Oryctolagus cuniculus (rabbit): 100347351
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Entry
100347351 CDS
T03373
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03008
Ribosome biogenesis in eukaryotes
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
ocu05014
Amyotrophic lateral sclerosis
ocu05164
Influenza A
ocu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100347351
03015 mRNA surveillance pathway
100347351
03008 Ribosome biogenesis in eukaryotes
100347351
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100347351
05168 Herpes simplex virus 1 infection
100347351
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100347351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100347351
03009 Ribosome biogenesis [BR:
ocu03009
]
100347351
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100347351
mRNA cycle factors
Stress granule specific factors
100347351
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100347351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
100347351
NCBI-ProteinID:
XP_002721042
Ensembl:
ENSOCUG00000009503
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MADEGKSYNEYDDRVSFPQRRKKGRGPFRWKYGESNRRSGRGGSGIRSSRLEEDDGDVAM
SDAQDGPRVRYTPYAARPNRRGDTWHGRERIHVTVRRDRAPLERGGAGTSQDGTSKNWFK
ITIPHGRKYDKSWLLNMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAINYKILD
RENKRISIFINSSTPPLTVQSELKPEQVEQLKVIMSKRYDGSQQALDLKGLRSDPDLLAQ
NIDVVLNRRSCMAAALRIIEENIPELLSLNLSDNRLFRLDDMSTLVQKAPNLKILNLSGN
ELKSERELDKIKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDVEAPTLLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIP
FIPQNPGRSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVV
DISAQTNTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASA
EEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaggggaagtcgtacaacgagtacgatgaccgtgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtatggtgagagtaaccgtcgctctgga
agaggtggttctggtatccggtcttcccggcttgaggaggatgatggagatgtagcaatg
agtgacgcccaggatggtccccgagtacgatacaccccctatgctgcccgacccaaccgc
cggggcgacacttggcatggtcgagagcgtattcatgttactgtgcggagagacagagct
cctttagagcgaggaggggccggcaccagccaggatgggacctccaaaaactggttcaag
attacgattcctcatggcagaaagtatgacaagtcatggctcctgaacatgattcagagc
aagtgcagtgtcccattcactcccattgagtttcactatgagaacacacgggctcagttt
tttgtcgaggatgccagtactgcctctgcgttgaaggcgatcaactataaaattctggat
agggagaacaagaggatatccatcttcatcaactcctctaccccacccctcactgtgcag
agtgaactgaagccagaacaagtagagcagctgaaggtgatcatgagcaaacgctatgac
ggctcccagcaagcactggatctcaagggcctgcgttcagacccagatttgttggcccag
aatatcgatgttgtactgaatcgtagaagctgtatggcagctgccttgcgaatcattgaa
gagaatattccagagctcttgtccttgaatttgagtgacaataggctgttcagactggat
gacatgtccaccttggtacagaaggcacccaacctaaagatcctaaacctctccgggaat
gaattgaagtctgagcgagaattagacaagataaaagggctgaagctagaagagctgtgg
cttgatggaaatcccttgtgtgacaccttccgagaccagtccacctacatcagcgccatt
cgtgaacgattccccaagttgttacgcctggatggccatgagttacccccaccaattgcc
tttgatgttgaagccccaacactgttgccaccctgcaagggaagctattttggaacagaa
aacctgaagagtctggtcctgcacttcttgcagcagtattatgcaatttatgactctgga
gaccgacaggggctcctggatgcctatcatgatggggcctgctgttccctgagcattcct
ttcatcccccagaaccccggccgaagcagcttggcagagtacttcaaggatagcagaaat
gtgaagaagcttaaagaccctacactgcggttccgattgctgaagcacacacgtctcaac
gtggttgccttcctcaatgagttgcccaaaactcagcatgacgtcaattcctttgtagta
gacataagcgcccagaccaatacattgctgtgtttttctgtcaacggtgtctttaaggaa
gtggatggaaagtcccgggattctttgcgagcctttactcggacattcattgccgttcct
gccagcaattcagggctgtgtattgtaaatgacgagctatttgtgcggaacgcgagcgct
gaagagatccagagagccttcgccatgccggcccccacaccttcctccagccccgtgccc
accctctccccggagcagcaggaaatgttgcaggcgttctctactcagtctggcatgaac
cttgagtggtctcagaagtgccttcaggacaacaactgggactacaccagatctgcccag
gccttcactcatctcaaggccaaaggtgagatcccagaagtggcattcatgaagtga
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integrated database retrieval system
