Oryctolagus cuniculus (rabbit): 100347251
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Entry
100347251 CDS
T03373
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocu03016
]
100347251
Enzymes [BR:
ocu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
100347251
Transfer RNA biogenesis [BR:
ocu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100347251
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
CoV_S2
Motif
Other DBs
NCBI-GeneID:
100347251
NCBI-ProteinID:
XP_002715882
Ensembl:
ENSOCUG00000023095
UniProt:
G1U3B6
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Position
13:complement(64218352..64238796)
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AA seq
479 aa
AA seq
DB search
MAASAPTPPATGFPAEGRCGYFVEKKKRFCRMVVAAGKRFCGEHAGAAEEENTRKRILCP
LDPKHTVYEDQLAKHLKKCNAREKPKPDFFIQDINAGLTDETEILEQLVPISSLSEEQLE
NLIKKLRKASEGLNSTLKHHIMSHPALHDALNDPNNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKGTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPVLREGKLPVVGIGKHLCGVATDLALRCLIETYAASCEERNEEPLAKRIK
NDKTEKEINTLAKERNENIVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRTLGLGAVE
FHYFQRMSSWATCGMRKTSLETSTMTTQPKGNQKDDEEHDDGGYRITDDSADSLPGLLTV
EEKKKIGHLCKLLIDQGRVKYLQQKGFSPALQYYTDPLVSLENVLLTALPNHSSPETTA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgcccaccccgccggcgactggttttccagcggaaggtagatgcggt
tactttgtggaaaagaagaagcggttctgcaggatggtggtggccgccgggaaaaggttc
tgtggcgaacacgccggagccgcggaggaagaaaatactcgtaaaagaatcctgtgtcct
ttagatccaaaacacacagtatatgaagatcagctagcaaagcatttgaaaaaatgtaac
gcaagagagaagccaaaacctgatttctttattcaagatattaatgcaggcttaacagat
gaaacagaaatactcgaacaattagtcccaatttcttctctatctgaagagcagttggaa
aacttaattaagaaattgaggaaagcaagtgaaggtttgaattctacacttaagcatcat
attatgtcccatccagcattacatgatgcccttaacgaccctaataatggtgattctgca
accaagcacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgttttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatccttgtagaaaaggggaccaca
agattcaaggtagatggtaaacacagaaagaaaaactcagtatttgaaagactgcaaatt
gatattcaacacttgtgtctgaacaaaattcctgtgctgagggaaggaaaactacctgtg
gtaggaattggaaagcatctgtgtggagtggcaacagatcttgcattacgatgtttgatt
gaaacctatgctgccagttgtgaggaaagaaatgaagagcctttagccaaacgcataaag
aatgataaaacagaaaaagaaattaacactttggccaaggaaagaaatgaaaatattgtt
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcaggactttaggcctgggagcagtggaa
ttccactatttccagcgaatgagtagctgggcgacttgtgggatgcggaagacatctttg
gaaacctcaactatgaccacacagccaaagggtaatcagaaagatgatgaagagcatgat
gatggaggatacaggatcacggatgacagtgctgatagtttgcctgggcttcttactgtt
gaagaaaagaagaaaatagggcacctctgtaaattgctgattgatcaaggccgagtcaag
tatttgcagcagaaaggattcagtcctgctttacagtactatacagatcctctggtgtct
ttggaaaatgtgttgttaaccgctttaccaaaccattcatcgccagaaacaactgcttaa
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