Oryctolagus cuniculus (rabbit): 100347324
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Entry
100347324 CDS
T03373
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04151
PI3K-Akt signaling pathway
ocu04510
Focal adhesion
ocu04512
ECM-receptor interaction
ocu04518
Integrin signaling
ocu05165
Human papillomavirus infection
ocu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100347324
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100347324
04518 Integrin signaling
100347324
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100347324
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100347324
09172 Infectious disease: viral
05165 Human papillomavirus infection
100347324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocu00536
]
100347324
Glycosaminoglycan binding proteins [BR:
ocu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100347324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Tenascin
FN3_DSCAM-DSCAML_C
EGF_Teneurin
Fn3_Dep-1_3rd
EGF_2
Pur_ac_phosph_N
Fn3_VIN3
FN3_Tor_3rd
DUF7949
Motif
Other DBs
NCBI-GeneID:
100347324
NCBI-ProteinID:
XP_051712926
Ensembl:
ENSOCUG00000017799
LinkDB
All DBs
Position
13:complement(2867486..3299497)
Genome browser
AA seq
1359 aa
AA seq
DB search
MGVEGETVALKNMLIGVNLVLLGAMLKPSECQLEVTTERVQRRAVEGEGGVASYNTSSKD
QPVLFNHVYNINVPLDSLCSSSGLEASAEQEVSAEDETLAEYTGQTSDRESQVTFTHRIH
LPKKACPCAGSAQVLQELLSRIEMLEREVSVLRDQCSTNCCPESAATGQLDSTPHCSGHG
NLSLESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDC
SSRGLCVDGDCVCEEPYTGVDCRELRCPGDCSGKGTCANGTCVCQEGYVGEDCGQRRCLN
ACSGRGHCQEGLCICEEGYEGPDCSAVAPPEDLRVAGISDRSLELEWDGPMAVTEYVISY
QPAALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQ
GLQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEE
YIVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRARVDFILLKYG
LVGGEGGKTTFRLQPPLSQYSVQALRPGSQYEVSVSAVRGTNESDATTTRFTTEIDAPKN
LRVGARTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHETLVPKSMGPTTRATLTDLVPG
TEYGVGISAIMNSQQSVPATMNARTELDNPRDLMVTASSETSISLIWTKASGPIDHYRIT
FTPSSGVASEVTVSKDSTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISH
LHFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEDEMMEVSLDATKRHAVLMGLQPATE
YIVNLMAVHGTETSEPIVGSITTGIDPPKDITISNVTKDSVTVSWSPPVASFDYYRVSYR
PTQVGRLDSSVVPNTVTEFTISRLNPATEYEISLNSVRGREESERICTLVHTAMDNPVNL
VATNITPTEALLQWKAPAGEVENYVIVLTHFAVAGETILVDGVSEEFQLVDLLPSTHYTV
TMYATSGPLTSGAISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYVLTYKSAD
GSRKELIVDAEDTWIRLEDLLESTDYTVLLQAAQETSRSSTTSTAFSTGGRMFPHPQDCA
QHLMNGDTLSGVYTIFLNGELNQKLQVFCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRV
GFGNLEDEFWLGLDNLHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDSRSLYKLRIGA
YNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQ
GINWYHWKGHEFSIPFVEMKMRPYNHHLAAGRKRRALQF
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggagggggaaacagtggccctgaagaacatgctcattggcgtcaacctggtc
ctgctgggcgccatgctcaagccctcggaatgtcagctggaggtcaccacggagagagtc
cagcgacgggcagtggagggggaaggaggtgtcgccagctacaacacgtccagcaaggat
cagcctgtgctcttcaaccacgtgtacaacattaacgtgcccctggacagcctctgctcc
tcctccgggctggaggcctccgccgaacaggaagtgagtgctgaagacgagactctggcc
gagtacacggggcagacctcagaccgcgagagccaggtcaccttcacccacaggatccac
ctccccaaaaaggcctgcccgtgcgcgggctcggcacaggtgctgcaggagctgctgagc
aggattgagatgctggagagggaggtgtcggtgctgcgggaccagtgcagcaccaactgc
tgcccggaaagcgcggccacaggacaactggactctacccctcactgcagtggccatggc
aaccttagcctcgagtcctgcggctgcatctgcaatgaaggctggtttggcaagaactgc
tcagagccctactgcccgctgggctgctccagccggggcgtgtgtgtggatggccagtgc
atctgtgactctgagtacagcggggacgactgctccgagctccggtgcccgacagactgc
agctcccgggggctgtgtgtggacggggactgtgtctgtgaagagccctacacgggcgtg
gactgcagggagctgaggtgccccggggactgttcggggaaggggacatgcgccaacggc
acctgtgtatgccaggagggctatgttggcgaggactgcggccagcggcggtgtctgaac
gcctgcagtggccgcggacactgccaggaggggctctgcatctgtgaggaaggctacgag
ggccctgactgctcggcagttgcccctccagaggacttgcgagtggctggtatcagcgac
aggtcccttgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttac
cagccggcggccctggggggcctccagctccagcagcgggtgcctggagattggagcggt
gtcaccatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcatt
agcaacatcctcagccttcccatcactgccaaggtggccactcatctctccactcctcaa
gggctacaattcaagaccatcacagagacaaccgtggaggtgcagtgggagcccttctca
ttctctttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggagtgatt
gctcagctccccagtgatgttacctcctttaaccagacaggactgaaacctggggaagaa
tacattgtcaatgtggtggctctgaaggaacaagcccggagccccccgacttcagccagc
gtctccacggtcattgatgggcccacgcagatcctggttcgagacgtctctgacactgtg
gcctttgtggagtggaccccaccccgagccagagtcgatttcattctcctgaaatacgga
ttggtgggtggggaaggcgggaagaccaccttccggctacagcctcccctgagccaatat
tcggtgcaggccctgcggcccggctcccagtatgaggtgtcggtcagtgcagtccgaggg
accaacgaaagtgatgccacaaccacccggtttacaacagagattgatgctcccaagaac
ttgcgggttggcgcccgcacagcaaccagcctcgacctggagtgggacaacagcgaggcc
gaggttcaggagtacaaggtggtgtacagcaccctggccggtgagcagtaccatgagacg
ctggtccccaagagcatgggtccaaccaccagggccactctcacagatctggtacctggc
actgagtatggagttggaatatctgccatcatgaactcacagcaaagtgtgccggccacc
atgaatgccaggactgaactcgacaatcccagagacctcatggtgacagcctcctcagag
acctccatctccctcatctggaccaaggccagtggccccatcgaccactaccgaattacc
ttcactccttcctccggagttgcttcggaagtcaccgtgtccaaggacagcacctcgtac
acactgaccgacctggagcctggggcagagtatatcatttccatcaccgctgagaggggt
cggcagcagagcctggagtccactgtggatgccttcacaggtttccgccctatctcccat
ctgcacttctcccatgtgacttcctccagcgtcaacatcacctggagcgacccctctccc
ccagcagacagactcatcctgaactacagcccccgcgacgaagaggacgagatgatggag
gtctccttggacgccaccaagaggcacgctgtcctgatgggcctgcagccggccaccgag
tacatcgtcaacctcatggccgtccatggcacggagacctctgagcccatcgtgggctcc
atcaccacaggaatcgatcccccgaaggacatcacgattagcaacgtgaccaaggactca
gtcacggtctcctggagccctcctgttgcttcttttgattactaccgcgtgtcttatcgc
cccacccaagtgggacggctggacagctcggtggtgcccaacacagtgacagaattcacc
atcagcagactgaacccagctaccgaatacgaaatcagcctcaacagcgtgcggggccgg
gaggagagtgagcgcatctgcaccctggtgcacacagccatggataaccctgtgaatctg
gtggctaccaacatcactcccacggaagccctgctgcagtggaaggcgcccgcgggagaa
gtagagaactacgtcatcgttctgacacactttgcagttgctggagagaccatcctggtt
gacggggtcagtgaggaattccagctggttgacctgctccctagcacccactatactgtc
accatgtatgccaccagcgggcctctcaccagtggagccatcagcaccaacttctccacc
ctgctggaccctcctgcaaacctgaccgccagtgaggtcacccgacaaagtgccctcatc
tcctggcagcctcccagggcagagatcgagaactacgtcttgacctacaaatccgccgat
ggaagccgcaaggagctgattgtggacgcagaggacacgtggatccgactggaggacctc
ctggagagcacagactacacagtgctcctgcaggcagcccaggaaacctcccggagcagc
acaacctccaccgccttcagtacagggggccgaatgttccctcaccctcaagactgtgcc
cagcacttgatgaatggagacaccctgagtggggtgtacaccatcttcctcaacggggag
ctgaaccagaagctgcaggtgttctgcgacatgaccacggacggcggcggctggatcgta
ttccagaggaggcagaacggccaaacagactttttccggaaatgggctgattaccgcgtt
ggcttcgggaacctggaggacgaattctggctcgggctggacaacttacacaggatcaca
agccagggccgctacgagctgcgcgtggacatgcgggacgggcaggaggcggccttcgcc
tactacgacaagttctccgtggaggacagccgaagtctgtacaaactccgcataggcgcc
tacaacggcactgcaggggactccctcagctatcaccagggacgccctttctccacagag
gatcgggacaacgatgtcgcagtgaccaactgcgccatgtcgtacaagggcgcctggtgg
tataagaactgccaccggaccaacctcaacgggaaatacggggagtccaggcacagtcag
gggatcaactggtaccactggaaaggccacgagttctccatcccctttgtggaaatgaag
atgcgtccctacaaccaccatctcgcggcagggaggaaacggcgggccttgcagttctga
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integrated database retrieval system
