KEGG   Oryctolagus cuniculus (rabbit): 100347609
Entry
100347609         CDS       T03373                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03020  RNA polymerase
ocu03420  Nucleotide excision repair
ocu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100347609
  09124 Replication and repair
   03420 Nucleotide excision repair
    100347609
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100347609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100347609
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100347609
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100347609
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100347609
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100347609
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100347609
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 100347609
NCBI-ProteinID: XP_002721043
Ensembl: ENSOCUG00000009485
UniProt: G1SXB1
LinkDB
Position
Unknown
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttctaccacatctccctggagcacgagatcctgctgcacccgcgctactttggccct
aacttgctcaacaccgtgaagcagaagctcttcaccgaggtggaggggacttgcactggc
aagtatggcttcgtcattgctgtcaccaccatagacaacatcggcgcaggagtgattcag
ccaggccgaggctttgtgctttatcctgttaagtacaaggccattgttttccggcccttt
aaaggtgaggtcgtggatgcagttgtcactcaggtcaacaaggttggactcttcacagaa
attgggccaatgtcttgcttcatctctcgacactctatcccatcagagatggagtttgat
cccaattccaacccaccatgctacaagacaatggatgaggacattgtgattcagcaggat
gatgagatccgcctgaagattgtggggacccgagtggacaagaacgacatttttgccatt
ggctccctgatggacgattacctggggctagtgagctga

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