KEGG   Oryctolagus cuniculus (rabbit): 100348242
Entry
100348242         CDS       T03373                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100348242
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100348242
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    100348242
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100348242
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA_8 CUE Comm Methyltransf_32
Other DBs
NCBI-GeneID: 100348242
NCBI-ProteinID: XP_051713184
Ensembl: ENSOCUG00000023943
LinkDB
Position
13:complement(38562538..38619242)
AA seq 1139 aa
MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDI
TGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEDG
KENRDRDRDYSRRRGGPPRRGRGASRGRECMHGALSKPTVVRGQENGLDGTKSGGPSGRG
TERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNSSGNTWNNTGHFE
PDDGTRLDFIGVEGSNYPRKFETAPGAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPL
PTENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPAS
GNTFSHHSMVSMLGKGFGDVGEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGSTTTSS
WDMGSTTQSPSLVQYDLKNPNDSAVHSPFTKRQAFTPSSTMMEVFLQEKPPAVAASTAAP
PPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSA
DISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQES
GYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLSQAKNGFSSVQATQL
QTTQSVEGATGSAVKSDSPSTSTIPPLNETVSAASLLTTTNQHSSSLGGLSHSEEIPNTT
TTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPV
VSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSVSLLGKAPPNLPPGVPPLLPNPYIM
APGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKF
GRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQ
YGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSV
YSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQ
ILHHHLQQDGQLPYLQMILCCQRQQEEQTGSGQRSQTSSIPQKPQTNKSAYNSYSWGAN
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgatgacgtcggtgggcactaaccgagcccggggaaactgggaacaacctcaaaaccaa
aaccagacacagcacaagcagcggccacaggctactgcagaacaaattcgacttgcacag
atgatttcggaccataatgatgctgactttgaggaaaaggtgaaacaattgattgatatc
acaggcaagaaccaggatgaatgtgtgatcgctttacatgactgcaatggagacgtcaac
agagccatcaatgttctgctagaaggaaacccagacacgcattcctgggagatggtcggg
aagaagaagggagtctcaggacagaaggatggtggccagacggaatccaatgaggacggc
aaagaaaatcgggatcgtgacagagactatagtcggcgacgtggcgggccaccaagacgg
ggaagaggtgccagccgtggacgagagtgtatgcatggggctttatcaaaaccaactgtg
gttcgaggtcaggaaaatggattggatggcaccaagagtggagggccgtctggaagaggc
acagaaagaggcagaaggggtcgtggccgaggcagaggtggctctggtaggcggggagga
aggttttctgctcaaggaatgggaacctttaacccagctgattatgcagagccagccaat
accgatgataattatggcaatagtagcggcaatacgtggaacaacactggccactttgaa
ccagatgatgggacgagacttgatttcattggggttgaggggtcaaattatccccgaaaa
tttgagactgctcctggtgcatggaggactgcaacagaggagtggggaactgaggattgg
aatgaagatctttctgagaccaagatcttcactgcctctaatgtgtcttcagtgcctctg
cctacggagaatgtgacaatcactgctggtcagagaattgaccttgctgttctgttggga
aagacaccatcttccatggagaatgattcatcaaatctggatccatctcaggctccatct
ctggctcagcctctggtgttcagtaattctaagcagagtgccatatcacagcctgcttca
gggaacacgttttctcatcacagtatggtgagcatgttagggaaaggatttggtgatgtt
ggcgaagctaaaggtggcagcaccacaggatcccagtttttggagcaattcaagactgct
caggccctggctcaattggcagctcaacattctcaatctggaagtaccaccacctcctct
tgggacatgggctcaacaacacaatccccatcgctggtgcagtatgatttgaagaacccc
aatgattcagcagtgcacagcccgtttacaaagcgccaggccttcaccccatcttcaacc
atgatggaggtgttccttcaggaaaagccacctgcagtggctgcctcgacagctgcacct
ccacccccctcttctcctctgccaagcaaatccacctcggctccacagatgtctcctggg
tcttcagacaaccaatcatccagccctcagccggctcagcagaaactgaaacagcagaag
aaaaaagcctccttgacttctaagattcctgctctggctgtggagatgcctggctcagca
gatatctcagggctaaatctgcagtttggggcattgcagtttgggtcagagcctgtcctt
tctgattatgagtccacccccaccacgagcgcctcttcaagccaggctccgagtagccta
tataccagcacggccagtgaatcttcatctacaatttcatctaaccagagtcaggagtct
ggttatcagagcggcccaattcagtcgacaacctatacctcccaaaataatgctcagggc
cctctatatgaacagagatccacacagactcggcggtaccctagctccatctcttcatca
ccccaaaaggacctgtctcaggcaaagaatggcttcagttcggtgcaggccacgcagtta
cagactacgcaatctgttgaaggtgctacaggctctgcagtgaaatctgattcaccttcc
acttctaccatcccccctctcaatgaaacggtatctgcagcttccttactgacgacaacc
aatcagcactcgtcctccttgggtggcttgagccatagtgaggagattccaaataccacc
accacacaacacagcagcacgttatctacacagcagaataccctttcctcatcaacatct
tctggacggacttcaacatccactcttttgcacacaagtgtggagagtgaggcgaatctc
cattcttcctccagcactttttccaccacatccagcacagtctctgcacctccccctgtg
gtcagtgtctcctctagtctgaacagtggcagtagcctgggcctcagcttaggcagcaac
tccaccgtcacagcctccacgcgaagctcagttgctacaacttcagtttctcttttagga
aaagctcctcccaacctccctcctggggtcccgccgttgttgcctaatccatatatcatg
gctccagggctgttacatgcctacccgccacaggtatatggttatgatgatttgcagatg
cttcagacaagatttccattggattactacagcatcccatttcctacacccaccactcca
ctgactgggagggatggtagcctggccagcaacccttattctggtgacctcacaaagttc
ggccgtggggatgcctcctcccctgccccggccaccaccttggcccagccccaacagaac
cagacgcagactcaccacaccacgcagcagacattcctgaacccggcgctgcctcctggc
tacagttacaccagcctgccatactacacaggggtcccgggcctccccagcaccttccag
tatgggcctgctgtgttccctgtggctcctacctcttccaagcagcatggtgtgaacgtc
agtgtgaatgcatcggccacccctttccaacagccgagcggatatgggtctcatggatac
aacactggtgtatcagtcacctccagtaacacgggcgtgccagatatctcgggttctgtg
tactccaaaacccagcagtcttttgagaaacaaggttttcattccggtactcctgctgcc
tccttcaacttgccttcagccctaggaagtggggggcccatcaatccggccacagctgct
gcctacccacctgccccctttatgcacattctgaccccccatcagcagccgcactcccag
atccttcaccatcacctgcagcaggatggccagctaccatatttgcagatgattctctgt
tgccagcgccagcaggaggagcagacgggcagcgggcaacgtagccagaccagctccatc
ccgcagaagccccagaccaacaagtctgcctacaacagctacagctggggggccaactga

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