Oryctolagus cuniculus (rabbit): 100346504
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Entry
100346504 CDS
T03373
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04350
TGF-beta signaling pathway
ocu04360
Axon guidance
ocu04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100346504
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100346504
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100346504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100346504
Cell adhesion molecules [BR:
ocu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
100346504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
Tissue_fac
fn3_SORL1
Ig_4
Fn3_R-PTP-O
FAM176
EphA2_TM
Herpes_UL74
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
100346504
NCBI-ProteinID:
XP_051678252
Ensembl:
ENSOCUG00000002157
LinkDB
All DBs
Position
17:complement(439219..657667)
Genome browser
AA seq
1487 aa
AA seq
DB search
MDGTEPPLAGRCGGARRLWSLSARDLASIGFANDRVGSQWPSAARSGVGRWGRRCPLHLG
AGWSHCIPGAGVRTFTPFYFLVEPVDTLSVRGSSVILNCSAYSEPLPKIEWKKDGTFLNL
VSDDRRQLLPDGSLFISNVVHSKHNKPDEGYYQCVATVESLGTIVSRTAKLTVAGLPRFI
SQPEPSSAYAGNSAVLNCEVNADLAPFVRWEQDRQPLLLDDRVAKLPSGALVISNVTEAD
GGLYRCVVDSGGGPPKFSDEAELKVLADPEVPSDLVFLKQPPSLVRAVGQSVVLPCVASG
LPAPSIRWLKNEEALDTDSSERLVLLAGGSLEISEVTQDDAGTYSCVAGSGNETIEAQAE
LTVQAPPEFLKRPASLYAHESMDIVFECEVTGKPAPTVKWVKNGDVVIPSDYFKIVKEHN
LQVLGLVKSDEGFYQCIAENDVGNAQAGAQLVILEHAPATTGPLPSAPRDVVASLVSTRF
IKLTWRTPASDPQGDSLTYSVFYTKEGTARERVENTSRPGEMQVTIQNLMPATVYIFRVT
AQNRHGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEIQNYKL
YYLEKGTDKEQDIDVSSHSYTLNGLKKHTEYTFRVVAYNKHGPGVSTQDVTVRTLSDVPS
AAPQNLSLEVRNSKSIVVHWQPPPPATQNGLISGYKIRYRKASRKSDVTETLVVGTQLSQ
LIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSI
VVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNH
VGEGIPLYESAVTRPHTDTSEVDLFVVNAPYTPVPDPTPMMPPVGVQASILSHDTVRVTW
ADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTK
GRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYY
STDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA
DSSDKMPNDQASGSAGKGSRLPDLGSDYKPPVSGSNSPHGSPTSPLDSSVLLVLIVSVGV
VTIVAVVVVAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNAKDVKPPDLWIHHERLELKP
IAKSPDPNPIMTDTPIPRHSQDTTPAGTSSDGSTHQRRNSYRGHESEDSMSTLAGRRSMR
PKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASAARSHLHHPGSPWPVATSMSLS
DRANSTESVRNTPSTDTMPASSSQTCCADHQDPEGATSSSYLASSQEEDSGQGLPTAHVR
PSHPLKSFAVPAVPPPGPPTYDPALPSTPLLSQQALNHHLHAVKTASIGTLGRSRPPMPV
VVPSAPEVQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggatggcactgagccgcccctcgctgggcgttgcggcggcgcccgccgcctgtggtca
ctctcagcccgcgacttggcgagcatcggatttgcaaatgaccgtgtaggaagccagtgg
ccctcggcagcccggtccggtgtcgggcggtggggtcgacgctgcccgctgcatctcgga
gccggctggagccactgcattcccggagccggtgttcggacgttcactccgttttatttc
ctcgtggagccagtggacacactctccgtcagaggctcatctgtcatattaaactgctct
gcgtattctgaaccgcttccgaaaatcgaatggaaaaaagatgggacgttcttgaactta
gtgtcagatgatcgacgccagcttctcccagacgggtctttatttatcagcaacgtggtg
cattccaagcacaataaacccgatgaaggttattaccagtgcgtggccactgttgagagc
cttgggactattgtgagcagaacagccaagctcacggtagcaggtcttccaagatttatc
agccagccagagccttcctcagcttacgctggaaacagtgccgtcctgaattgcgaagtg
aatgcagatttggcccccttcgtgaggtgggaacaggacagacagccccttcttctggat
gacagagtcgccaagcttcctagcggggcactggtcatcagcaacgtgaccgaggcagac
gggggcctttaccgctgcgtggtcgacagcggcggcgggccacccaagttcagtgacgaa
gcggaactgaaggttcttgcagatcctgaggtgccgtcagacttggtgtttctgaagcag
ccgccttccttggtcagagccgttggtcagagcgtggtgttgccttgtgttgcctcggga
ctgcctgctcccagcatcagatggttgaaaaatgaggaggcactcgacacagacagttct
gagagactggtcctcctggcagggggtagcctggagatcagtgaagtcactcaggacgat
gccgggacttactcctgcgtagcgggcagtggcaacgagacgatcgaagctcaggcggag
ctcacagtacaagctccccccgagttcctcaagcgaccggccagtctgtatgctcacgag
tccatggatatcgtgttcgagtgtgaagtgactgggaaaccagctccaactgtgaagtgg
gtcaaaaatggggacgtggtgatcccaagtgattacttcaagattgtaaaggaacacaac
ctgcaggttttagggctggtgaagtcggatgaagggttctatcagtgcattgctgagaac
gatgttgggaacgcgcaggctggagcccagctggtcatcctggagcatgcgccagccacg
acgggaccactgccctcggctcctcgggatgtcgtggcctccctggtctcgacccgcttt
atcaagctgacgtggcggacgcctgcgtcggaccctcagggagacagcctcacctactct
gtgttctacaccaaggaggggactgctcgggagcgtgttgaaaataccagtcgcccagga
gagatgcaagtaaccattcagaacctaatgccagcgacggtgtacatcttcagagtcacg
gctcaaaacaggcatggctctggcgagagttcggccccgctgcgtgtggaaacgcagcct
gaagtccagctccctggcccagcacctaacatccgagcgtacgcgacgtcccctacctcc
atcactgtcacctgggagacgccgttgtctggcaatggagagattcagaactacaaattg
tactacctggaaaaggggacggacaaggaacaggacatcgacgtttcaagtcactcctac
acccttaacgggctgaaaaagcataccgagtacaccttccgagtggtggcctacaataag
cacggccccggggtgtccacgcaggacgtcactgtgcggaccctgtcagacgttcccagt
gctgctcctcagaatctgtctttagaagtgagaaactcaaagagcatcgtggttcactgg
cagccccctcccccagccacacagaacgggctcatctctggctacaagattcgctaccga
aaggcttcccgaaagagtgatgtgaccgagaccttggtagtgggaacgcagctgtctcag
ctgattgaaggtctcgatcggggtactgaatataacttccgagtggctgctctaacgatc
aacggtacaggcccggcgactgactggctctctgctgaaacctttgaaagtgacttggat
gaaacccgtgttcccgaggtacccagctctcttcatgtccgccccctcgtaactagcatc
gtcgtgagctggacgccgcctgagaaccagaacattgtggtcagaggctatgccatcggg
tatggcattggcagtccccacgcccagaccatcaaggtggactataaacagcgctattac
accatcgagaatctcgacccgagctcgcactatgtgatcacgctgaaagcgttcaaccac
gtgggcgaaggcatccccctgtacgagagtgccgtgaccaggcctcacacagacacttct
gaggttgatttatttgttgttaatgctccatacaccccagtgccagatcccacccccatg
atgcctcccgtgggagttcaggcttccatcctgagtcatgacaccgtcagggtcacgtgg
gcagacaactcgctgcccaaacaccagaagatcaccgactcccgctactacacggtgcgg
tggaaaaccaacatcccggcaaacaccaagtacaagaatgcaaatgcgacaactttgagt
tacctggtgactggtttaaaaccaaacaccctgtacgaattctctgtgatggtgaccaaa
ggtcgaaggtcaagcacgtggagtatgacagcccatggaaccacctttgagttggttcct
acttctccgcccaaggatgtgaccgttgtgagtaaggagggcaaacccagaaccataatt
gtgaactggcagcctccttcggaagccaacggcaaaattacaggttacatcatctattac
agcacggacgtgaatgccgagatccacgactgggtcattgaacccgtcgtggggaacagg
ctgactcaccagatccaggagctgacgctcgacacgccgtactacttcaagatccaggcc
cgcaactccaagggcatggggcccatgtctgaggccgtccagttcaggacccctaaagcg
gactcctctgataaaatgcccaatgaccaagcctcagggtctgcgggaaaaggaagccgg
ctgccagacctgggatccgactacaagcctccagtgagcggcagcaacagccctcacggg
agccccacctccccgctggacagcagcgtgctgctggtgctcatcgtctccgtgggcgtc
gtcaccatcgtggcggtcgtggtcgtcgccgtcttctgcacgcggcgcaccacctctcac
cagaagaagaaacgcgctgcctgcaaatccgtgaacggctcccacaagtacaaagggaac
gccaaggacgtgaagcccccggacctgtggatccaccacgaaaggctggagctgaagccc
atcgccaagtctccagaccccaaccccatcatgacggacacgccgattcctcggcactcg
caggacaccacgccggcgggcacgtcctcggacggcagcacccaccagaggcggaattcc
taccgagggcacgagtcagaggacagcatgtctacactggctggaaggcggagcatgaga
ccaaaaatgatgatgccgtttgactcccagccgccccagcccgtgattagtgctcatccc
atccattccctcgataaccctcaccatcatttccactccagcagcctcgcttccgcagcc
cgcagccacctccaccacccaggcagcccatggcccgtggccacatccatgtccctttca
gacagggccaattccacagagtccgtgcgcaacacacccagcaccgacaccatgccagcc
tcctcgtcccagacgtgctgtgccgaccaccaggacccggaaggtgctaccagctcctcc
tacttggccagctcccaagaggaggattcgggccagggtcttcccacggcccacgtccgc
ccttcccacccgctgaagagcttcgcggtgccggcagtcccgccgccggggccccccacc
tatgatcccgcgttgccaagcacaccgttactgtcccagcaagctctgaaccaccacctt
cacgccgtgaagacggcctccatcgggactctgggaaggagccggcctcctatgcccgtg
gtggttcccagtgcccccgaggtgcaggagaccacccggatgctggaagactccgagagt
agctacgaaccagatgagctgaccaaagagatggcccacctggaaggactcatgaaggac
ctgaacgctatcacgaccgcgtga
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integrated database retrieval system