Oryctolagus cuniculus (rabbit): 100347453
Help
Entry
100347453 CDS
T03373
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03082
ATP-dependent chromatin remodeling
ocu04714
Thermogenesis
ocu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100347453
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100347453
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100347453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100347453
03036 Chromosome and associated proteins [BR:
ocu03036
]
100347453
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100347453
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100347453
Chromatin remodeling factors
BAF complex
100347453
PBAF complex
100347453
GBAF(ncBAF) complex
100347453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Htt_C-HEAT
DUF2009
Motif
Other DBs
NCBI-GeneID:
100347453
NCBI-ProteinID:
XP_051694082
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIGTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQLSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTAAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
SEEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDGDAGSSTPTTSTRSRDKDDES
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYY
ELIRKPVDFKKIKERIRSHKYRSLGDLEKDVLLLCQNAQTFNLEGSLIYEDSIVLQSVFT
SVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSR
GSRAKPVVSDDDSEEEQEEXXSGSGSEED
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggtgggactccgaggccaggcccttccccaggccca
gggccctcgcctggagccatgctgggccctagcccagggccctcgccaggctccgcacac
agcatgatggggcccagcccagggccgccttcggctggacaccccatcgggactcagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccgatggagtccatgcat
gagaagggcatgtcggacgacccgcgctacaaccagatgaaaggaatggggatgcggtcg
ggcggccacgcagggatggggcccccgcccagccccatggaccagcactcccaaggttat
ccctcacctctgggtggctccgagcacgcctccagcccggttccagccagtggcccgtcc
tcaggcccccagctgtcctctggaccaggaggagccccgctggatggtgctgacccccag
gctttggggcagcagaaccggggcccaactccgttcaaccagaaccagctgcaccaactg
cgggcccagatcatggcctacaagatgctggccagggggcagccgctccccgaccacctg
cagatggctgtgcaggggaagcggccgatgcccgggatgcagcagcagatgccgacacta
cctccaccctctgtgtccgccacaggccccgggcccggccctggccccggccccggcccc
ggcccgggaccagcacctccaaattacagcaggccccacggtatgggagggcccaacatg
ccccccccaggcccctcaggcgtgcctcctgggatgccagggcagccccccggagggccc
cccaagccctggcctgaaggacccatggcgaatgctgctgcccccacgagcacccctcag
aagctgatccccccgcagcccacgggccgcccctcacccgcgccccccgccgtcccgccc
gccgcctcgcccgtgatgccgccccagacgcagtcgccggggcagccggcgcagccggcc
cccatggtgccgctgcaccagaagcagagccgcatcacccccatccagaagcccaggggc
ctggaccccgtggagatcctgcaggagcgggagtacaggctgcaggctcgcatcgcacac
cgaatccaggaacttgaaaacctccccgggtccttggccggggatctgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagagacagctgcgccaggaggtg
gtggtgtgcatgcggagggacacagcgctggagacggcgctgaacgccaaggcctacaag
cgcagcaagcgccagtccctgcgcgaggcgcgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcggcgccagaagcaccaggagtacctcaacagcatcctg
cagcacgccaaggacttcaaggagtaccacagatccgtcacgggcaagatccagaagctc
accaaggcggtggccacgtaccacgccaacacggagcgggagcagaagaaggagaacgag
cggatcgagaaggagcgcatgcgcaggctcatggccgaggacgaggaggggtaccgcaag
ctcatcgaccagaaaaaggacaagcgcctggcctacctcctgcagcagacggacgagtac
gtggccaacctcacagagctggtgcgccagcacaaggccgcccaggtggccaaagagaag
aagaagaagaagaagaagaagaaggcagagaacgcagaggggcagacggcggccattggt
ccggatggcgagcctctggacgagaccagccagatgagcgacctcccggtcaaggtgatc
cacgtggagagcgggaagatcctcacgggcaccgacgcccccaaggccgggcagctggaa
gcctggctcgagatgaacccagggtacgaagtcgctccgaggtctgacagtgaggaaagc
tcagaggaggaggaggaggaggaggaggaggaggagcagccgcagccggctcagcctccc
accctgcccgtggaggagaagaagaagattccggacccagacagcgatgacgtctctgag
gtggacgcccggcacatcatcgagaacgccaagcaggacgtcgacgacgagtacggcgtg
tcccaggccctcgcccgcggcctgcagtcctactatgctgtggcccacgctgtcacagag
agggtggacaagcagtcggcgctcatggtcaacggcgtcctcaagcagtaccagatcaag
ggcctggagtggctggtgtcgctgtacaacaacaacctgaacggcatcctggccgacgag
atggggctgggcaagaccatccagaccatcgcgctcatcacgtacctcatggagcacaag
cgcatcaacgggcccttcctcatcatcgtgcctctctcgactctgtcaaactgggcgtac
gaatttgacaagtgggctccctccgtggtgaaggtgtcctacaagggctctccggcggcg
aggcgagctttcgtcccccagctccgaagcggcaagttcaatgtcctgctgacgacgtat
gagtacatcatcaaggacaagcacatcctcgccaagatccgctggaagtacatgatcgtg
gacgaaggccaccgcatgaagaaccaccactgcaagctgacgcaggtgctgaacacgcac
tacgtggcgccgcggcggctgctgctcacgggcacgccgctgcagaacaagctgcccgag
ctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgcccttcgccatgacgggcgagaaggtggacctgaacgaggaggag
accatcctcatcatccgccgcctgcacaaggtgctgcggcccttcctgctgcggcggctc
aagaaggaggtggaggcccagctgcccgagaaggtggagtacgtcatcaagtgcgacatg
tctgccctgcagcgggtcctctaccgtcacatgcaggccaagggcgtgctgctgaccgac
ggctccgagaaggacaagaagggcaaaggcggcaccaagaccctgatgaacaccatcatg
cagctgaggaagatctgcaaccacccgtacatgttccagcacatcgaggaatccttttct
gagcacttggggtttaccggcggcatcgtccaagggctggacctgtaccgcgcctcgggg
aagttcgagctgctggacaggatcctcccgaagctgcgcgccaccagccataaggtgctg
ctcttctgccagatgacgtccctcatgaccatcatggaggactacttcgcctaccgcggc
ttcaagtacctcaggctcgacggaaccaccaaggcggaggaccggggcatgctgctgaag
accttcaacgagcccggctccgagtacttcatcttcctgctcagcacccgcgccgggggc
ctggggctcaacctgcagtcggcggacactgtgatcatcttcgacagcgactggaacccc
caccaggacctgcaagcgcaggaccgggcgcaccgcatcgggcagcagaacgaggtgcgc
gtgctgcgcctctgcacggtgaacagcgtggaggagaagatcctggccgcggccaagtac
aagctcaacgtggaccagaaggtgatccaggccggcatgtttgaccagaagtcctcgagc
cacgagcgccgcgccttcctgcaggccatcctggagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaggtgcccgacgacgag
acggtcaaccagatgatcgcccggcacgaggaggagtttgacctgttcatgcgcatggac
ctggaccgcaggcgggaggaagcccgcaaccccaagcggaagccgcggctcatggaggag
gacgagctgccgtcctggatcatcaaggacgacgccgaggtggagcggctgacctgcgag
gaggaggaggagaagatgttcggccgcggctcccgccaccgcaaggaggtggactacagc
gactctctcaccgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaagtcgtcgcgcaagcgcaagcgggacggc
gacgccggctcctccacgccgaccaccagcacccgcagccgcgacaaggacgacgagagc
aagaagcagaagaagcgcgggcggccgccggccgagaagctgtcccccaacccgcccaac
ctcaccaagaagatgaagaagatcgtggacgctgtgatcaagtacaaggacagcagtgga
cggcagctcagcgaggtcttcatccagctgccctcccggaaggagctgcccgagtactac
gagctcatccgcaagcccgtggacttcaagaagataaaggagcgcatccgcagccacaag
taccgcagcctgggcgacctggagaaggacgtgctgttgctctgccagaacgcgcagacc
ttcaacctcgagggctccctgatctacgaggactccatcgtcctgcagtccgtcttcacg
agcgtgcggcagaaaatcgagaaggaagacgacagtgagggcgaggagagcgaggaggag
gaggagggcgaggaggaaggctccgagtccgagtcccgctcggtcaaggtgaagatcaag
ctcggccgcaaggagaaggcacaggaccggctgaagggggggcggcggcgccccagccgc
gggtcccgggccaagccggtcgtcagcgacgacgacagtgaggaggagcaggaggaggnn
ngctcgggaagtggcagcgaggaggactga
DBGET
integrated database retrieval system
