Oryctolagus cuniculus (rabbit): 100346424
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Entry
100346424 CDS
T03373
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100346424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100346424
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100346424
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100346424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
100346424
NCBI-ProteinID:
XP_002723656
Ensembl:
ENSOCUG00000007138
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAMEMRLPVARKLPSESLGRDTKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGCV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEYKEEDAGGFIADLEPVSLADREVISRLRNC
VVALATQRMMLYDTSILYCYEASLPHQIKDILKPEITEEIVLETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgcgccttccggtggcgaggaagcttcccagcgagagtctggggcgt
gataccaagaagcacctggtggtgccgggggacacgatcaccacggacacgggcttcatg
cggggccacgggacctacatgggggaggagaagctcatcgcctccgtggccggctgtgtg
gagcgagtgaacaagctgatctgcgtgaaagcgctgaaaaccagatacaacggtgaagtc
ggagacattgtggtggggaggatcacagaggttcagcagaagaggtggaaggtggagacc
aactccaggctcgactcagtcctgctcctgtcgtccatgaacctccctggaggagagctg
agaaggaggtccgcggaggacgagctggccatgaggggcttcctgcaggaaggggacctc
atcagtgctgaggtccaggccgtgttctcggacggagccgtttctctgcacacgaggagc
ctgaaatacggcaaactaggccaaggtgtcctggtgcaggtgtcgccctcgctggtgaag
cggcagaagacccacttccacgacctgccctgcggcgcctccgtgatccttggcaacaat
ggcttcatctggatctacccgacccccgagtacaaggaagaggacgcggggggcttcatc
gcagacctggagcccgtgtccctcgccgaccgagaggtgatatcccggctccggaactgc
gtcgtcgcgctggccacccagaggatgatgctgtatgacaccagcatcctgtactgctac
gaggcgtccctgccgcatcagatcaaagacatcttaaagccagaaataacggaggagatt
gtattggaaacgcgccagagacttctggaacaggaaggctaa
DBGET
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