Entry |
|
Name |
|
KO |
|
Organism |
ocu Oryctolagus cuniculus (rabbit)
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Pathway |
ocu04130 | SNARE interactions in vesicular transport |
|
Brite |
KEGG Orthology (KO) [BR:ocu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100348298
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100348298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ocu04131]
100348298
Membrane trafficking [BR:ocu04131]
SNARE
Syntaxin (Qa)
Stx-rER
100348298
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:654342..769201
|
AA seq |
432 aa
MAVDITLLFRASVKTVKTRNKALGVAVGGGVEGSRDELFRRTPRPKGDFSNRAREVISHI
GKLRDFLLEHRKDYINAYSHVLSDCGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTDAHR
EVHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNVKTREA
ISSEKASPNPSKDSGEKPASEEFPEKIVSEAPTDLSTWGDGRGEDELSPEEIQMFEQENQ
RLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQVGKQQEAQNSGIPCGPPQAWAEA
VLPASERFPRSSVGFPAQVGVAGGSPCGQAGWPPDPSFPSVNGGTLQVAVRVRGDLVGRK
RSPLSVSPLTKPPATASVELSAATPSRGACVTETPRPSPHQAIKNNAGFRVWILFFLVMC
SFSLLFLDWYDS |
NT seq |
1299 nt +upstreamnt +downstreamnt
atggcggtggacatcacgctgctgttccgggccagcgtcaagaccgtgaagacgcggaac
aaggcgctgggagtggcagtcggcggcggggtcgagggcagccgcgacgagctcttccgc
cggaccccccggcccaagggtgacttctccaaccgggcccgcgaagtgatttctcatatt
ggcaaactgagagattttcttctggaacataggaaagattatattaatgcttacagccac
gttctgtctgactgtggcaggatgacagacacagagcgagaccagatagaccaggacgcg
cagatcttcatgaggacctgctcggaagcaattcagcagctcaggacagacgcgcacagg
gaggtccactcgcagcaggtgaaggagcacaggacggccgttctggatttcatcgaggac
tacttgaaaagagtgtgtaaactttactcagaacagagagccatccgagttaaacgagtg
gtggacaagaagagattatctaagctggaaccagaaccaaatgtgaaaacaagagaagcc
atctcttccgagaaagcgtcaccgaatccttcaaaggactctggagagaagcctgcctct
gaagagttcccagaaaagattgtgtctgaagcgccgactgacttgagtacctggggagat
ggcagaggagaagacgagttgtccccagaagaaatacaaatgtttgaacaagaaaaccag
cggctcattggggagatgaacagcttgtttgacgaagtgaggcaaatcgaagggaaagtg
gttgaaatttccagactccaagagatattcacggaaaaggtgttgcaacaggtagggaag
caacaagaagcccagaactcagggattccttgtggacccccgcaggcgtgggcggaggcc
gtgctgccagccagtgagcgtttcccccgctcctcagtcggcttcccagcacaggtcggg
gtggcagggggctctccgtgtgggcaagctgggtggcccccagaccccagtttcccatct
gtaaatggagggaccctgcaggttgctgtcagagtcagaggtgacctggtcgggcggaag
cggagcccgctgtcggtttcccctctgacgaagccgcctgctacggcgagcgtagaactg
agcgcggctacaccgagccggggagcctgtgtgacggaaacgccacgcccctctccccac
caggccatcaagaacaacgccggcttccgcgtgtggatcctcttcttcctcgtgatgtgc
tccttctccctgctcttcctcgactggtacgacagctag |