Oryctolagus cuniculus (rabbit): 100346279
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Entry
100346279 CDS
T03373
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100346279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100346279
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100346279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
zf-B_box
Motif
Other DBs
NCBI-GeneID:
100346279
NCBI-ProteinID:
XP_008258586
Ensembl:
ENSOCUG00000011079
LinkDB
All DBs
Position
9:106266954..106296347
Genome browser
AA seq
942 aa
AA seq
DB search
MVRKRAAGGEPQGRKAPQAREARGQKAKGKSTARREKPEGVSEDEEAKPPKKSLPSRVSQ
GKRKRGCGGAAGAADGPAKKKAATAAVRSENLTAVKEEALSDDDFRDCPSDLRKAQPPER
RAPAGKGSDQGEEEESEDDWEEVEELTEPVLGDVGEPEASSQSTVPVSAVEIEIETPEQA
KMREKREKIKMEYETYIRRAMKRFHKEVHENTHKVHLLCLLANGFYRNSVCSQPDLHAIG
LSIIPTRFTKVPPGDVDVSYLSNLVKWFIGTFTVNAELSASERDNLQTTLERRFAIYSAR
DDEELVHIFLLILRALQLLTRLVLSLQPVPLKLSMAKGSRSSKKRPTEDPGGSSETSSQI
AENHPKPKTSKAAKGEETFPKGTGRPGARGRRSKAAAGSRQRAESSSSEEEGARKGKQKQ
ETPRRARGRQRRVASRVSYKEESGSDGADSSSDFEPSSGDDDSEPGPPRQRKTTAPQRTK
AGSKCGPRTPSGGRSKHAGIPEASSSSAGGKGSKKLSRDSEEHERGGAAGVDQWLEVFCE
QEAKWVCVDCVHGVVGQPLTCYRFATKPLSYVVGFDNEGWVRDVTQRYDPAWMTATRKCR
VDAEWWAQTLRPYQSPFVERQKKEDSEFQAKHLDQPLPTSIGTYKNHPLYALKRHLLKYE
AIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKA
RLAEPQLHDQNDLGLFGHWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLP
NLQRVARKLDIDCVQAVTGFDFHGGYCHPVTEGYVVCEEFKDVLLAAWENEQALIEKKEK
EKKEKRALGNWKLLAKGLLIRERLRLRYGAKSEAGAPRSDARGGLSSDEEEGTSSQAEAA
RILAASWPQNRAAEEEQKPQCTKKSKRGKKAEASHLFPFEKL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcaaacgcgccgcgggtggggagcctcagggacgcaaggcgcctcaggcacgc
gaggcgcgcggccaaaaggccaagggcaagagcacggcccggcgtgagaagccagagggt
gtctctgaagatgaggaagcaaaacccccaaagaagagtcttccctcgagagtctcccaa
gggaagaggaagagaggctgcgggggagctgcaggtgcagccgacgggccagccaagaag
aaggcggccacggcagctgttagatctgaaaacctcacggctgtcaaggaggaggccctg
agcgatgatgatttcagggactgtccgagtgacctccggaaggcacaacctccggagagg
cgggctcctgccggcaaaggcagtgaccaaggagaagaggaagaaagtgaagatgattgg
gaagaggtggaagaactgaccgagcctgtgctgggcgatgtgggagagccggaagcctcc
tctcagtccactgtacccgtgagtgcggtggagatagagattgaaacgccagagcaggcg
aaaatgagagaaaaaagagagaagataaaaatggagtacgagacatatatccggagggcg
atgaaacgttttcacaaggaagttcacgagaacacacacaaggttcaccttctgtgcctg
ctggcaaacggcttctaccgcaacagcgtctgcagccagccagatctgcatgccattggc
ctttccatcatccctactcgctttaccaaagtgcctcctggagacgtggacgtgagctac
ctctcaaacctggtgaagtggttcatcggaacgttcacagttaacgcggagctttcagcc
agtgagcgagacaacctgcagactacgctggaaaggagattcgccatctactctgcgcga
gacgacgaggagctggtccatatatttttactgattctccgggccctgcagctcctgaca
cgactggtgctgtctctccagccagttcctctgaagctgtcaatggcaaagggaagcaga
tcttccaagaagagacccacagaggatcctgggggctcctcagaaacttccagccagatt
gcagaaaaccatcccaaaccaaagacaagcaaagcagccaaaggagaggagacctttccg
aagggcactggcaggccgggtgcccgggggaggaggagcaaggccgctgcaggcagcagg
cagcgcgccgagtcctcctccagcgaggaagaaggcgcccgcaaggggaagcagaagcag
gaaactccaagacgggcgcgcggccggcagcggcgggtggcctccagggtgtcctacaaa
gaggagagtgggagcgacggggctgacagtagctctgactttgaaccctccagtggggat
gacgattccgagcctggccccccaaggcagaggaagaccacagctcctcagaggacaaag
gccgggtccaagtgtggccccaggaccccaagtggcggccgcagcaagcacgcaggcatc
ccagaagcgtcctcaagctctgcaggtgggaagggcagcaagaagttgtcgcgggacagt
gaggagcatgagcgagggggagcagctggcgtggaccagtggctggaggtgttctgtgag
caggaggccaagtgggtgtgtgtggactgtgtgcacggggtggtgggccagcctctgacc
tgctacaggttcgccaccaagcccctgagctacgttgtgggcttcgacaatgagggctgg
gtgcgggacgtcacccagaggtatgacccggcctggatgacggcaacccgcaagtgccgg
gttgatgccgagtggtgggcccagaccttgcgaccgtaccagagcccgtttgtggaaagg
cagaagaaagaagactcggagtttcaggcaaagcacctggatcagcccttgcccacctcc
attggcacgtacaagaaccaccctctgtatgccctgaagcggcacctcctcaagtacgag
gccatctaccccgagacggctgccatcctcggctactgtcgcggcgaggccgtctactcc
agggattgtgtgcatactctgcattccagggacacgtggctgaagcaggcgcgagtggtg
aggcttggagaagtgccctacaagatggtgaaaggcttttccaaccgtgcccggaaagcc
cggctcgccgagccccagctgcacgaccaaaacgacctgggcctgtttggccactggcag
acagaggagtatcagcctccggtggccgtggacgggaaggtgccccggaacgagttcggg
aacgtgtacctcttcctgcccagcatgatgcccatcggctgtgtccagctgaacctgccc
aatctacagcgcgtggcccggaagctggacattgactgtgtccaggccgtcactggcttt
gacttccatggaggctactgtcatcccgtcactgaagggtatgtggtatgtgaggagttc
aaggacgtgctcctggctgcctgggagaatgagcaggcactcattgagaagaaggaaaag
gagaaaaaggagaagcgggctctcgggaactggaagctgctggccaaaggactgctcatc
agggagaggctgaggcttcgctatggggccaagagcgaggcgggagccccccgctcggat
gccagaggtggcctttcttctgatgaagaggaggggaccagctctcaagcagaagcggcc
aggatcctggctgcctcctggcctcagaaccgagcagctgaagaagagcagaagccccag
tgcaccaagaagagcaagaggggaaagaaggcagaggcttcccacctgtttccatttgag
aagctgtga
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