Oryctolagus cuniculus (rabbit): 100349019
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Entry
100349019 CDS
T03373
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100349019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100349019
03036 Chromosome and associated proteins [BR:
ocu03036
]
100349019
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100349019
Coactivators
SAGA/TFTC/STAGA complex
100349019
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100349019
STAGA complex
100349019
TFTC complex
100349019
SAGA complex
100349019
SLIK complex
100349019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WD40_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Nup160
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100349019
NCBI-ProteinID:
XP_008268663
Ensembl:
ENSOCUG00000006303
LinkDB
All DBs
Position
18:48190847..48207663
Genome browser
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLESEGPPTLLPPQAGDGTGEGTVGITNNGPNGSGGNVAAASSAGGD
GGTPKPAVAVSAAAPAGAAPVPAAASEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEVDGAGAEAASSLLSRVTASAPGPAAPDPPGTGASGATVVSGSASG
PAAPGKVGNVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPRKDSVGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagtctgagggacca
ccgacgctgctacctccgcaggcgggtgacggcacaggcgagggcaccgtcggcattacc
aacaacggccccaacggcagtggcgggaacgttgcggcggcgtcgtcggccggcggggat
ggcgggacccccaagcccgcggtggctgtctccgctgctgccccggcgggggcggctccg
gtacctgccgctgcctcggaggctggtgctccccacgaccgacagactctgctggcggtg
ctgcagtttctacggcagagcaacctccgcgaggccgaagaggcgctgcgccgcgaggcc
cggctgctggaagaggcagtagcgggctccggagccccgggagaggtggacggcgccggc
gctgaggcggctagctcgcttctcagccgggtcaccgcctcggcccccggcccggcggcc
cccgaccctccgggcaccggcgcttcgggggcgacggttgtctccggctcagcctcaggt
cctgcggctccggggaaagttggaaatgtcgctgtggaagaccaaccagatgtcagtgct
gtgttgtcggcctacaaccaacaaggagatccgacaatgtatgaagaatactatagtgga
ctcaaacacttcattgaatgttctttggactgccatcgggcagagttatcccaactcttt
tatcctctgtttgtgcacatgtacttggagctggtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcagcagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagaacca
gaaattgaggtgcctttggatgatgaggatgaagagggagaaaatgaagaaggaaaacct
aaaaagaagaagcctagaaaagatagtgttggatccaaaagtaaaaagcaagatcccaat
gctccacctcagaacagaatccctcttcctgagttgaaagactcagataagttggataag
ataatgaatatgaaagaaaccaccaaacgagtgcgccttggaccagactgtttaccatct
atttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcactgat
gattctagtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcgcagtgtcaagcaagcatcagatcttagcctcatagacaaagaatcg
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggccacagtgggcctgtctatggagccagcttcagtccggataggaactatctgctttct
tcttcagaggatggaactgtccgattgtggagccttcaaacatttacttgtttggtagga
tataaaggacacaactacccagtatgggacacacagttttctccatatggatattatttt
gtgtcagggggtcacgaccgagtagctcggctgtgggctacagaccactatcaacctcta
aggatatttgctggccatcttgctgatgtgaattgtaccagattccatccaaattctaat
tacgttgctacgggttctgcagacagaactgtgcggctctgggatgtcttaaacggtaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggatattggacat
ggcttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggttcagt
agagatggtgaaattttggcatcaggttcaatggacaatacagtccggttatgggacgct
atcaaagcatttgaagatttagagactgatgactttactacagccactgggcatataaat
ttacctgagaattcacaggagttattgctgggaacatatatgaccaaatcaacaccagtt
gtacacctccattttactcgaagaaacctggttctagctgcaggagcttatagtccacaa
taa
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integrated database retrieval system