KEGG   Oryctolagus cuniculus (rabbit): 100347149
Entry
100347149         CDS       T03373                                 
Name
(RefSeq) tapasin-related protein isoform X1
  KO
K28445  tapasin-related protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04612  Antigen processing and presentation
ocu05163  Human cytomegalovirus infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    100347149
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100347149
   05168 Herpes simplex virus 1 infection
    100347149
   05163 Human cytomegalovirus infection
    100347149
   05169 Epstein-Barr virus infection
    100347149
SSDB
Motif
Pfam: V-set C1-set ig Ig_3 Ig_2 I-set C2-set_2 Ig_VSIG10L2_N
Other DBs
NCBI-GeneID: 100347149
NCBI-ProteinID: XP_008257950
Ensembl: ENSOCUG00000008163
LinkDB
Position
8:complement(79122081..79131780)
AA seq 445 aa
MRRGRGWLLIPDQAQRGERLSDWQKPGAAEGQWRAVDVVLSCFLAVEDRHRGAFAGTANR
EKALLVLRQVPVLDDGSLEGFTDFTVAQDDPPVIFEASVDQVQIPQAGALLHADCSGRDL
TCEISHYHLQARQEASVEKAAWFISNVQVSGGGPSVSMVMKALRDAENGAALHPTLKLPL
SSQGTVRTTVEFQATTRTQSLNALLGSSVSLHCSFSMAAGLDLISVEWRQQHKGSGQQVY
IWTTGKGQAKRDGATLEPEQLHVARNASLTLPGLTVKDEGVHICQITTSLYQVQQNIQLN
IQASPKVRLSLANTAVPPTLICSIAGYYPLNVAVTWTREEPAGAAVQVSGASFSSLRQSP
AGTYTISSSLTADPGPAGATYTCQVTHISLEEPLVASTWVAPAGETTASGFVFASSLFLL
ALLFLGFQRWQATSARAAKAPRHSE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcgaaggggccggggatggcttctgatccccgatcaagcccaaaggggagagaggctc
agtgactggcaaaagcccggtgcagcagaagggcagtggcgggctgtggatgtggtcctc
agttgcttcctggcagtggaagacaggcaccgtggagcttttgcaggcactgccaacagg
gagaaggccttgctcgtgctgaggcaggtgccggtgctggatgacggctccctggaaggc
ttcaccgacttcactgtggcccaagatgacccccctgttatcttcgaggcctcggtggac
caggtgcagattccccaggccggggccttgctccacgccgactgcagtggcagggacctg
acctgtgagatctcccactatcacctccaggccagacaggaggccagtgttgagaaagca
gcgtggttcatcagtaacgtgcaggtgtctggagggggacctagcgtctccatggtgatg
aaggctctcagagacgctgagaatggggctgccctgcaccccacgctgaaactgccgctg
agctcccagggaactgtgcggaccacagtggagttccaggcgacaacaaggacccaatcc
ttgaatgccttgctggggtcctcggtctccctgcactgcagcttttccatggcagcaggc
ttggacctcatcagcgtagagtggcggcaacagcataagggcagtggccagcaggtgtac
atctggaccacaggaaaggggcaggccaagcgagatggtgctaccctggagccggagcag
ctacacgtggccaggaatgcctccctcacccttcccgggctcactgtaaaggatgagggg
gtccacatttgccagatcaccacctcactgtaccaagttcaacaaaacatccagcttaac
atccaagcttcccccaaagtacgactgagcttggccaacacagccgtgccacccaccctc
atctgcagcattgctggctattaccctctgaacgtggcagtgacgtggacccgagaggag
ccagccggagccgcagtccaagtctccggtgcctccttctccagccttaggcagagcccg
gctggcacctataccatctcctcctccctcacagcagaccccggccctgcaggcgccact
tatacctgccaggtcacccacatctccctggaggagcccctcgtggccagcacctgggtg
gccccagcaggggagacaacggcctctggattcgtctttgccagcagcctcttccttctc
gcactgttgttcctggggtttcagagatggcaggccacctcagcaagagctgccaaggcc
ccgaggcattctgagtag

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