Oryctolagus cuniculus (rabbit): 100347525
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Entry
100347525 CDS
T03373
Symbol
DHX58
Name
(RefSeq) DExH-box helicase 58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
3.6.4.13
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100347525 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ocu04054
]
100347525 (DHX58)
Enzymes [BR:
ocu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
100347525 (DHX58)
Pattern recognition receptors [BR:
ocu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100347525 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
Motif
Other DBs
NCBI-GeneID:
100347525
NCBI-ProteinID:
XP_002719437
Ensembl:
ENSOCUG00000013278
LinkDB
All DBs
Position
19:complement(42938166..42946286)
Genome browser
AA seq
678 aa
AA seq
DB search
MELRPYQWEVIVPALEGKNIIIWLPTGTGKTRAAAYVAKRHLETVPGAKVVVLVNRVHLV
TQHSEEFGRMLDGHWTMTTLRGDMGPRAGFGHLARGHDLLICTAELLQMALTSTEEEEHV
ELTAFTLLVVDECHHTHKDTVYNVILSRYLELKVHRTQPLPQVLGLTASPGTGGASKLDG
AIDHILQLCANLDTWRIMSPERYRSQLLQLNQKRCKQYDLCHRRSQDPFGDLVRKIMDQI
HDHMEMEELSRDFGTQTYEQQVVELSQAAAKAGLQEQRVHALHLRRYNDALLIHDTVRAV
DALDTLQDFYDRERTTKARILHAERWLLALFDEHKNTLARLATQSPENPKLEMLENILRT
QFRSPDSPRGIIFTRTRQSARSLLLWVQQQPGLQTVDIRPQMLIGAGSSSQSTHMTQRDQ
EEVIRRFRAGMLNLLVATSVVEEGMDIPHCNVVVRYGLLTNEISMVQARGRARADQSVYS
FVATEGSRELRRELTNEMLEALMEQAVGAVQKMDQAEYQAKIRQLQLAALVQRAARADQK
EQVRQQFPAEHVRLLCVNCMEAVGHGSDLRKVEGAHHVNVNPNFSIYYAVSRDPVPINRE
FKDWKPGGTIRCRNCGESWGLQMIYKSVKLPVLKVRSMLLETPRGRIQAKKWSRVPFPVA
DFDFLQHCTQSLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctacgcccctaccagtgggaggtgatcgtgcctgccctggaaggcaagaatatc
atcatctggctgcccacgggcactgggaagacccgggcggccgcttacgtggccaagcgg
cacctggagaccgtgcctggagccaaggtggtggtgctggtcaacagggtgcacctggtg
acccagcacagcgaggagttcggccgcatgctggatggacactggaccatgacaaccctg
aggggggacatgggcccccgcgctggtttcggccacctggcccggggccacgacctgctc
atctgcacagctgagctgctgcagatggctctgaccagcactgaggaggaggagcacgtg
gagctcacagccttcaccctgctcgtggtggacgagtgtcaccacacgcacaaggacacc
gtctacaatgtcatcctcagccgctacctagagctcaaagtgcacaggacacagcccctc
ccccaggtgctgggactcaccgcctccccgggcactggcggggcctccaagctcgatgga
gccatcgaccacatcctgcagctctgtgccaacttggacacgtggcgcatcatgtcacca
gagcgctaccgctcccagctgctgcagctcaaccagaaacgctgcaagcagtatgacctc
tgccaccgccgcagccaggacccttttggggacttggtgaggaagatcatggaccaaatc
cacgaccacatggagatggaggagctgagccgggacttcggcacgcagacgtacgagcag
caggtggtggagctgagccaggcagcggcgaaggccgggctccaggagcagcgggtgcat
gcgcttcaccttcggcgctacaacgacgcgctgctcatccacgacacggtccgcgccgtg
gacgctctggacacgctgcaggatttctacgacagggagcgcaccactaaagcccggatc
ctgcatgccgagcgctggctgctggccctcttcgatgagcacaagaacacgctggcccgc
ttggcgacacagagccccgagaaccccaagctggagatgctggagaacatcctgcggaca
cagttcaggagccccgacagcccccggggcatcatcttcacccgcacccgccagagcgcg
cgctccctgctgctctgggttcagcagcagcccggcctgcagacagtggacatcaggccc
cagatgctgattggggcggggagcagcagccagagcacccacatgacccagagggaccag
gaagaggtgatccggaggttccgtgctggcatgctgaacctgctggtggccacgagtgtg
gtggaggaggggatggacattcctcactgcaatgtggtggtgcgctacgggctcctgacc
aacgagatctccatggtccaggccaggggccgagcccgggcagatcagagtgtgtactca
tttgtggcaacggagggcagccgggagctacggcgggagctgaccaatgagatgctggag
gcgctgatggagcaggcagtgggtgctgtgcagaagatggaccaggctgagtatcaggcc
aagatccgacagctgcagctggcagccctggtgcagcgcgccgcccgggccgaccagaag
gagcaggtgcggcagcaattcccggccgagcacgtgcggctcctgtgtgtaaactgcatg
gaggccgtgggccacgggagcgacctgcggaaggtggagggtgcccaccacgtcaacgtg
aaccccaacttctcgatctattatgctgtctcccgggatcccgtgcccatcaacagagag
ttcaaggactggaagccggggggtaccatccgctgcaggaactgtggggagagctggggc
ctgcagatgatctacaaatccgtgaagctgccggtgctcaaagtccgaagcatgctgctc
gagacccctcgagggcgcatccaggccaagaagtggtcccgcgtgcccttcccggtggcg
gacttcgacttcctgcagcactgcacccagagcctgtccgacctctcgctggactga
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