Oryctolagus cuniculus (rabbit): 100348847
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Entry
100348847 CDS
T03373
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100348847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100348847
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100348847
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
HECT type E3
100348847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
100348847
NCBI-ProteinID:
XP_002718504
Ensembl:
ENSOCUG00000009927
UniProt:
A0A5F9DLL4
LinkDB
All DBs
Position
18:15480795..15631767
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AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLPYNGQCPPDIDSEE
YFCVKRIFSGGDQSFSHYCSPQNCGPPDDFRCPDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGVRFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDVNHGLTELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLDDLKELMPD
VGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGEEYLP
VSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatccttcggacagctaggtttgggtggaattgatgaagaa
attgtattagagcccagaaaaagtgacttttttataaataaaaaggttcgagatgtagga
tgtggactcagacacaccgtatttgttttggatgatgggacagtgtacacatgtggatgt
aatgatctgggacaactgggtcatgagaaatccagaaagaaaccagagcaggttgttgcc
ctggatgctcaaaatatcgtagctgtatcatgtggagaagctcatacattagcactaaat
gacaagggacaggtgtatgcttggggtctcgattctgatggacaacttggcctgctagga
tcagaggaatgtatcagagtaccaaggaacattaaaagtttgtcagatatccagatcgta
caagttgcttgcggttattatcattcacttgcactttctaaagcaagtgaagtcttctgt
tggggacagaataaatatggccagttgggtttaggcattgactgtaaaaagcaaacttca
cctcagctgattaagtctttgctcggaatccctttcatgcaagttgctgcaggaggagcc
catagttttgtactcactctttctggagctatctttggatggggacgcaacaaatttggt
caactgggtcttaatgatgaaaatgatagatatgttcctaatttactaaagtcactaaga
tctcagaaaatagtttatatttgttgtggagaagaccatactgctgcactcaccaaggaa
ggaggagtatttacctttggagctggagggtatggtcagttgggtcataactctaccagt
catgagataaatccaaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttactcttttgga
cttggtggtaatgggcagctagggactggttcaacaagcaacaggaaaagtcctttcact
gtgaaaggaaattggctcccttataatggccagtgtccaccagatatagattctgaagaa
tatttctgtgtaaaaagaattttctcaggtggagatcaaagcttttcacattactgtagt
cctcagaactgtgggccaccagatgactttagatgtcctgatccttcaaaacagatatgg
acagtgaatgaagctctaattcaaaaatggctgagctatccctctggaaggtttcctgtg
gagatagccaatgaaatagatggaacattttcttcctctggttgcctaaatggaagtttt
ctagctgttagcaatgatgatcattatagaacaggtgtcagattttcaggggttgatatg
aatgctgctaggcttttattccacaaacttatacagcctgatcatcctcagatatctcag
caggtggcagctagtttggaaaagaatcttattcctaaactgactagttccttacctgat
gttgaagcattgaggttttatcttactctgccagaatgtcccctgatgagtgattccaac
aatttcacaacaatagcaattccctttggtacagctcttgtgaacctagaaaaggcacca
ctgaaagtacttgaaaactggtggtcagtacttgagcctccactattcctcaagatagta
gaactttttaaggaagttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgaaagaagaattttcaacagctttcttcataccgcattaaaggttttagaaatatta
catagggtaaatgagaaaacggggcagattatacagtatgataaattttatatacatgaa
gtacaagaattaatagacataaggaatgattatatcaactgggttcaacagcaggcctat
ggaatggatgtcaaccatggattaactgagttggcagatatccctgtaacaatctgcaca
tatccatttgtatttgatgcccaagcaaaaactactctgttacagacagatgcagtctta
cagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gttattgaatctgtgaatccctgcttaattctagtggtgcgtagagaaaacattgtagga
gatgcaatggaagttcttaggaaaacaaagaacatagattacaaaaagccgctcaaggtt
atatttgttggagaagatgctgttgatgcaggaggggtacgcaaagaatttttcttgctc
atcatgagggaattactggatcctaaatatggcatgtttaggtattatgaagattccagg
cttatttggttttctgataagacatttgaagacagtgatttgttccatttgattggtgtt
atttgtggattagcaatttataattttactattgtggacctccattttcctttggctttg
tataagaaactgctgaaaaagaagccatccctggatgatttgaaagaattaatgcctgat
gttgggagaagcatgcaacagttactggattacccagaagatgatatagaggaaacgttt
tgtctaaactttacgatcacagttgaaaactttggtgcaacagaagtgaaagagctggtt
ctaaatggtgcagacacagctgttaacaaacaaaatcggcaggagtttgttgatgcttat
gtggattacatattcaataaatcagtggcttccctatttgatgcttttcatgcgggcttt
cataaggtctgtggaggaaaagtccttctgctcttccagccaaatgaactacaagcaatg
gttattggaaatacaaattatgattggaaggaactggaaaagaatacagaatacaaaggg
gaatactgggcagaacatcctacaataaaaattttttgggaagtgtttcatgaattacca
ttggaaaagaaaaaacaatttctattatttttgacaggtagtgatcgcattcctattctt
ggtatgaagagtctcaaactagtcatccagtcaacaggaggtggtgaggaatatctccca
gtttctcatacctgttttaatcttctggatcttccgaaatatacagaaaaagaaactctg
cgttctaaactgatccaagctattgatcacaatgaaggcttcagtttaatataa
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