Oryctolagus cuniculus (rabbit): 100346785
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Entry
100346785 CDS
T03373
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocu03009
]
100346785
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
90S particles
Other 90S particles
100346785
Pre-60S particles
Other pre-60S particles
100346785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
WD40_Gbeta
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WDR54
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
100346785
NCBI-ProteinID:
XP_002711466
Ensembl:
ENSOCUG00000002724
UniProt:
G1SI62
LinkDB
All DBs
Position
4:complement(96328372..96356443)
Genome browser
AA seq
499 aa
AA seq
DB search
MNRSRQVTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQEEGASEEEEAGSPSDD
GVQSARTQARPREPLEDGDPEDDRALDDDELAEYDLDKYDEDDPDAETLGESLLGLTVYG
SNDQDPYVTLKDTEQYEREDFLIKPTDNLIVCGRAEQEQCNLEVHVYNQEEDSFYVHHDI
LLSAYPLSVEWLNFDPSPDDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKK
KKKGKKSSSAEGHTDAVLDLSWNKLIRNVMASASADNTVILWDMSVGKPAASLAVHTDKV
QTLQFHPFEAQTLISGSYDKSVALYDCRSPDESNRMWRFSGQIERVTWNHFSPCHFLAST
DDGFVYNLDARSDKPVFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPSL
VHSRDMKMGVLFCSSCCPDLPFVYAFGGQKEGLRVWDISTVSSVNEAFGRRERLVLGSTR
SSSVSGPFGSRSSDTPMES
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagccgccaggtgacgtgtgtggcctgggtccgctgcggcgtggccaaagag
acgccggacaaggtagagctgagtaaagaagaagtgaaacgtctcattgctgaagcgaag
gaaaagttacaagaagaaggtgccagtgaggaagaggaggcaggcagcccttcagacgat
ggtgtgcagagtgcacgcacgcaggcgcgcccgagggagcccctggaggatggtgaccca
gaggacgacagggcgctggacgatgatgagctggccgagtacgacttggataaatatgac
gaggatgacccagatgctgagacgcttggggagtcgctgctggggctgacagtctacggg
agtaatgaccaagatccgtatgttactctgaaagatactgaacaatatgaacgtgaagat
ttcttgattaaacccactgacaatctcatagtttgtggtcgagctgaacaggagcagtgc
aatttggaggtgcatgtttacaatcaggaagaagactctttttacgtgcaccatgatatc
ctgttgtctgcatatcctctgagtgtagagtggctgaattttgatccaagtccagatgat
tctacaggaaattacattgcggtgggaaacatgacccctgttattgaagtttgggacctt
gacatagtggactctttagagccagtcttcacacttggaagtaagctttcaaaaaagaag
aaaaagaaagggaagaagagttcctcagcagaagggcataccgatgctgtccttgatctg
tcgtggaataagctcatcagaaatgtgatggcaagtgcctcagccgacaacacggtgatt
ctgtgggatatgtctgtgggaaaaccagcagctagcctggccgtgcacacagacaaggtc
cagactctgcagtttcatccgttcgaagcacagacgctgatatctggatcgtatgataag
tcggtggctttatatgactgccggagtccagatgagagcaatcggatgtggcgcttcagc
gggcagattgagagagtgacttggaatcacttctcaccttgtcattttttggccagcacg
gatgacggctttgtgtataatttggatgcacgttcagacaagccggtttttacacttaat
gcacataatgatgaaatctctgggcttgatctcagcagtcagatcaagggctgtcttgtg
actgcatcagcagacaaatacgtgaagatctgggacatactgggagacaggccgagtctg
gttcattcccgggacatgaaaatgggagttctcttctgttcctcctgttgccctgatcta
ccatttgtttacgcctttggaggtcagaaagaaggacttcgggtctgggacataagcacg
gtctcgtcagtaaatgaagcgtttggaagacgagagcggcttgttctcggcagcacgaga
agttcatctgtcagcggccctttcggaagcaggagctcggacacgcccatggagtcttaa
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