Oryctolagus cuniculus (rabbit): 100348935
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Entry
100348935 CDS
T03373
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X5
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100348935
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocu01001
]
100348935
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100348935
03036 Chromosome and associated proteins [BR:
ocu03036
]
100348935
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
100348935
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100348935
Protein kinases [BR:
ocu01001
]
Serine/threonine kinases: Other
TAF1 family
100348935
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100348935
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
100348935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Opi1
Ribosomal_L44
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
100348935
NCBI-ProteinID:
XP_008270997
Ensembl:
ENSOCUG00000015656
LinkDB
All DBs
Position
X:49832519..49955026
Genome browser
AA seq
1852 aa
AA seq
DB search
MSDTDSDEDSAGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITE
LTANEELTGADGALVNDEGWIRSTEDAVDYSDITEVAEDESRRHQQTMGNLQPLCHSDYD
EDDYDADCEDIDCKLMPPPPPPLGPVKKEKDQDAITNEKVDFSSSSDSESEMGPQEAAQA
ESDDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARR
KRKKKHRELIQEEQNQETECSVESEVDQKCLWDYDYAPPPPPEQCLSDDEITMMAPVESK
FSQSTGDIDKVTDTKPRVAEWRYGPARLWYDMLGVPEDGSGFDYGFKLRKTEHEPVIKCR
VMEDFRKLEEINGTDLLADENFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSS
MTRNAMAYNVQQGFAATLDDDKPWYSIFPIDNEDLVYGRWEDNIIWDAQAMPRLLEPPVL
TLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPE
VKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPL
KKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLIL
AEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLL
QAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRAN
THIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSN
WWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQ
MKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKE
PQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSG
EGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEM
GKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSA
TGRCLKIYRTFRDEEGKEYVRCETVRKPSVIDAYVRIRTTKDEEFIRKFALFDEQHREEM
RKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCP
LYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKS
LVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLP
NTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYN
GPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMM
AVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSV
KYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPG
PYTPQPPDLYDTNTSLSMSRDASVFQDESNMSVLDIPTATTEKAVTQEGEDRDGDLADEE
ERTVQHSQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVGSGGVRPK
QPRVLQENTRMGMENEESMMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSSI
GGYEVSEEEDDEEEEEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacggacagcgacgaagactctgctggaggcggcccattttctttaaccggt
ttccttttcggcaacatcaatggcgcagggcagctggagggagaaagcgtcttggatgat
gagtgcaagaaacacctggcaggcctgggggctttgggcctgggcagcctcatcactgaa
ctcactgcaaacgaagaattgactggagctgatggtgccttggtaaatgatgaaggttgg
attaggagtacagaagatgctgtggattattctgacatcactgaggtggcagaagatgaa
agccgaagacatcagcagacaatggggaacttgcagcccctttgccactcagattatgat
gaagacgactatgatgctgattgtgaagacattgattgcaagttgatgcctccaccacct
ccacccctaggaccagtgaagaaggagaaggatcaggatgctattactaatgagaaagtg
gacttcagtagttcctctgactcagaatctgagatgggacctcaggaagcagcacaggca
gaatccgatgatggaaagctgaccctccctttggccgggattatgcagcatgatgccacc
aagctgttgccgagtgttacagaactttttccagagtttcggcctggaaaggtgttacgc
ttccttcgtctttttggaccagggaagaatgtcccatctgtttggcggagtgctcggaga
aaaaggaaaaaaaagcaccgggagctgatacaggaagagcagaaccaggagacggagtgc
tcagtagaatcagaagttgaccagaagtgtctgtgggactatgactatgctccaccacca
cctccagagcagtgtctttctgatgatgaaatcacaatgatggctcctgtggagtccaag
ttttcccagtcaactggagatatagataaagtgacagataccaaaccaagagtggctgag
tggcgttatggacctgctcgactgtggtatgatatgctgggtgtccctgaagatggcagt
ggatttgactatggcttcaaattgagaaagactgaacatgaacctgtaatcaaatgtaga
gtgatggaggactttagaaaacttgaggaaatcaatggcactgatcttctggctgatgaa
aacttcctgatggtgacacagctgcattgggaggatgatatcatctgggatggggaagat
gtcaaacacaaagggacaaaacctcagcgtgcaagcttggcaggctggcttccttccagc
atgactaggaatgccatggcttacaatgttcagcaaggttttgcagctactctggatgat
gacaaaccttggtactccatttttcccattgacaatgaggatttggtgtatggacgctgg
gaggacaatatcatttgggatgctcaggccatgccccggctgttagagcctcctgttttg
acacttgaccccaatgatgagaacctcattttggagattcctgatgagaaggaagaggct
acctctaattccccctccaaggagagtaagaaagaatcatctctgaagaagagccggatt
ctcctaggaaagactggagtcatcaaggaggaaccacagcagaacatgtctcagccagaa
gtgaaagatccatggaatctctccaatgatgagtattactatcccaaacaacagggtctt
cgaggcacctttggagggaatattatccagcactcaattcccgctgtggaattacggcag
ccattctttcccacccatatggggcccatcaaactacggcagttccatcgcccacctctg
aaaaagtactcctttggggcactgtctcagccaggtccccattcagtccagcctttgctg
aagcacatcaaaaagaaggccaagatgagagaacaagagaggcaagcatcaggtggtgga
gagatgttttttatgcgcacacctcaggacctcacaggcaaagatggagatctcattctt
gcagaatacagtgaggaaaatggacccttaatgatgcaagttggtatggcaaccaagata
aaaaactactataaacggaaacctggaaaagatcctggagccccagattgtaaatatggg
gaaaccgtttattgccatacatctcctttcctgggctctctccatcctggccagttactt
caggcatttgagaacaacctttttcgtgctccaatttatcttcataagatgccagaaact
gacttcctgatcattcgaacgagacagggttactatattcgggaattagtggatattttt
gtggttggccagcagtgccccttgtttgaagttcctggacctaactccaaaagggccaat
acgcatattcgagactttctacaggtttttatataccgcctcttctggaaaagtaaagat
cgaccacggcgaatccgaatggaagatataaaaaaagcctttccttcccattcagaaagc
agcatccggaagaggctaaaactctgtgccgacttcaaacgcacagggatggactcaaat
tggtgggtgctgaagtctgattttcgtttaccaaccgaagaggagattagagctatggtg
tcaccagagcagtgctgtgcttattatagcatgatagctgcagagcagcgactgaaggat
gctggctatggagagaagtctttttttgctccagaggaagaaaatgaggaagatttccag
atgaagattgatgatgaagttcgcactgctccctggaataccactagagcattcattgct
gctatgaagggcaagtgtctcctggaggtcactggggtggcagatcccacagggtgtggt
gaaggattctcctatgtgaagattccaaataaaccaacacagcagaaggatgataaggag
cctcagccagtgaagaagacagtgacaggaacagatgcagaccttcgtcgcctttctctg
aaaaatgccaagcaacttctgcgtaaatttggtgtacccgaggaagagatcaaaaagttg
tcccgctgggaagtgattgatgtggtacgcacaatgtcaacagaacaggctcgctctgga
gaggggcccatgagtaaatttgctcgcggatcaaggttttctgtggctgagcatcaagag
cgttacaaagaggaatgtcagcgcatctttgacctgcagaacaaagttttgtcatcaact
gaagtcttatcaactgacacagacagcagctccgcagaagacagtgattttgaagaaatg
gggaagaacattgaaaacatgttacagaacaagaaaaccagctctcagctatcacgtgaa
cgggaggagcaggagcggaaggaattgcagcggatgctactggcagcaggctcagcagca
tcaggaaacaatcacagagatgatgacacagcttctgtgactagcctcaactcctctgcc
actggtcgttgtctcaagatttatcgtacgtttcgagatgaggagggaaaagagtatgtt
cgctgtgagaccgtccgaaaaccatctgttattgacgcctatgtgcgcatacggaccacg
aaagatgaagaattcattcgaaaatttgccctttttgacgaacagcatcgagaagagatg
cgaaaagaacggcgaaggattcaagagcaactgagacggcttaagaggaaccaggagaag
gagaaacttaagggtcctcctgagaagaaacccaaaaaaatgaaggagcgtcctgacctg
aaactgaaatgtggtgcatgtggtgcaattgggcacatgaggacaaacaaattttgcccc
ctctattatcaaacaaacgctccaccttccaaccctgttgccatgacagaggagcaggag
gaagagttggaaaagacagtcattcataatgataatgaagaacttatcaaggttgaaggg
accaagattgtcttggggaaacagctaattgagagtgcggatgaggttcgcagaaagtca
ctggttctcaagttccctaaacagcagcttcctcccaagaagaaacggcgggttggaacc
actgttcattgtgactatctgaatagacctcataagtccatccaccggcgccggacagat
cctatggtgacattgtcatccatcttggagtctatcatcaatgacatgagagatcttcca
aatacgtacccttttcacactccagtcaatgccaaggttgtgaaggactactacaaaatt
attacccgaccaatggacctacaaacactccgtgaaaatgtgcgtaaacgcctttatcca
tctcgggaagaattcagagagcatttggaactcattgtgaaaaacagtgcaacctacaat
gggccaaagcactcattgactcaaatttctcaatccatgctggatctctgtgatgaaaaa
ctcaaagagaaagaagacaaattggctcgcttagagaaagctatcaaccccttgctggat
gatgatgatcaagtggcattttcttttattctggacaacattgtcacccagaaaatgatg
gcagttccagattcttggccatttcatcacccagttaataagaagtttgttcctgattat
tataaagtgattgtaaatccaatggatttagaaactatccgtaagaatatctccaagcac
aaataccagagtcgggagagctttctagatgatgtaaaccttattctggccaatagtgtt
aagtataatgggcctgagagtcagtataccaagactgctcaggagattgtgaacgtctgt
taccagacattgactgagtatgatgagcatttgactcaacttgagaaggatatttgtaca
gctaaagaagcagctttggaggaagcagaattagaaagcctggacccgatgactccaggg
ccctacacacctcagcctcctgatttgtatgataccaacacatccctcagtatgtctcga
gatgcctctgtatttcaagacgagagcaatatgtcagtcctggatattcccactgccact
acagagaaagcagtaacacaggaaggtgaagacagagatggtgaccttgcagatgaagag
gaaagaactgtgcaacattctcaagccagtgtcctatatgaggatttgcttatgtctgaa
ggagaagatgatgaggaagatgctgggagtgatgaagaaggagataatcctttctctgct
atccagctgagtgagagtggaagtgactctgatgtgggatctggtggtgtaagacccaaa
cagccccgtgtgcttcaggaaaacacaaggatgggcatggaaaatgaagaaagcatgatg
tcctatgagggagacggtggggaggcttcccatggtttggaggatagcaacatcagttat
gggagctatgaggagcctgatcccaagtcgaacacccaagacacaagcttcagcagcatc
ggtgggtatgaggtatcagaggaggaagacgatgaggaggaggaagagcagcgctctggg
ccgagtgtactaagccaggtccacctgtcagaggacgaggaggacagtgaggatttccac
tccattgctggggacagtgacttggactctgatgaatga
DBGET
integrated database retrieval system
