Oryctolagus cuniculus (rabbit): 100348597
Help
Entry
100348597 CDS
T03373
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X2
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04622
RIG-I-like receptor signaling pathway
ocu05161
Hepatitis B
ocu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100348597
09172 Infectious disease: viral
05161 Hepatitis B
100348597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100348597
03041 Spliceosome [BR:
ocu03041
]
100348597
03036 Chromosome and associated proteins [BR:
ocu03036
]
100348597
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100348597
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100348597
mRNA cycle factors
Common to processing body (P body) and stress granule
100348597
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100348597
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100348597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100348597
NCBI-ProteinID:
XP_002719895
Ensembl:
ENSOCUG00000012338
LinkDB
All DBs
Position
X:26675414..26691558
Genome browser
AA seq
661 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQTGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRGDSRGKSSFFSDRGSGSRGRFDDRGRGDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNVNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSRFSGGFGARD
YRQSSGASSSSFSSSRASSSRSGGGGHGGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagactggaggaagtacagccagcaaagggcgctatattcct
cctcatttaaggaacagagaagctactaaagggttctacgacaaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggatctcgcggtgactcaagaggg
aagtccagtttcttcagtgatcgaggaagtggatcaagaggaaggtttgatgatcgtgga
cgtggtgactatgatggcattggcagccgtggcgacagaagtggctttggcaaatttgaa
cgtggtggaaacagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccaccaagtgaacgcttggaacaggaactcttttctggaggcaacactgggattaacttc
gagaaatacgatgacattccagttgaggcgacaggtaacaactgccctccacatattgag
agtttcagtgatgttgaaatgggagaaattattatgggaaacattgagcttactcgttat
actcgcccaactccagtgcaaaagcatgctattcctattatcaaagagaaaagagacttg
atggcttgtgcccaaacaggatctggaaaaactgcagcatttctcctgcctattttgagt
cagatttattcagatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtat
gggcgtcgcaaacaatacccaatctccttggtattggcgccaacacgagaattggcggta
cagatctatgaggaagccagaaaattttcctaccgatctagagtccgtccttgtgtggtg
tatggtggtgctgatattggtcagcagattcgagacctagaacgtggatgccacttgcta
gtagccactccaggacgtttagtggatatgatggaaagaggaaaaattggattagacttc
tgcaaatatctggtgttagatgaagctgatcggatgttggatatgggttttgaacctcag
atccgcagaatagttgaacaggatactatgcctccaaaaggtgtccgccacactatgatg
tttagtgctactttccctaaggaaatacagatgcttgctcgtgatttcttggatgaatac
atctttctggccgtgggaagagttggctctacttctgagaacatcacacagaaagtagtt
tgggtggaagaatcagacaaacggtcatttctgctcgacctcctaaatgctacaggcaag
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaggatttc
ttgtaccacgaaggatatgcttgtaccagtatccatggagaccgttctcagagagataga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcggcaagaggactggacatttcaaatgtgaaacatgtcatcaactttgacttgccaagt
gatattgaagaatacgtgcatcgcattggccgtacaggacgtgtaggaaaccttggcctt
gccacctcattctttaatgagagaaacgtgaatatcactaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggcagcagtcgtggacgttctaagagtagatttagtggaggatttggtgccagagac
taccgacaaagcagtggtgccagcagttcaagcttcagtagcagccgagcgagcagcagc
cgaagtggtggaggtggccatggtggcagcagaggctttggtggaggtggctatggaggc
ttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtggggt
aactga
DBGET
integrated database retrieval system
