Oryctolagus cuniculus (rabbit): 100348465
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Entry
100348465 CDS
T03373
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100348465
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100348465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_31
HTH_37
HTH_26
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
100348465
NCBI-ProteinID:
XP_051698501
Ensembl:
ENSOCUG00000017211
UniProt:
A0A5F9CVD6
LinkDB
All DBs
Position
2:complement(40917890..41132986)
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AA seq
444 aa
AA seq
DB search
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDK
FGRRSSYGGSTYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
NNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAA
VNHTILALARQGANEIKTEALDDD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcttttccagtggttttgctggaaaccatgtctcactatacagatgaaccc
agatttaccatagagcagatagatctgcttcagcgccttcggcgtactgggatgactaaa
catgaaattctccatgctttggaaactttagaccgtcttgatcaagagcatagtgacaag
tttggaagaaggtccagctatggaggaagtacatacgggaacagtaccaacaatgttccg
gcatcttcttctacagctacagcttccacacagactcagcattcgggaatgtccccttca
cccagcaacagttatgatacctcccctcagccttgtactaccaatcaaaatgggagggaa
aataatgagcgattgtccacatccaatggaaagatgtcaccaactcgctaccatgcaaac
agcatgggtcagaggtcatacagttttgaagcctcagaagaggacttagatgtagatgat
aaagtagaggagttaatgaggagggacagcagtgtgataaaagaggaaatcaaagccttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacaggtatcagtcagagc
cggatctctcattggctgttgcagcaaggatcagacctgagtgaacaaaagaaaagagca
ttttaccgatggtatcagctggagaagacaaaccctggggctacactcagtatgagacca
gcccccattccaatagaggaccctgaatggagacaaactcctcccccagtctctgccact
tctggtactttccgactacgacgagggagtcgatttacctggagaaaggagtgcctggct
gtcatggaaagttacttcaatgagaatcaatacccagatgaagcaaagagagaagaaatt
gcaaatgcttgcaatgcagttatacagaagccaggcaaaaagctgtcagatctggaaaga
gttacctccctgaaagtatataattggtttgctaacaggcggaaggaaatcaagaggaga
gccaatatcgaagcagcaatcctggagagtcatgggatcgatgtacagagtccaggaggc
cattccaacagtgatgatgttgatgggaatgactactctgaacaggatacttggcaagta
cgcaatggggaggaggaggagggaagaagttcagagggaggcagagaagcagagaaggat
gacagcacgagccatagtgaccaccaagaccccatctcattagctgtggaaatggcagca
gtcaaccacactatcttggcattggcccgacaaggagccaacgaaatcaagacagaggcc
ctggatgatgactga
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