KEGG   Oryctolagus cuniculus (rabbit): 100347889
Entry
100347889         CDS       T03373                                 
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03250  Viral life cycle - HIV-1
ocu03272  Virion - Hepatitis viruses
ocu04144  Endocytosis
ocu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100347889
   03272 Virion - Hepatitis viruses
    100347889
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100347889
  09143 Cell growth and death
   04217 Necroptosis
    100347889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100347889
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocu04147]
    100347889
Membrane trafficking [BR:ocu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    100347889
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100347889
  Exosomal proteins of other body fluids (saliva and urine)
   100347889
  Exosomal proteins of colorectal cancer cells
   100347889
SSDB
Motif
Pfam: Snf7 SYF2 Decapeptide TPR_Epg5_C Phage_TAC_15
Other DBs
NCBI-GeneID: 100347889
NCBI-ProteinID: XP_002710845
Ensembl: ENSOCUG00000024028
UniProt: G1U2E3
LinkDB
Position
4:complement(13509653..13564370)
AA seq 224 aa
MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK
NKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAH
DNMDIDKVDELMQDIADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNL
LEISGPETVPLPNVPSIALPSKPTKKKEEEDDDMKELENWAGSM
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtcggtgtttgggaaactgttcggggctggagggggtaaggccggcaagggcggcccg
accccccaggaggccatccagcggctgcgggacacggaggagatgctaagcaagaagcag
gagttcctggagaagaaaatcgagcaggagctgacggctgccaagaagcacggcaccaaa
aacaagcgcgcggccctccaggctctgaagcgcaagaagaggtatgagaagcagctggca
cagatcgacggtacgctgtccaccatcgagttccagcgggaggccctggagaatgccaac
accaacaccgaggtgctcaagaacatgggctacgccgccaaggccatgaaggcagcccac
gacaacatggacatcgataaagtcgatgagctaatgcaggacattgctgaccagcaagaa
cttgcagaggagatttccacagctatttccaaacctgtaggctttggagaagagtttgac
gaggatgaactcatggctgaattggaagaactagaacaggaggagctagacaagaatttg
ctggaaatcagtggacccgaaacagtccctctaccaaatgttccttctatagccctaccg
tcaaaacccaccaagaagaaggaagaggaagacgacgacatgaaggaattggagaactgg
gccggatccatgtaa

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