Oryctolagus cuniculus (rabbit): 100346422
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Entry
100346422 CDS
T03373
Name
(RefSeq) ATP-binding cassette sub-family A member 17 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100346422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocu02000
]
100346422
Transporters [BR:
ocu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100346422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ABC2_membrane
DUF1673
Motif
Other DBs
NCBI-GeneID:
100346422
NCBI-ProteinID:
XP_051692150
LinkDB
All DBs
Position
Unknown
AA seq
1724 aa
AA seq
DB search
MKDMSPPPAGRMAVFQRLKLLLWKNFILKKRKTVVTVLEILMPFLFSAIILYLRFNSVPR
RRPASNYSAFDVNSLPELFFNYPQKSRLQLAYIPSQSEAVKAVTERVEQDFDVELEVLGF
SSVPVFENYIIKDHKAFYILTGIVFHHRFNDSNDPLPLEVQYSLRFSYIQRNFLPLRHLF
ILQNDPEGWCTSFLYPPNPLQEPRMYKQADGGSPGYNREGFLAIQHAVDKAVMWHHAHNT
AADMFGSLSVLLKRFPYGPFIQDRFFLVLQNEFPLLLMLSFICVELVIINSISLEKEKKL
KEYMCMMGLDNWLHWVAWFIMFFISVCIAVFVMTILFCIEVNGVAVFTSSDPILIFVFLM
CFAIATIFFAFMVSTFFQRAHVGTAVGGIFFFLTYLPYLYLTFNYQQRSHLQKILFCLLS
NVAMALGVRFISVLEAEGLGVQWKDVGSVRGEFNFTHVLLMLLLDSSLYCLVAWYVEAVF
PGKFGTPKPWYFFAMPSYWRGKPAPVTQTRLAVGVPEKSVTGKVLQEEPTDLMKGIEIQQ
LYKVFYKGRSEHIAVKGLTVNLYRGQITVLLGHNGAGKTMTCWMLTGLIPCSGGKAYING
YEISQDMAQIRKSMGWCPQHDILFDNLTVAEHLSFYAQLKGLSPHKCPEEVKQMLHVLSL
EDKRDSRCRFLSGGMKRKLSIGIALIAGSKVLILDEPTSGMDAISRRAVWDLLQQQKSDR
TILLTTHFMDEADLLGDRIAIMAKGELQCCGSPLFLKQKYGAGYYITLLKTPRCNTEALS
HLMYHHIPNAVLESSAGEEVIFILPRESVHRFESLFNDLELKQAELGIASFGASVTTMED
VFIRVCTLADSSVNLPGSKRSSLRPHPLVSRVPVDRIKHIHSRIYSIHSGLPIRLNTGFR
LLCQQFLAMLLKKAMHSWRGWMLMLSMQVLVPLLVIVLSLFLFSFKERSMASVPLALNLK
AYGRTVVPFSVPQNPRLDPQLSERFADMLVAQGQVPLEVPGSLETFLLKKAKEEPENFNK
FYLVAASFKDDGNQTIVTALFNNQAYHSPALALSLVDNFLFKLLSGNRASIITSNHPQPQ
SETEISESVLYQGPKGHYLVVNLLFGIAFLSSSFSILTVRERRIKAKHIQFVSGVYLWAY
WLSALLWDLISFLVPTLLMVVVFLYYNEEVFTHRGNILALVLMLILYGWAIIPLIYIISF
SFESASHACVKLVVMLTFLSIGPIMLVTVTAEQDLGYEAISENLDHAFLALPGHCLGMAF
CNLYYNFELQRFCSVKNLSQTECNEASEKYVVQKNIYAWESLGIGKYLTALAISGPVYII
LLFLIETSAFWTLKARLSDFCGKPSLAVPLNVPSAPEDQDVAKEAETIKMHLEKLCKKNP
LVVKEVSKVYENKVPVVAVNKVSFTVQAKECFGLLGLNGAGKTSIFKMLAGEKPITSGEA
FVRGISISSDLERVRKWIGYCPQFDALLNFMTGRETLVMYSRIRGIPECHISTCVDQILE
DLVLYMDADKLVKTYSGGNKRKLSTGIALLGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAVVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSRGQ
QEALRDFKAFVDLTFPGSVLEDEHQGMVHYHLPGHNLSWAKVFGLLEAAKNEYQLDDYSV
SQVSLEDIFLSVAYPMYRTQGQDQRGQTPPPPRSSAPPPAPALL
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacatgagccctcctccagctggcagaatggcggtgttccagaggctgaagctg
cttctctggaagaacttcatcctgaagaagcggaagacggtggtgacagtccttgaaatc
ttgatgccattcctgttctctgcgatcatattgtaccttcgtttcaacagtgtgccaaga
agaagaccagcttctaactacagtgcattcgatgtcaattcactcccagaactcttcttt
aattatcctcagaaaagcagacttcagctagcttacatcccttcccagagcgaggctgtg
aaggctgtcactgagagggtggagcaagactttgacgttgagcttgaagttctaggcttc
tcttcagtacctgtgtttgaaaattacataattaaggatcacaaagctttctacattctg
acaggaattgtttttcaccatagattcaatgacagcaatgaccctttgccacttgaggtt
cagtatagtttgcgcttcagttacattcagaggaattttttaccacttaggcatttgttc
attcttcaaaatgaccctgaaggctggtgcacatcctttctttatcctccgaatccactc
caagaaccccggatgtacaagcaagctgacggcggaagccctggatacaatagagaaggc
ttcctggccatccagcatgctgtggacaaggccgtcatgtggcatcacgctcacaacacg
gcagccgacatgtttggcagtctcagtgtgctgctgaagcgattcccgtatgggcccttc
attcaagacaggttcttcctggtgcttcagaatgagttcccgttgctcctcatgctcagc
ttcatctgtgtggagctcgtcatcatcaattccatttcgctggagaaagagaagaaactg
aaggagtacatgtgcatgatgggactggacaactggctgcactgggttgcttggttcatc
atgttcttcatctctgtctgcattgcggtttttgtcatgaccattctcttctgcatagag
gtgaatggtgttgcggtgttcacgagcagtgaccctattttgatatttgtttttctgatg
tgctttgccattgccacaattttttttgcattcatggtcagcacattcttccaaagagcc
catgttggaaccgccgtgggaggcatcttcttcttcctcacctacctcccgtacctgtac
ctcactttcaactaccagcagaggagccacctccagaagatcctcttctgtctcctgtcg
aatgtcgccatggcactgggggtccgattcatctccgtgttagaagcagaaggtctgggc
gtccagtggaaggacgtgggcagtgtccgtggagagttcaatttcacccacgtgctgctg
atgctcctgctggattcttccctctactgcttggtggcctggtacgtggaggccgtcttc
ccgggcaagtttggcacgcccaagccatggtacttctttgccatgccctcctactggcgt
ggaaaacctgcacctgttacccagacacggctggctgtgggcgttcctgaaaagtctgtg
accggcaaggtccttcaggaagagccgaccgacttgatgaaaggaatcgaaatccagcag
ctgtacaaggtgttttacaagggaaggagcgagcacatagcagtgaaaggtctcaccgtg
aatctttacagggggcagatcaccgtgcttctgggacacaacggagcagggaaaaccatg
acctgctggatgctcacaggtcttattccctgttcaggtggaaaggcatatatcaacgga
tacgaaatttcacaagacatggctcaaattaggaagagtatgggctggtgcccccaacat
gatatcttatttgataacctcacagtggcagaacatctttctttctatgcccagctgaaa
ggcctgtcgccccacaagtgccccgaggaagtcaagcagatgctgcacgtgctgagcctg
gaggacaagcgtgactcccgctgccggttcctgagcggggggatgaagcgcaagctgtcc
atcggcatcgccctcatcgcaggctccaaggtgttgattctggacgagcccacctcgggc
atggacgccatctccaggagggctgtctgggacctgctgcagcagcagaagagcgaccgc
accatcctgctgaccacccacttcatggatgaggccgacctgctgggggaccgcatcgcc
atcatggccaagggggagctacagtgctgcgggtcaccgctgttcctcaagcagaaatac
ggtgcaggatattatatcactttactgaaaacacctcgctgtaacacagaggcactttct
cacctgatgtatcatcacataccaaatgctgttttggagtccagcgctggagaagaagta
atattcatacttcctagagagagcgtgcacaggtttgaatctctgtttaacgacttggaa
ctgaagcaggcggagctgggcatcgccagcttcggggcctctgtcaccaccatggaggat
gtgttcattcgggtttgtacgttggcagactccagtgtaaatcttccaggcagcaaacgc
tcctctctccgtcctcatcccctggttagcagagttcctgttgacagaattaaacacatt
cattcaaggatctactccatacacagtggcctcccgatcagactaaatactgggttccgt
cttctgtgccagcagttcctcgccatgctcctgaagaaagcaatgcactcctggcgcggc
tggatgctgatgctgtcgatgcaggtcctggtgcctctgctggtcattgtgttaagcctc
ttcctcttcagcttcaaagaaaggagcatggcaagcgtccccctggcgctgaatctgaaa
gcatacggccggaccgtcgttccattctctgttcctcagaaccccaggttggaccctcag
ctttcagaacgctttgcagacatgcttgtggcccaggggcaggttcccctggaggtccca
ggttctctagagacattcctactgaaaaaggcaaaagaggaacccgagaattttaataaa
ttctaccttgtggcagcctccttcaaagacgatgggaaccaaaccatagtgactgcgctg
ttcaacaaccaggcgtaccactcccctgccctggctctcagcctggtggacaatttcctc
ttcaaattgctttctggtaacagggcttcgataatcacctccaaccatcctcaacctcag
tcagagacggagatctccgagagtgtcctgtaccagggccctaaaggacattaccttgtt
gtcaacttgctttttggaatagcctttctgtctagctcgttttccatcttgactgtcaga
gagcgccgaattaaggccaagcacatccagtttgtcagtggtgtttacttgtgggcttac
tggctctccgctctgctctgggacctcatctccttcctcgtccccactctgctgatggtg
gtggtgtttctgtactacaatgaagaagtgtttacacaccgtggaaacatccttgctctt
gtcttgatgttgattctctatggctgggctatcatccccctcatctacataatcagcttc
tccttcgaaagtgccagccacgcctgcgtcaagctggtcgtcatgctcaccttcttgagc
attggccccatcatgctggtcaccgtcacagccgagcaagacctgggttatgaagcaatc
tcagagaacctggatcacgcgttcctcgcactcccgggccactgcctggggatggctttc
tgcaacttatattacaactttgaactacagaggttttgtagtgtcaagaacctgagccag
actgagtgcaatgaagcttcagaaaaatatgtggtccaaaagaacatctacgcgtgggag
tccctagggatagggaagtacctgaccgccctggctatctcgggacctgtgtacatcatc
ctgcttttcctcatcgaaaccagcgcattctggacgctgaaagccaggctctctgacttc
tgcgggaagccaagtttggcagtgccgctcaatgtgccatcagcacctgaggaccaagat
gtggccaaggaagcagaaactatcaagatgcatttggaaaagttgtgcaagaaaaatccc
ctggttgttaaggaagtgtcaaaggtctatgagaacaaggtgcccgtggtggctgtgaac
aaggtatccttcactgttcaagcgaaagaatgctttggccttcttggcctcaatggagca
gggaagacttccattttcaaaatgctggccggggagaagccaataacttctggggaggcc
tttgtcaggggtatcagcatcagctctgacctagagagagtgcggaagtggattggctac
tgtccccagtttgatgctttgctgaacttcatgacaggccgtgagacactggtcatgtac
tcccggatccgaggcattcccgagtgccacatcagcacctgtgtggaccagattcttgag
gacttggtcttgtacatggatgctgacaagctagtgaagacctacagcgggggcaacaag
cgcaagctgagcacgggcatcgccctcctcggagagcctgcggtcatcttcctggacgag
ccgtccacgggcatggaccccgtggcccggcgcctgctctgggacactgtggcccgggcc
cgcgagtctggcaaggccgtcgtcatcacctcccacagcatggaggagtgcgaggccctg
tgcacccggctggccatcatggtgcagggtcagttcaagtgcctgggcagcccgcagcac
ctcaagagcaagttcggcagcggctactccctgcaggccaaggtccggagcagagggcag
caggaggcgctgcgggatttcaaggcctttgtggacctgaccttcccaggcagcgtcctg
gaagatgagcaccaggggatggtccactaccacctgcccggccacaacctcagctgggcg
aaggtgtttggccttctggaggcagctaagaacgagtaccagctggacgactactccgtc
agccaggtctcgctggaggacatcttcctgagcgtcgcctaccccatgtaccgcacacaa
ggccaggaccagcgtgggcaaacgccgcctccgccccgctcttcagcccctcccccagcc
cctgcccttctgtaa
DBGET
integrated database retrieval system
