBs Position Unknown AA seq 1909 aa AA seqDB search MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLHVDEKPLVVQLNWSK DDREGRFVLKNENAAAAAPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALR QASDREDRPLPGDDVENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFR SSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCLA RVMLPPGAQHSDDRGAQEMVLDDDECPLQIFREWPSDKGILVFQLKRRPPDPVPSAVKKQ GDARPLRGKERADGAGYGSALPPEKLPYLVELSPGRRSHFACYSHHTGEDGSDSRDKPKL YRLQLSVTEVGTDKFEDNSIQLLGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQRIS ETTMLQSGMKLQFGASHVFKFVDPSQDHVLAKRPAEGGLMKGARHKPGMVQETTFDLGGD VHSGAALPTSKSTGRLDGDRAPSASGTVERGLVRPMMRPEQQDQRRHEGRPQEAPGLDLL LPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDASPAERT HKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFVKQDRDLSRITL DAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEESSLQRPSIDDVLHTLTGAMSLL RRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEKQ GLELAADCHLSRIVQATTLLTMDKYAPEDVPSVNSTCFKLNSLQLHALLQNYHCAPDEPF IPADLIENVVAVAENTADELARSDGRDVRLEEDPDLQLPFLLPEDGYSCDVVRNIPSGLQ EFLDPLCQRGFCRLIPHTRSPGTWTIYFEGVDYGSYLVRENTELAQPLRKEPEIITVTLK KQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQER AAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYN NSAQNGSPESPPMPWAEYSEPKKLPGDDRLVKNRADHRSSPNVATDQPPSPGGKGTHPSG AAAKITSVSTGNLCAEEPLPAPRPEAYPIPTQTCTREYFTFPASKSQDRAAPPHSQWPSY EDKPLVHTDSNHCSVAAQRVARSQEELREDKAYQLERQRVESAMDQKADSDMWLNQSSSV ESSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAVPAAPVAVSQPIRADLPPPPPPPP AHYASDFEGVAMDLPLPPPPSAGQVGPQAAQVAAAERKKREEHQRWYEKEKARLEEERER KRREQERKLGQMRAQPLPPAPFAPLPAPQAKPEKPSSLPRPQETVIRELQPQQQPRTIER RDLQYVTVSKEELGSGDSLSPDPWKRDAREKLEKQQQLHIVDMLSREIQELQARPDRSAE ESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEEEDVDTLLIMQRLEAERRARQTAVPAIS VLDLLQDEERRRQQQLEEMRKREAEDRARLEEERMKRDAEEKRRQEEGYYSRLEAERRRQ HEEAARRLLEPEEPGLSRPPLPRDYEPPCPSPALGAPPPPPQRNTSYLKTQALSPDSLFT ARLVAYEEEEEEAESDPSPAGQDKYSSTRKSHGHLPAAAREPQPRPASDGISLSSSFRPP SAKANSTAHRAGQPPPPPKKPSFCRPRHPPGPNSYTGSTGTAAGAQDASRDPREKRSKSH DADSPGSAGAPENLTFRERQRLFSQGQDVSDKVKASRKLTELENELNTK NT seq 5730 nt NT seq  +upstreamnt  +downstreamnt atgtcggccggcggccgcgacgaggagcggcggaagctggccgacatcatccaccactgg aacgccaaccggctggacctgttcgagatcagccagccgaccgaggatttggagttccat ggagtgatgagattttattttcaagacaaagctgctggaaacttcgcgacgaaatgcatt cgggtctccagtacggctaccactcaagatgtgatcgagacgctggcggagaagttccgg cctgacatgcggatgctgtcctctcccaagtactccctgtacgaggtgcacgtcagcgga gaagaaagaaggctgcatgtggacgagaagccgctggtcgtgcagctgaactggagcaag gacgaccgcgagggcaggttcgtgctgaagaacgagaacgccgccgccgccgctccgaag aaggctcaaagtaatggacctgagaagcaagagaaagaaggcgtcatccagaatttcaag agaactctctcgaagaaagagaagaaggaaaagaagaagagagaaaaagaggccctgaga caggcgtccgaccgggaggaccggcctctccccggggatgacgttgagaattcgcgcctg gcagccgaggtgtacaaggacatgcccgagaccagcttcacgcgaaccatttccaacccg gaggtggtcatgaagcgacggaggcagcagaagttggagaagagaatgcaggaattccga agctccgacgggcggcctgattcaggtgggacgttgaggatctacgcagacagcttaaag ccaaatattccctacaagacgatcctgctgtccactacggatcctgcagacttcgctgtg gctgaggcgctggagaagtatggcctggagaaagagaaccccaaggattactgcctggct agggtcatgcttcctccgggagcccagcattcggatgacagaggcgctcaggaaatggtt ctcgatgatgacgagtgtcccttgcagatcttcagggagtggccgagtgacaaggggata ctcgtgttccagctgaagaggaggccgccagaccccgtcccgtcggcagtgaagaagcag ggggacgcgaggccgctgagggggaaggagcgggccgacggggccggctacggctcggcc ctgccgcccgagaagctgccctacctggtggagttaagcccagggaggaggagtcacttt gcctgctacagccatcacactggcgaagacggctccgactccagagacaagccgaagctc tatcgcctgcagctgagcgtgaccgaggtcgggacggacaagttcgaggacaactccatc cagttgcttggcccaggcattcagccgcatcactgtgacctcaccaacatggacggcgtg gtcaccgtgacgccgcggagcatggacgcggagacgtacgtggacggccagcgcatttcc gagaccaccatgctgcagagtggcatgaaactgcagttcggggcgtcgcatgtgttcaag tttgtggaccccagccaggaccacgtgctggccaagaggcccgcggagggaggcctgatg aagggcgcgaggcacaagccaggcatggttcaggagacaacttttgatttagggggcgac gtgcacagtggagcggcgttaccaacaagcaagagcacgggcagactggacggcgacaga gccccctctgcttccggcacggtggagcgaggcctggtgagacccatgatgcggccggag cagcaggatcagcgcaggcacgaaggcagacctcaggaggctccggggctggacctgctg ctgcctgcgagcattgagttcagggagagctctgaagattcattcttgtctgccattata aattataccaatagttctacagtccacttcaagctgtcgcctacgtacgtgctgtacatg gcctgccggtacgtactgtccagccagtacagacctgacgccagccccgccgagcgcacc cacaaagtcattgccatcgtcaacaagatggtgagcatgatggaaggagtcatccaggaa gtagaccaggttgatcagaagcagaagaacatcgcgggggcgctggccttctggatggca aacgcctctgagctcctcaacttcgtgaagcaggaccgggacctcagccgcatcacgctg gacgcccaggacgtcctggcgcacttggtgcagatggccttcaagtacctggtccactgt ctgcagtcagagctcaacaactacatgccggccttcctggacgaccccgaggagagcagc ctgcagaggcccagcatagacgacgtgctgcacacgctcacgggcgccatgtccttgctg cggcgctgcagggtcaacgctgcgctcaccatccagctcttctcgcagctcttccacttc atcaacatgtggctgttcaacagactggtcactgaccccgactccgggctgtgctcccac tactggggcgccatcatccgccagcagctggggcacatcgaggcctgggccgagaagcag gggctggagctggcggccgactgccacctgagcaggattgtgcaggccaccactttgctc accatggataagtatgcgcccgaggacgtgcccagtgtgaacagcacctgctttaagttg aactccctgcagctgcacgccttgctgcagaactaccactgtgcgcccgacgagcctttt atcccagcggatctcatagagaacgtggtggccgtggctgagaacacggccgacgagctg gcccgcagcgacgggcgggacgtgcggctggaggaggaccccgacctgcagctgccgttc ctgctgccggaagacggctactcgtgcgacgtggtcagaaacatccccagcgggctgcag gagttcctggaccccctgtgccagagagggttctgcaggctgattcctcacacgcgctcg ccgggcacttggacgatctacttcgaaggtgtggactacggaagttaccttgtgcgtgag aacacggagctggctcagcctctgaggaaagaaccggaaatcatcactgtgaccttgaaa aagcagaacggaatgggcctgagcattgtggcggcaaagggcgcgggccaggacaaactg ggaatctacgtgaagtctgtcgtgaaaggaggcgcggcggacgtggatggacggttggct gcaggggaccagctcctcagtgtggatggacgaagcctcgtcggactctctcaggaaagg gctgcggagctcatgacaaggacgagttctgtggtgacacttgaagtggcgaagcaaggt gccatctaccacggcctggcgaccctcctcaaccagccgtcccccatgatgcagagaatt tcagatcgccgtggctcggggaaacctcgacccaagagtgaaggttttgagctctataac aactcagcccagaacgggtctcctgaaagtcctccgatgccctgggcggagtacagtgag ccaaagaagctgcctggtgacgacagactggtgaagaacagagccgatcaccgctccagc cccaacgtcgcaacagatcagccccccagccctggaggaaagggcacgcacccctctgga gcagcagccaagataacgtcggtctccacggggaacctgtgtgctgaggagccgctgcct gcacccaggcccgaggcctaccccatccccacacagacctgcacccgcgagtacttcacc ttccccgcctccaagtctcaggaccgggcggcccctccgcacagccagtggccgagctac gaggacaagcctctcgtgcacacggacagtaaccactgcagcgttgcagctcagcgtgtc gctcgctcccaggaggagcttagggaagataaagcttaccagctggagcggcagcgggtg gagtccgctatggaccagaaggccgacagcgacatgtggctcaatcagagctcctctgtg gagtccagcacctccagccaggagcacctgaaccattcctccaagtccgtcaccccggcc tccactctgaccaaaagcggccctggccggtggaagacgccggcagccgtccctgccgcc ccggtggccgtctcccagcccattcgggcagacctgcctccaccgcccccgccgcctcct gcccactatgccagtgatttcgagggggtggccatggacctgcctctcccaccccctccc tctgccggccaggtgggaccccaggcggcccaggtggccgcagcggagcggaagaagcgg gaggagcaccagcggtggtacgagaaggagaaggcgcgcctggaggaggagcgggagcgg aagcgcagggagcaggagcggaagctgggccagatgcgcgcgcagcccctcccgccggcg ccgttcgcccctctgcccgccccgcaggcgaagccggagaagccgagctccctgccgcgg ccccaggagacggtcattcgggagctgcagccgcagcagcagccccgcacgatcgagcgc cgggacttgcagtacgtcacggtcagcaaggaggagctgggctccggggacagcctgtcc cccgacccctggaagcgggacgccagggagaagctggagaagcagcagcagctgcacatc gtggacatgctgagcagggagatccaggagctgcaggcccggccggaccgcagcgccgag gagagcgaccggctgcgcaagctcatgctggagtggcagttccagaagcggctgcaggag tccaagcagaaggacgaggacgacgaggaggaggaggaggaggacgtggacaccctgctg atcatgcagcgcctggaggccgagcgaagagcccggcagactgctgtgcctgcaatctct gttctagatttgttgcaggacgaggagcgccggcggcagcagcagctggaggagatgcgg aagcgggaggcggaagaccgcgcgcggctggaggaggagcgcatgaaacgggacgctgag gaaaagaggcgacaggaggaggggtattacagccgcctggaagccgagagacgcagacag cacgaggaggctgcgcgcaggctgctggagcccgaggagcccgggctgagccgaccgccg ctgccacgggactacgagccgccgtgcccgtccccggccctcggcgcccccccgcctcca ccccagcggaacacctcctacctcaaaacgcaggccctctccccagactcgctgttcacg gccaggcttgtcgcgtacgaggaggaggaggaagaggcggagtcggaccccagcccggca ggtcaggataagtactccagcaccaggaagtctcatgggcaccttcctgctgccgcccgg gagccgcagccacgcccggcctccgacggcatctccctctccagctcattccggccaccc tccgccaaagccaacagtactgcccacagggcggggcagcccccgccccctccaaaaaag ccgagcttctgccgcccccgccaccctccaggaccaaactcttacacgggatctactggg acggccgccggagcccaggacgcctcccgggatcccagggagaagcgcagtaagagccac gacgcggactcgcctgggagtgccggggcccctgagaacctgacgttcagagagcgccag cgtctcttctcgcaaggccaggacgtgtccgacaaagtcaaagcctcccggaaactgaca gaactggaaaacgaactgaacaccaagtga

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