| Entry |
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| Name |
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
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| KO |
| K12821 | pre-mRNA-processing factor 40 |
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| Organism |
ocu Oryctolagus cuniculus (rabbit)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ocu00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100347815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:ocu03041]
100347815
Spliceosome [BR:ocu03041]
Complex A
U1 snRNP components
U1 related factors
100347815
Complex B
100347815
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:81815906..81866862
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| AA seq |
972 aa
MCSGSGRRPSSLSPTMRPGTGAERGGLMVSEMENQPPSRGPGDGEPRLSGSNLCSSSWVS
ADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMS
SVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTI
VAGGLITKSNLHAMIKAEESSKQEECTTTSAAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANASASTSTSNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
SAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLK
EKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKE
SFQRFLENHDKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQ
LRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHI
RALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIR
FTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISS
TKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDA
VWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKR
SRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDS
AESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKR
RRTLLEQLDDDQ |
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| NT seq |
2919 nt +upstreamnt +downstreamnt
atgtgtagcggcagtggccgccggccgagcagtctgagcccgacgatgaggccggggacg
ggagccgagcgtggaggcctcatggtgagtgaaatggagaaccaacctccctcgcggggt
cctggggacggggagccgagattgtccggctccaacctctgctccagctcttgggtttcc
gctgacggcttcctgaggagacggccctcgatggggcaccctggcatgcattatgcccca
atgggaatgcaccctatgggtcagagagcaaatatgcctcctgtacctcatggaatgatg
ccacaaatgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtct
tcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgcttta
ccgccaggggtaaatagtatggatgtggcagcaggtacagcatctggcgcaaaatcaatg
tggactgaacataaatcacctgatggaaggacttactactataatactgaaacaaaacag
tctacctgggagaagccagatgatcttaaaacacctgctgagcaactgttatctaaatgc
ccttggaaggagtacaaatctgattctggaaagccttattattacaattctcaaacaaaa
gaatcccgctgggccaagcctaaagagcttgaggatcttgaaggataccagaataccatt
gttgctggaggtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagagagc
agtaagcaagaagagtgcaccacaacatcagcagccccggttcctacaacagaaattccg
actacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgcagcagcagcc
gcagcagcagcagctgctgctgcagccaatgccagtgcttccacttctacttctaatact
gtgggtggaactgttccagttgttcctgagcctgaagttacttccattgttgctactgtt
gtagataatgaaaatactgtaactatttcaactgaggaacaagcacaacttactagtacc
tctgctattcaggatcagagtgttgaagtatccagtaatactggagaagaaacatctaaa
caggaaactgtagctgattttactcccaaaaaagaagaggaggaaagccagccagcaaaa
aaaacatatacttggaatacaaaggaggaggcaaagcaagcatttaaagaattattgaag
gaaaagcgggtaccatccaatgcttcatgggaacaagctatgaaaatgatcattaatgat
ccacgatacagtgctttagcaaaattgagtgaaaaaaagcaggcttttaatgcctataaa
gtccagacagaaaaagaggaaaaagaagaagcaagatcgaaatacaaagaggctaaggaa
tcctttcagcgtttccttgaaaatcatgataaaatgacttccacaaccagatacaaaaaa
gcagagcaaatgtttggagagatggaagtctggaatgcaatatctgaacgtgaccgtctt
gaaatctatgaagatgttttgttctttctttcaaaaaaagaaaaggaacaagcaaagcag
ttacgaaagaggaattgggaagccttaaaaaacatacttgacaacatggctaatgtaaca
tattctactacttggtctgaagcccagcagtatctgatggataatccaacgtttgcagaa
gatgaggagttacagaatatggacaaagaagatgcattaatttgctttgaagaacacatt
cgggctttagaaaaggaagaagaagaagaaaaacagaagagtttactaagagaaagaaga
agacagcgtaaaaatagggaatcatttcagatatttttagatgaattgcatgaacatgga
caactgcattctatgtcatcttggatggaattatatcccactattagttctgacattaga
ttcaccaatatgcttggtcagcctggatcaactgcacttgatcttttcaagttttatgtt
gaggatcttaaagcacgttatcatgatgagaaaaagataataaaagacattctaaaggat
aaaggatttgtagttgaagtgaatactacttttgaagattttgtggcaataattagttca
actaaaagatcaactacgttagatgcagggaatatcaagttggctttcaatagtttacta
gaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggcccggaagatgaaacgt
aaagaatctgctttcaagagtatgttgaaacaagctgcgcctccaatagagctggatgct
gtctgggaagatatccgggagagatttgtaaaggagccagcatttgaggatataaccctg
gaatctgaaagaaaaagaatatttaaagactttatgcatgtgcttgagcatgaatgtcag
catcaccactcaaagaacaagaaacattctaagaaatctaaaaaacatcataggaaacgt
tcccgctctcgatcagggtcagattcagatgatgatgacagccattcaaagaaaaaaaga
cagcgatcagagtcccgttcagcttcagaacattcttctagtgctgagtctgagagaagt
tataagaagtcaaaaaagcacaagaagaaaagcaagaagaggagacataaatctgactct
gcagaatcagatgctgagcgtgagaaggataaaaaggaaaaagaccgggaaagtgaaaaa
gaccgaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaagactggaaag
gattctggaaattgggatacttctggcagtgaattgagcgaaggggaattagaaaagcgc
agaagaacccttttggagcaactggatgatgatcaataa |
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