KEGG   Oryctolagus cuniculus (rabbit): 100347339
Entry
100347339         CDS       T03373                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100347339
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100347339
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100347339
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100347339
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT HEAT_2 TOR1L1_N INTS7_N HEAT_EZ
Other DBs
NCBI-GeneID: 100347339
NCBI-ProteinID: XP_008268518
Ensembl: ENSOCUG00000007776
UniProt: G1STS3
LinkDB
Position
18:complement(42574238..42602912)
AA seq 1030 aa
MAAAAAPQEAAAPTGPLWGLVQDFVMGQQEGPADQVAADVKSGSYSVLQVVEALGSSLEN
PEPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLC
VTLPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYSIITNFMQIREEELKGLGADFTFGFIQ
VMDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPVDFTPPPNDPHGIQRE
DLILSLRAVLASTSRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLP
SLWASIRREVFQTASERVEAEGLAALHSLTACLSRSVLRADAEDLLDSFLSNILQDCRHH
LCEPDMKLVWPSAKLLQAAAGASARACDHITSNILPLLLEQFHKHSQSNQRRTILEMILG
FLKLQQKWSYEDKDERPLSAFKDQLCSLVFMALSDPSTQLQLVGIRALTVLGAQPDLLSS
EDLELAVGHLYRLSFLEEDSQSWVAALEASGALATLYPVAFSSHLVPKLAEELHVGESDL
ARGDGPTKPCRHLRCLQALSAVSTHPSIVKETLPLLLQHLCQMNKGNMVAGSNEVIAICQ
SLQQVAEKCQQDPESCWYFHQTAIPCLLALAVQASMPEKEPSVLRKVLLEDEVLVAMVSV
IGTATTHLNPELAAQSVTCIVPLFLDGNTSFLPENSFPSRFQPFHDGSVEQRRLVALLMA
FVCSLPREVEIPQLNQLMRELLELSCCHGCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQL
AMDTVEASLGSGPSRRQAFTLLLWVTKALVLRYHPLSSCLTTRLMGLLSDPELGPAAADG
FSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHSAPQDVKPNYLKGLSHVLN
RLPKPVLLPELPTLLSLLLEALSCSDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFL
NLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEAVAARG
EWFLLGSPGS
NT seq 3093 nt   +upstreamnt  +downstreamnt
atggccgccgccgccgctccccaggaggcggcggcgcctacgggccccctgtggggactc
gtgcaagacttcgtcatgggtcagcaggagggccccgctgaccaggtggctgcagatgtg
aaatccggcagctattcagtgttgcaagtggtggaagcccttggatcttctctggagaac
ccagaacccaggactcgggcacgagggatccagcttttgtcacaggtgctactccagtgt
cactctctgctcctggagaaggaagttgtacacctgatcctgttctatgagaatcgactg
aaggaccatcatcttgtgatcccatctgtcctgcaaggtttgagggcacttagcctgtgt
gtaaccctgcccccagggctggccgtctctgtgcttaaggccatcttccaagaggtacac
gtacaatccttgccacaggtggaccgacacacagtctatagcatcatcaccaacttcatg
caaatccgggaagaagagctaaagggcctaggagctgacttcacctttggcttcatccag
gtgatggatggggaaaaagatccccgtaatcttctggtggccttccgtatcgtccatgac
ctcatctccagggactatagcctgggaccctttgtggaggagttgtttgaagtgacttct
tgctatttccctgttgatttcacccctccacctaatgatccccatggaatccagagagag
gatctcatcctgagtcttcgagctgtgctggcttctacatcacgatttgctgagttcctg
ctgcccctgctaattgagaaggtggattctgagattctcagtgccaagctggattctctg
cagactctgaatgcttgctgtgctgtgtatggacagaaggaactgaaggacttcctcccc
agcctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtggaggca
gagggcctggcggccctccactccctgactgcgtgtttgtctcgctctgtgctgagggct
gatgctgaggacctccttgactccttccttagcaacattctacaggactgcaggcatcat
ctctgtgaaccggacatgaaattggtgtggcctagtgccaaactgttgcaggcagctgca
ggtgcatctgcgcgggcctgtgaccacatcaccagcaacattctgcctttactgctggaa
cagttccacaagcacagtcagagcaaccagaggcggacaatcctggaaatgatcctgggt
ttcttgaagctgcagcagaaatggagctatgaagacaaagatgaaaggcctctgagtgct
ttcaaggaccagctgtgttcactggtattcatggccctatcagaccccagcactcagctt
cagcttgttggcatccgtgcactcacagtcttgggtgcccagccagatctcctatcttct
gaggacttggagctggcagtgggtcacctgtacagactgagtttcctggaggaggattcc
cagagttgggtggcagcactggaagcatcaggagccctggccacactctaccctgtggcc
ttcagcagccacctagtacctaagcttgctgaggagctacacgtaggggagtcagacttg
gccagaggggatgggcccaccaagccctgccggcatctgcgctgtctgcaagctctgtca
gctgtttcaacacatcccagcattgtcaaggagacactgcctctgctgttgcagcatctc
tgccagatgaacaaaggaaatatggttgcaggatcaaatgaagttattgccatctgtcag
agcctccagcaggtggcagaaaaatgccagcaggaccctgagagctgctggtatttccac
cagacagctatcccttgcctgcttgccctggctgtgcaggcttccatgccagagaaggag
ccctctgtcctgagaaaagtgctgctggaggatgaggtgttggtcgctatggtgtctgtt
attggcactgccaccacccacctgaaccctgaattagctgcccagagtgttacctgcatt
gtacccctcttcttggatggcaacacctcctttctgcctgaaaacagctttccaagcaga
ttccagccattccacgatggctctgtggagcaaaggcggctggttgcactgcttatggcc
tttgtctgctccttgcctcgagaggtggaaatccctcagctgaaccaacttatgcgggag
ctgttggaattgagctgttgccacggctgccccttctcctccacagctgctgccaagtgt
tttgcaggactcctaaacaagcatcctgcagggcagcagctggacgaattcctccagctg
gctatggacacagtggaggcgagcctgggctctgggccctcgcgtagacaggccttcaca
ctgctgctgtgggtaacaaaggcgctagtgctcagataccatcctctcagctcctgcctt
acaacccggctcatgggcctcctgagtgatccagaactaggcccagcagcagccgatggc
ttttctctgctcatgtctgactgtactgatgtgttgactcgtgctggccacgccgaggtg
cggatcatgttccgccagcggttcttcacagacaacgtgcctgctttggtccagggcttc
cattctgctccccaagatgtgaagccaaactacctgaagggcctgtcccatgtccttaac
aggctgcccaagcctgtgctgttgccagagctgcccacacttctctccttgctgctggag
gccctgtcctgctctgactgtgtggtccaactctccacgctcagctgccttcagcctctc
ctgctggaagcaccccaggtcatgagtcttcatgttgataccctcgtcaccaagtttctg
aacctcagctccagcccttccatggctgtccggatcgcggctctgcagtgcatgcacgct
ctcactcgcctgcccaccccggtgctgctcccctacaaaccacaggtgatccgagcctta
gccaaacccttggatgataagaagagactggtgcgcaaggaggccgtagcagccagggga
gagtggtttctgctggggagccctggcagctga

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