Oryctolagus cuniculus (rabbit): 100348283
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Entry
100348283 CDS
T03373
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocu01001
]
100348283
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100348283
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100348283
Protein kinases [BR:
ocu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100348283
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100348283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
100348283
NCBI-ProteinID:
XP_051691605
Ensembl:
ENSOCUG00000007274
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MEVAVEKAAAAAPAAGGGENEAESRQGPDSERGGEAARLNLLDTCAVCRQNIQSRAPKLL
PCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPVSGASPFATQVGVIRCPVCSQECAERH
IIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECVEWLCKTCIRAHQRVKFTK
DHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDKLTCRDCQLLEHKEHRYQF
IEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQIQNRIIEVNQNQKQVEQDIKVAIFTLMV
EINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVMHFSKWAVSSGSSTALLYS
KRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINLGSLVIEDKESQPQMPKQN
PVMEQNSQPSGGLSSNQLSKFPTQISLAQLRLQHMQQQVMAQRQQVQRRPAPVGLPNPRM
QGPGQQGPSQQPSISHQQPPPRLINFQNHSPKPNGPVLPPHPPQLRYPSSQNMPRQALKP
NPLQMAFLAQQAIKQWQISSGQGAPSTASSTSSTPSSPTITSAAGYDGKAFGSPMIDLSS
PVGGSYNLPSLPDIDCSSTIMLENIGRKDTSVEHGQPRPPSNRTVQSPNSSVPSPGLAGP
VTMTSVHPPIRSPSASSIGSRGSSGSSSKPAGADSTHKVPVVMLEPIRIKQENSGPPENY
DFPVVIVKQESDEESRPQNTSYPRSILTSLLLHSGQSSASEETVPRSDAPDSTGDQPGLQ
QESSSNEKSDWLDASQKSPLHVGETRKEDDPNEDWCAVCQNGGELLCCDKCPKVFHLSCH
VPTLTNFPSGEWICTFCRDLSKPEVEYDCDARSHSSEKRKADGLVKLTPVDKRKCERLLL
FLYCHEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYPMYTKPEDFVADFRLIF
QNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKVEFRNESEDNKFSDDSDDDFV
QPRKKRLKSIEERQMLK
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtggagaaggcggcggcggccgcgccggcggccggcggcggggagaac
gaggccgagagccggcagggcccggactcggagcgcggcggcgaggcggcccggctcaac
ctgttggacacttgcgccgtgtgccgccagaacatccagagccgggcgcccaagctgctg
ccctgcctgcactcgttctgccagcgctgcctgccggcgccgcagcgctacctcatgctg
cccgcgcccatgctgggctcggccgagaccccgccgcccgtcagcggcgcgtcgccgttc
gccacgcaagttggagttatccgatgcccagtttgcagccaggaatgtgctgagagacat
atcatagacaattttttcgtgaaggacactactgaggtccccagcagcacggtcgaaaag
tctaatcaggtgtgtaccagctgtgaggacaatgcggaagctaatggattttgtgtagag
tgtgttgaatggctgtgcaaaacatgtataagagctcatcagagggtgaagttcacgaaa
gaccacactgtcagacagaaggaggaagtatctccagaggcagttggtgtgaccagtcag
cggccagtgttttgtccttttcataaaaaggagcagttgaagctttactgtgagacatgt
gacaagctgacatgtcgggactgccagctgttagaacataaagagcatagataccaattt
atagaagaagcttttcagaaccagaaagtgataatagacacattaatcaccaaactgatg
gaaaagacaaaatatataaaatttacaggaaatcagatccaaaacagaatcatcgaagtg
aatcaaaaccagaagcaagtggaacaggacatcaaggttgccatatttacactgatggta
gaaatcaacaagaaagggaaagcgctactgcatcagctggagagccttgcaaaggaccat
cgtatgaaacttatgcaacagcaacaggaggtggctggactttccaaacagttggaacac
gtcatgcatttttctaaatgggcagtttccagtggcagcagtacagcattactgtatagc
aagcgactgattacataccggttacggcacctccttcgtgcaaggtgtgatgcttcccca
gtgaccaacaacaccatccagtttcactgtgatcccagtttctgggctcaaaatattatc
aacttaggttctttagtaatcgaggataaagagagccagcctcaaatgcctaaacagaat
cctgtcatggaacagaattcacagccatcaggtggtttatcttcaaaccagttatccaag
ttcccaacacagatcagcctagctcaattacgactccagcatatgcagcaacaggtaatg
gctcagaggcaacaggtgcaacggaggccagcacctgtgggtttaccaaaccctagaatg
caggggcccggccagcaggggcccagccagcagccttccatctctcatcagcagccccct
ccacgtttgataaattttcagaatcatagccctaaaccaaatggaccagttcttcctcct
catcctccacagctgagatacccttcgagccagaatatgcccagacaggcactaaagccc
aaccccctgcagatggctttcttggcccaacaagccataaaacagtggcagatcagcagt
ggacagggtgccccatcaactgccagcagcacctcttctaccccttctagccctaccatt
actagtgcagcaggatatgacggaaaggcgtttgggtcacccatgattgatctgagctca
ccagtgggaggttcttacaatcttccttctcttccagatattgactgttcaagtacaatt
atgttggagaacattgggagaaaagatactagtgtagaacatggccagccaagaccaccc
tccaacaggacagtccagtcaccaaattcatccgtgccatccccaggccttgcaggacct
gtcactatgactagtgtacatcccccaattcgttcacctagtgcctccagcattgggagc
cgaggaagctctggctcctccagcaaaccagcaggagcagattctacacataaagtgcca
gtggtcatgttggagccgatccgaataaaacaggaaaacagtggaccacctgagaattac
gattttcctgttgttatagtgaaacaagaatctgatgaggaatctaggcctcaaaatacc
agctatccaagaagcatactcacttccctgctcttacacagcggtcagagctctgcttcc
gaggagactgtgccgagatccgatgcccctgacagcacaggagatcagcctggacttcag
caggaaagttcctcaaatgagaagtctgattggctggatgcatcccaaaagtcccctctt
catgttggagagaccaggaaggaagatgatcccaatgaggactggtgcgcggtttgtcag
aacggaggggaactcttatgctgtgacaagtgtcccaaagtattccatctctcttgtcat
gtgcccactctgacaaatttcccaagtggagagtggatttgtactttctgccgagactta
tcaaaaccagaagtcgaatatgattgtgatgctcggagtcacagctcagaaaaacggaaa
gctgacggcctcgtgaaactaaccccagtagataaaaggaagtgtgaacgcctactttta
tttctttattgccatgaaatgagtcttgcttttcaagatcctgttcctttaactgtgcct
gattattacaaaataattaaaaacccaatggatttgtcaaccattaagaaaagactacaa
gaagattatcccatgtacacaaagcctgaagattttgttgctgattttaggcttatcttt
caaaactgtgctgaattcaatgagcctgattcagaagtggccaatgctggtataaaactt
gaaagctattttgaagaacttctaaagaacctttatccagaaaaaagatttcctaaggta
gaattcaggaatgaatctgaagataataaatttagtgatgattcggacgatgactttgtg
cagccccggaagaagcgcctcaaaagtatcgaggaacgccagatgcttaaataa
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