Oryctolagus cuniculus (rabbit): 100346264 Help Entry 100346264         CDS       T03373                                  Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04142   Lysosome Brite KEGG Orthology (KO) [BR:ocu00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     100346264  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ocu04131]     100346264 Membrane trafficking [BR:ocu04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     100346264  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     100346264    RAVE complex     100346264 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_DCAF4 Beta-prop_WDR19_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 MIOS_WD40 Beta-prop_RIG_2nd Beta-prop_Vps41 Motif Other DBs NCBI-GeneID:  100346264 NCBI-ProteinID:  XP_051700068 Ensembl:  ENSOCUG00000000051 LinkDB All DBs Position 3:3575052..3754306 Genome browser AA seq 3099 aa AA seqDB search MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV GCVDCSMQQGKIAASYGNIISIFEPVNIPKQKKNLELYSQWQKSGQFFLESIAHNITWDP TGNRLLTGSSCLQLWSNINLEKPTEEENPDKTDLDFGDWRCIWHCKTASQVHLMKFSPDG EFFATAGKDDCLLKVWYNVETWRTSVTSPDTSSEKQSQGEIDFSFVYLAHPRAVNGFSWR KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCSHWTEPVNLTNNFKRNA SNKERVQNAIEVNLRHFRRGHRKSLALVANTGYLPHQQDPHLVHRNTPLHANALCHFHIA ASINPATDIPLLPSITSLSLSENEEKRGPFVVHWLNNKELHFTLSMEVFLQQLRKSCEQP SSEASGEDCNQTDVKSDEEMDDDVDDVKINHEKKESGSDKMVPNLSFAPLPSAAIDHQIE ILLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN SLCKSIVMYACTKNVDLAIQQGKQKPSGLTRSTSMLISSGHNKSSNSLKLSIFTPNVMMI SKHDDGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA LRTPDVDNPKQPYAVNIEECSLTQQNKSTVDMAFQDPNAVYSELILWRVDPVGPLSFSGG VSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAKK LLCELSNPEISRFVGEVFNIVSQQSTARPGCIIALDPITKLHGRKTQLLHVFQEDFILNN LEKKSLGKDSILSDAGSSPKGFSEKFYLVVIECTQENRSLLHMWNLHLKSVPVSLDEKVD KKKSEAVWQPEDHYSPSPEKIPSPFSQKYQACRANLQSTSKLTLFSEMVYSQELDLPEGV EIISVKPSAGHLSSSSIYPACSAPYLLATSCSDEKVRFWRCRVTKGESATSKNENLDLVY VWEEWPLLIEDGLQTNSSLTVPGRPVEVSCAHTNRLAVAYKQPTSSSRSSQDFVMHVSIF ECESTGGSCWVLEQTIHLDELSTVLDSGISIDSNLVAYNKQEAYLFSKESIALNTKHLVH LDWMSREDGSHILTVGIGSKLFMYGPLAGKVQEQSGKESLAFPLWESTRVVPLSKFVLLR SVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVVTDSFSGSTPS IISLIKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKKTAFDPSVDMEDSGLFEAAHVLSP TLPQYHPLQLLELMDLGRVRRAKAILSHLVKCIAGEVVALNEAESNHERRLRSLTISASG STSRDPQAFNKAENTDYTEIDSVPPLPLYALLAADDDSCHSSLDKSSNENTLNKSNQLSK ESYDELFQTPALMTDTDVLETDEENMKPKVIDLSQYSPNYFGPEHARVLSGHLLHSSLPG LTRMEQMSLMAVADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPAY RAQLVHQGLSTCHFAWAFHSVAEEELLNMLPAMQRDDPTWSELRAMGVGWWVRNTRILRR CIEKVAKAAFYRKNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGHNFEDERWRKA ALKNAFSLLGKQRFEHSAAFFLLAGCLRDAVEVCLEKLNDIQLALVIARLYESEFDTSST YKSILCKKVLGIDSSVTEFSSVNMNMHCDPFLRSMACWILEDYSGALETLIRQPVREDDD QVMTSACNPAVFNFYNYLRTHPLLLRRHFGSSDTFPTHMSLTGKSGLAGTISLSERRLFF TTASAHLKAGCPMLALEVLSKMPKVITKTKAFYKASSFLDTGRGSSPLKLDAEEDKSSAV DWSESLINGFGSSSEGSSEKQSNSALSFDWSQPSVIFQDDSLELKWDSDNDEENEDLPLS MKELKPLQRKIDKKLEEVSSSYTESFSTINENDILDPSEDIIAVQLKFRACLKILTVELR TLSTGYEIDGGKLRYQLYHWLEKEVIALQRTCDFCSDVEEPPSALGKSGGEFGLNEDTED LLHQAKGKQLRENFQEKRQWLLKYQSLLRMFLSYCVLHGSHGGGLASVRMELILLLQESQ QETSEPLFTSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIISFESPPHPD LQSNKVYVMHTLAASLSACIYQCLCGSHNYSSLQTNQFTGMVYQTVLLPHRHSLKTGSLD EAITPNTSPAQWPGITCLIRLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLATHSSNE LFRIVAHPLNEKMWSAIFGGGAHVPSKEQTDSKTLPGRHFAMPSPHQVVVFSMECVGFSK ALSAISSHSPTSPAVSSLVEEGEKQNKRFRPSNMSCRASAPLNPSSPPGSRESLTVREKF IPPELSIWDYFIAKPFLPPSQSRAEYDSEESMESGDDDDDDDISASDFHLQEHSNSNSYS WSLMRLAMVQLVLNNLKTFYPFAGHDLAELPVSSPLCHAVLKTLQCWEQVLFRRLEIYGG PPQNYIASHTSEEGLSAGPAILRHKALLEPTNTPFKSRHHLALSVKRLWQYLVKQEGIQE TFIRNIFTKKRCLNESLEDSSEIIKNSMMEEPNINKIEADLGYPGGKARIIHKESDIITA FAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVDDDIEMETKSSEEFLVIHAHDDLA AVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVDYSNKFNGIRKELARKEMIKKAINNVR RMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRAGGNARVTRMRFNYQGNKFGIVDAD GYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLSTDNRNICLW DTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCVFDLRQRQQRQLFQSHD SPVKAIAVDPTEEYFVTGSAEGNIKIWSLSTFSLLHTFINEHARQSIFRNIGTGVMQIET GPANHIFSCGADGTMKMRILPDQFSPLNEVLKNDVKLML NT seq 9300 nt NT seq  +upstreamnt  +downstreamnt atgaacctgcaccaggtgctgacgggggccgtgaaccccggcgaccactgcttctccgtg ggcagcgtcggcgaccagcgcttcacggcttatgcatctggatgtgacattgtaatactg ggaagtgattttgaaagattacaaataataccaggagctaaacatggaaatattcaagta ggatgtgtagactgttcaatgcagcaaggcaagattgcagcatcctatggaaacatcatc tctatttttgaaccagttaacataccaaaacaaaagaaaaatttggaattatatagtcag tggcagaaaagtggccaattttttctggagtcaatagcacacaatataacttgggatccc acaggcaatcgtcttctaactggttccagctgtttacaactctggtccaacattaacttg gagaagccaactgaagaagaaaatccagataaaacagatcttgattttggggattggaga tgcatttggcattgcaaaacggcttcccaagttcatttaatgaaattttcaccagatgga gaattttttgccactgctgggaaggatgattgtcttttaaaggtatggtacaatgtggaa acctggcgaacatctgttacctctccagatacaagttcagaaaaacaatcccaaggagaa atcgacttttcttttgtttatctggcacatcctcgagctgtaaatgggttttcctggcgt aaaacgagcaaatacatgcctagggcttcggtatgtaatgtactgttgacctgctgcaaa gataatgtgtgtcgtctctgggtggagacatttttaccaaatgattgtttgctgtatgga ggtgactgcagccattggactgagccagttaatttaacaaataacttcaagaggaatgct tctaataaagagcgagttcaaaatgctatagaagtaaatctgagacactttcgtagaggt cataggaaatcacttgcattggtagccaataccggatatctgccccatcagcaggatcca catcttgtccacaggaacactccactgcatgccaatgcactttgccactttcatattgca gccagcatcaatccagccacagacattccacttctcccatctattacatctctgagttta agtgaaaatgaagagaagaggggaccttttgtggtacactggctaaacaataaagagctg cattttactttgtccatggaagtgtttttacagcaacttagaaaaagttgtgaacagcca tcttctgaggccagtggagaggactgtaatcagacagatgtaaaatctgatgaagaaatg gatgatgatgttgatgatgtgaaaataaatcatgaaaagaaggaatcaggcagtgataaa atggtaccaaacttaagttttgcaccattaccgtcagctgccattgatcatcagatcgaa atacttctgtctgagtggagtaaaaatgctgacatgcttttcagtatacatcccatggat ggttccttgctagtttggcatgtggattggctggatgaataccagcctggaatgtttcgt caagtgcaggtgtcgtttgtttccagaatacctgtagcttttcccacaggtgatgcaaac tctctctgtaaaagcatagtgatgtatgcgtgtaccaagaatgttgacttggctattcaa caagggaagcagaaaccttctggcctcactcgctccacatcaatgcttatctcttctggt cacaataaatcatcaaatagtttaaaattaagtatttttactcctaatgttatgatgatt tcaaaacacgatgatgggtctctgaaccaatggctggttagttttgctgaagaatccgct ttttctacagttctcagtatttcccacaaatccagatattgtggccatcgctttcatctg aatgatttagcttgccattcagtattaccattattactgacaacatcccatcataatgcg ttaaggacgccagatgtcgataacccaaagcaaccttatgctgtaaatattgaagagtgt tctttgacacaacaaaataaaagcactgttgatatggcattccaggatcccaatgcagtt tatagtgaacttattctttggagggtagatccagttgggccattgtctttttctggagga gtttctgaacttgcccggataaactctctgcatgtttctgccttttccaatgtggcatgg ctgcccactcttatacccagttactgtctaggtgcatactgcaactctcctagtgcatgc tttgtagcaagtgatggacagtatctgagattatatgaagcagtcattgatgctaagaaa cttttatgtgaactttccaaccctgaaatttctaggtttgttggtgaagtatttaacatt gttagtcaacaatcaacagccaggccaggatgtatcattgctttagatcccataaccaaa cttcatggcagaaaaacccagctgcttcatgttttccaagaagacttcattttgaataac cttgagaagaaaagtctgggaaaagatagcattttgtctgatgcaggcagctcacctaaa ggattttctgaaaaattctacctagttgtaatagagtgtactcaagagaaccgttcactg ttacacatgtggaatttacatttaaagtcagttcctgtctcattggatgaaaaagtagat aaaaaaaaatctgaagcagtttggcagccagaagatcactattcaccttctccagagaag atcccgtctcctttttcacagaagtatcaggcttgcagagcaaatctccagagcaccagc aagttaactctgttttcagagatggtgtatagccaggagctggatttgccagaaggagtt gagataatcagcgtgaagccatcagcaggacatctgagttcttcttccatatatcctgca tgcagtgctccttacttattggcaacttcctgctcagatgagaaagtaagattttggaga tgcagggtaacaaaaggagaatctgccacatcaaagaatgaaaacctggatcttgtgtat gtttgggaagaatggccattactaattgaagatggacttcagaccaatagtagtttaact gtacctggtaggcctgtagaagtgagctgtgcacacacaaatcgtttagcggtagcttac aagcagcctacatctagcagtaggtcatctcaggattttgtgatgcatgtaagtattttt gaatgtgagtccacaggaggttcatgttgggtccttgaacagacaattcatttagatgag ttaagcacagtgttggattctggcattagtattgatagcaatttagtagcctataataaa caagaggcatatttattcagtaaagagagtattgcattaaacacaaagcatttagttcac ttagattggatgtctagagaagatgggtctcatatcctgactgtaggaattggatcaaaa ctttttatgtatggacccctggctggcaaggtccaagaacagagtggtaaggaaagcctg gcctttcctctctgggagagcactagagttgtgcctctttccaaatttgtgcttttacga agtgtggacttggtttcttctgtagaaggctccccaccttttcctgtttccttatcgtgg gtacgggacggcatccttgtggtaggaatggattgtgaaatgcatgtatattcccagtgg caaccatcttccaagcaagaacctgttgtaacagattcattcagtgggagcactccttct ataataagtttaataaaacagagtaactcatccagttctgggttacatcctccaaaaaaa actctgactcgatctatgaccagtcttgcccagaagatctgtggaaagaaaacggcattc gatccttcagtggatatggaagattcaggtctttttgaagcagctcatgttctttcccca actttacctcagtaccaccctctgcagcttttggaactcatggaccttggcagagttcgg agagcaaaggccattttgtcacaccttgtcaagtgcattgctggggaagtcgtggctctg aatgaggctgaatccaatcatgaacgccgcctcaggtctctcaccatcagtgctagtggg agcaccagcagagacccccaggcatttaacaaggctgaaaatacggactacacagaaata gattctgtgcccccacttcctctgtatgccttacttgcagcggatgatgatagctgccac tcatctttggataagtctagtaatgagaataccttaaataaatccaaccaattgtcaaaa gaaagttatgatgagctttttcagaccccagctctaatgactgatactgatgtattagag acagatgaagaaaacatgaagcccaaagtcattgacctttcacaatacagtccaaattac tttggtcctgagcatgcccgggttctttctggacacttactgcactctagtttgccagga ctcactcggatggaacagatgtccctgatggccgtagcagatacaattgcaaccacgagc actgacattggagaaagcagagacagaagccaaggtggagaaactcttgatgaatgtggg ttaaagtttctgttggctgtgcgactccatacgtttcttacaacttcccttccagcatat cgagctcaactcgttcaccaaggcctgtctacttgtcactttgcttgggcatttcactca gtagcagaagaagaactgttgaacatgttgcctgcaatgcagagagatgatcccacttgg tctgagctaagagctatgggtgtggggtggtgggtccgcaatacccgcatcttacgcaga tgcatagaaaaagtagccaaagcagccttttatagaaagaatgatcctttagatgctgct attttttaccttgcaatgaaaaagaaagctgtgatttggggattatatagatctcaaaaa gacaccaagatgacacagttttttggacacaattttgaggatgagaggtggcgtaaagca gctttaaagaatgctttttctttgctgggcaaacaacggtttgaacattctgcagcgttt tttcttttagctggttgcctcagagatgcagttgaggtatgtcttgagaaactgaacgac attcagttagctcttgtgatagcaaggctctatgagtccgagtttgatacatcttcaaca tataaatccatcttatgcaaaaaggttttaggaattgattcttctgtcactgagttcagt tcagtaaacatgaatatgcattgtgatccttttcttcggagtatggcttgttggattttg gaagattatagtggtgctctggaaaccttaataaggcaacctgttagagaggatgatgat caagtcatgacatcagcctgcaatcctgcagtttttaatttttacaattatctaagaaca catcctcttttgctgagacgtcattttggatcatctgatacgtttcccacacacatgagt ttaacaggaaagagtggactggcaggaacaattagtttaagtgaaagaagactatttttt actactgccagtgctcatttaaaggccggctgccccatgttggccctggaagtcttatcg aagatgcccaaggtcatcacgaagacaaaagcattttataaagcatctagttttctggac acgggtagaggttcttctccactaaaattggatgcagaggaagataagtcttctgctgtt gattggtcagagtcattgataaatggttttgggtcctcgtcagagggttcatcagagaaa cagtccaactcagcactttcttttgactggagccaaccaagtgtcatatttcaggacgac tctttagagttaaaatgggacagtgataacgatgaagaaaatgaagacctccctctttca atgaaagaactaaaacctttacagagaaagatagataaaaaattggaggaagtaagttcc agttacacagaatctttcagcacaattaatgaaaatgatattttagatccatcagaagat ataattgcagtccagttaaaatttagagcatgtttaaagattctcacagtagaacttcgt actttatctactggttatgaaatagatggtggaaaattgcgttaccaactataccactgg cttgaaaaagaagtgatagctcttcagaggacttgtgacttttgctcagatgtggaagag ccaccgtctgcattaggcaaaagtggaggtgaattcggattaaatgaggacactgaagat ttgcttcaccaagcaaaagggaaacaattgagagaaaattttcaggaaaaaaggcagtgg ctcttgaaatatcagtctctcttgaggatgtttcttagttactgtgtacttcatggatcc catggtgggggtcttgcgtctgtgagaatggaattgattcttcttttacaagaatctcag caggaaacatcagaaccactgtttactagccctctgtcagagcaaacctcggtgcctctc ctctttgcttgtacagccagtgccaaaacagtagttgccaatccattgttacaccttagt aatctaactcatgatatcctgcatgccataataagctttgaatcaccaccccatcctgat ctccagagcaataaagtgtatgtaatgcacactttggcagcctcactttctgcttgtatt tatcagtgtctttgtggtagtcataactacagttcattacaaacaaatcagtttactgga atggtgtatcagacagtattgcttcctcatcgacattctttgaaaacaggaagcttagat gaagcaataactcccaatacatcaccagctcaatggccaggaataacttgtctaattcga cttttgaattcttcgggtgaagaagcccagtcagggcttacagtattactctgtgagatt ctcacagccgtgtatctgagtctcttcatccatggcctggcaacacattccagtaatgaa ctgtttcggattgtggcccatcctctaaatgaaaaaatgtggtctgctatatttggtgga ggtgcacatgttcctagcaaagaacagacagactcaaaaactttacctggaaggcacttt gctatgcctagtcctcaccaggtagtggtattctccatggagtgtgtgggcttttccaaa gctctctcagccatcagttctcatagtcctaccagtcctgcagtttcttcactagttgaa gaaggagaaaaacagaacaaacgtttcaggccatcaaacatgtcttgcagagcatctgcc ccactgaacccttcctcgccgccaggaagccgggagtcgctgacggtcagggagaagttc atcccgcctgagctcagtatctgggactatttcatagccaagccttttctacccccttcc caaagtagagcagaatatgactcagaggagagtatggaaagtggtgatgatgatgatgac gatgatatttcagcttcagattttcatctccaggagcattctaattcaaattcatatagc tggtcactgatgcgattggccatggtacaattggtgctgaacaatctgaagactttttat ccctttgcaggccatgatcttgcagaacttccagttagttcacctctttgtcacgcggtt ctaaaaactcttcagtgttgggaacaagttcttttccgacgccttgaaatctatggtggg ccacctcaaaactatattgcaagtcatacctctgaagagggtttatctgcaggtcctgca attcttcgccacaaagctttgttggaacctacaaacactcctttcaaatccagacaccac ctggcactgtctgtgaagagactttggcagtatttggtgaagcaggaaggaattcaggaa acctttatcagaaatatattcacaaagaaacgatgtctgaatgagtcattagaggacagc agtgaaatcatcaaaaattctatgatggaggagccaaacatcaataagatagaagcagat ttggggtatcctggaggtaaagcaagaattattcataaggaatctgatatcattactgca tttgctgttaataaagcaaatagaaactgcatagcaattgcttctagtcatgatgtgcaa gaactggatgtttccggaattctagctacgcagatctatacttgggtagatgatgatata gagatggaaaccaaaagctcagaagagtttctggttatccatgcccatgatgatttagca gctgttcaaggtaccaccccttacacgcatagcaatcctggcactcccatcaacatgccc tggcttgggagcacccagactggcagaggagcatctgtggattattccaataaatttaat gggatcagaaaagaattggcaagaaaggagatgattaagaaggccattaataatgtcaga agaatgacttctcatccaactcttccttactatctgacaggagctcaagatggaagtgtc agaatgtttgaatggggccattctcaacaaataacctgtttccgagctggtggcaatgca agagttacaagaatgagatttaattatcaaggaaataagtttggaatagttgatgccgat ggatatttaagtttgtatcagacaaactggaaatgttgtccagttactggaagcatgccc aaaccatacctgacttggcagtgtcataacaaaacagccaatgattttgtctttgtgagt tcctcttccctgatagctacagctggtctttcaaccgacaatagaaatatatgtttgtgg gatactcttgtagcaccagccaatagcttagtccatgcttttacctgccatgacagtgga gccacagttttagcgtatgctccaaaacaccagctgctcatatcaggaggaagaaaaggt tttacgtgtgtgttcgaccttcgccagcgacagcagaggcagcttttccagagccacgat tctcctgtgaaggccattgctgttgacccaactgaagaatactttgttacaggatctgcc gagggcaacatcaagatttggagtctgtctacctttagtcttctccacacttttatcaat gaacatgcccggcagtccatttttaggaatattggaactggagtgatgcaaattgaaaca gggccagcaaatcacattttctcctgtggagctgatgggacaatgaaaatgagaatactg ccggatcagttcagccctttaaatgaagtgctgaaaaatgatgtgaaattgatgctgtaa

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