KEGG   Oryctolagus cuniculus (rabbit): 100347525
Entry
100347525         CDS       T03373                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX58
  KO
K12649  ATP-dependent RNA helicase DHX58 [EC:5.6.2.6]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    100347525
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ocu04054]
    100347525
Enzymes [BR:ocu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100347525
Pattern recognition receptors [BR:ocu04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   100347525
SSDB
Motif
Pfam: RIG-I_C-RD RIG-I_C ResIII DEAD Helicase_C SWI2_SNF2 AAA_19 CATASP PUS7L_N
Other DBs
NCBI-GeneID: 100347525
NCBI-ProteinID: XP_002719437
Ensembl: ENSOCUG00000013278
LinkDB
Position
19:complement(40467410..40475803)
AA seq 678 aa
MELRPYQWEVIVPALEGKNIIIWLPTGTGKTRAAAYVAKRHLETVPGAKVVVLVNRVHLV
TQHSEEFGRMLDGHWTMTTLRGDMGPRAGFGHLARGHDLLICTAELLQMALTSTEEEEHV
ELTAFTLLVVDECHHTHKDTVYNVILSRYLELKVHRTQPLPQVLGLTASPGTGGASKLDG
AIDHILQLCANLDTWRIMSPERYRSQLLQLNQKRCKQYDLCHRRSQDPFGDLVRKIMDQI
HDHMEMEELSRDFGTQTYEQQVVELSQAAAKAGLQEQRVHALHLRRYNDALLIHDTVRAV
DALDTLQDFYDRERTTKARILHAERWLLALFDEHKNTLARLATQSPENPKLEMLENILRT
QFRSPDSPRGIIFTRTRQSARSLLLWVQQQPGLQTVDIRPQMLIGAGSSSQSTHMTQRDQ
EEVIRRFRAGMLNLLVATSVVEEGMDIPHCNVVVRYGLLTNEISMVQARGRARADQSVYS
FVATEGSRELRRELTNEMLEALMEQAVGAVQKMDQAEYQAKIRQLQLAALVQRAARADQK
EQVRQQFPAEHVRLLCVNCMEAVGHGSDLRKVEGAHHVNVNPNFSIYYAVSRDPVPINRE
FKDWKPGGTISCRNCGESWGLQMIYKSVKLPVLKVRSMLLETPRGRIQAKKWSRVPFPVA
DFDFLQHCTQSLSDLSLD
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggagctacgcccctaccagtgggaggtgatcgtgcctgccctggaaggcaagaatatc
atcatctggctgcccacgggcactgggaagacccgggcggccgcttacgtggccaagcgg
cacctggagaccgtgcctggagccaaggtggtggtgctggtcaacagggtgcacctggtg
acccagcacagcgaggagttcggccgcatgctggatggacactggaccatgacaaccctg
aggggggacatgggcccccgcgctggtttcggccacctggcccggggccacgacctgctc
atctgcacagctgagctgctgcagatggctctgaccagcactgaggaggaggagcacgtg
gagctcacagccttcaccctgctcgtggtggacgagtgtcaccacacgcacaaggacacc
gtctacaatgtcatcctcagccgctacctagagctcaaagtgcacaggacacagcccctc
ccccaggtgctgggactcaccgcctccccgggcactggcggggcctccaagctcgatgga
gccatcgaccacatcctgcagctctgtgccaacttggacacgtggcgcatcatgtcacca
gagcgctaccgctcccagctgctgcagctcaaccagaaacgctgcaagcagtatgacctc
tgccaccgccgcagccaggacccttttggggacttggtgaggaagatcatggaccaaatc
cacgaccacatggagatggaggagctgagccgggacttcggcacgcagacgtacgagcag
caggtggtggagctgagccaggcagcggcgaaggccgggctccaggagcagcgggtgcat
gcgcttcaccttcggcgctacaacgacgcgctgctcatccacgacacggtccgcgccgtg
gacgccctggacacgctgcaggatttctacgacagggagcgcaccactaaagcccggatc
ctgcatgccgagcgctggctgctggccctcttcgatgagcacaagaacacgctggcccgc
ttggcgacacagagccccgagaaccccaagctggagatgctggagaacatcctgcggaca
cagttcaggagccccgacagcccccggggcatcatcttcacccgcacccgccagagcgcg
cgctccctgctgctctgggttcagcagcagcccggcctgcagacagtggacatcaggccc
cagatgctgattggggcggggagcagcagccagagcacccacatgacccagagggaccag
gaagaggtgatccggaggttccgtgctggcatgctgaacctgctggtggccacgagtgtg
gtggaggaggggatggacattcctcactgcaatgtggtggtgcgctacgggctcctgacc
aacgagatctccatggtccaggccaggggccgagcccgggcagatcagagtgtgtactca
tttgtggcaacggagggcagccgggagctacggcgggagctgaccaatgagatgctggag
gcgctgatggagcaggcagtgggtgctgtgcagaagatggaccaggctgagtatcaggcc
aagatccgacagctgcagctggcagccctggtgcagcgcgccgcccgggccgaccagaag
gagcaggtgcggcagcaattcccggccgagcacgtgcggctcctgtgtgtaaactgcatg
gaggccgtgggccacgggagcgacctgcggaaggtggagggtgcccaccacgtcaacgtg
aaccccaacttctcgatctattatgctgtctcccgggatcccgtgcccatcaacagagag
ttcaaggactggaagccggggggtaccatcagctgcaggaactgtggggagagctggggc
ctgcagatgatctacaaatccgtgaagctgccggtgctcaaagtccgaagcatgctgctc
gagacccctcgagggcgcatccaggccaagaagtggtcccgcgtgcccttcccggtggcg
gacttcgacttcctgcagcactgcacccagagcctgtccgacctctcgctggactga

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