Oryctolagus cuniculus (rabbit): 100349197
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Entry
100349197 CDS
T03373
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100349197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocu03032
]
100349197
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100349197
DNA replication proteins [BR:
ocu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
100349197
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100349197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
100349197
NCBI-ProteinID:
XP_008247448
Ensembl:
ENSOCUG00000012755
UniProt:
G1T411
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
MSRNDKEPFFVKFLKSSDNSECFSKALESMKEFQSEEYLQVITEEEALKIKENDRSLYIC
DPFSGIVFDHLKKLGCRIVGPQVVIFCMQHQRCVPRAEHPVYNMVMSDVTISCTSLEKDK
RDEVHKYAQMMGGRVFRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIEALWEKSQ
ENKIARYTDINMEEFKCPIFLGCIICVTGLCGLDRKTVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVSTQWFFDSIEKGFCQDESIYKMEPKPEAKTVPDTSTPT
GQSNTIDNRTLSDVSHISNINSSCINESIYNSIFNSKLEPTLENLENLDISAFHAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKHFWNKSAHRP
HVVRANWLLECFSKGYMLPEEPYSHANYQPVEIPISDQLGSKRTLLKKNSSFSKKDLAPN
ESHKQADEDLLSQYVNNHTTAVEDEKAEAGKSEVEPCNDSTHVEPCNDSTRVEPCNDSTR
VEPCNDSTHISLQEENQSSASHCCPDVSTVAEEGLFSQKSFLVLGFSRENESNIAKIIRD
NAGKIVTLPSRTVADYAVVPLLGCEVEATVGEVVTNTWLVVCIDCQTLVEPKSNPLFTPV
PVMPGATPLADCVLSFSQCVGAEKDSLTFLANLLGASVQEFFVRKANAKKGMFASTHLVL
KEPGGSKYEAAKKWNIPAVSIAWLLESARTGEKADENCFLIETSLKEEQSLETEITNGVN
LNPDTPVCADVHLEAHRKKAVTPLDVNRLQSKAFRAVLSQHAEQGSASPAVGQPLQKEPS
LHLDTPSKFLCKDKLFKPSFDVKDALAVLETPEGSSQDSKKLSTPLSEVIVKNLKLALAN
SSRNAVALSASPQLKDAQSKKGQEDAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADCR
WSFDETVTHFIYQGRPNDSNREYKSAKERGIHIVSEHWLLECAQEQKHLPESLYPHTYNP
KMSLDISAVQDGRPCHSRPLSAVSVSKDDEADHLPLEENDVDNMATNNKESAPSNENGRD
DSKGALTQTLEMRQNFQRQLQEIMSATAVVKPQGQRSSLSRSGCNSASSTPDSIRSARSG
RSRVLEALRQSRQTVPDMNTEPSQNEQIIWDDPTAREERARLASNLQWPCCPTQHSELQV
DVKTLEDCPFQEPLCVSKIAEQAVCDPGEACVTEAPKQPISEEPETQVRDSHLIPTPQAP
SIAFPLANPPVAPPPREKIIMREEAHEEFKKQYIFQMSSLNPQERIDYCHLIEKLGGLVI
EKQCFDPKCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTAGRFVQEENYEWGSSS
ILDVLTGITEQQRRLALAAMRWRKKIQQRQESGIVEGAFSGWKVVLRVDRAREAGFRRLL
QSGGAKVLRGHSVPLFKEATHLFYDFNCKQKPDDTGLNIADAAAQNVHCLKTEYIADYLV
QEPPPPVEDYCLPGAASSLQNPQPAPDLAQKRKAPAENTKVKRPKV
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattct
gaatgtttttctaaagctcttgagtcaatgaaagaatttcaatcagaagaatatcttcag
gttattacagaggaagaggcgttgaagataaaagagaatgatagatcactttatatctgt
gaccctttcagtggtattgtctttgatcaccttaaaaagcttggttgcagaattgttggt
cctcaagtggtcatattttgtatgcaacaccagcgatgtgtcccaagggctgaacatcca
gtttataatatggttatgtctgatgtaactatatcttgtacaagcctggaaaaagataaa
agggatgaagttcataaatatgcacaaatgatgggtggacgagtattcagagaccttaat
atatcagtaactcatcttattgcaggagaagttggcagcaaaaaatacttagttgctgca
aacctaaagaaacctattttgcttccctcttggatagaagcactttgggagaagtcacaa
gagaataaaatagctagatatactgatataaacatggaagaattcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttgtgtggcttagacaggaagacagttcaacaa
ctgacggttaagcatggaggccagtacatgggacaattgaaaatgaatgaatgtacacac
ctcattgttcaagaaccaaaaggtcaaaaatacgaatgtgctaagagatggaatgtacac
tgtgtgtccacacaatggttttttgacagtattgagaaaggtttttgtcaggatgaatct
atatacaagatggaacctaaaccagaagcaaaaactgtacctgatacttcaactcctact
ggccagagcaacacaattgataatcgcactctttcagatgtcagccatatttccaacata
aactcaagttgcataaatgaatcaatatataattcaattttcaatagcaagttggagcct
acccttgaaaatctagaaaatctggacatcagtgcatttcacgcaccagaagatttatta
gatggttgtcggatatatctctgcggtttcagtggcagaaagctggataaactgagaagg
cttattaacagtggaggtggagttcgttttaaccagcttaatgaagatgtaactcatgta
atcgtgggagattatgatgatgaattgaagcacttttggaataaatcagcccacaggcct
catgttgtgagagcaaactggttgctagagtgttttagtaaaggttacatgcttcctgaa
gagccatatagccatgctaactaccagccagtggaaattccaatttcagatcaacttgga
agcaaaagaacgcttttaaaaaagaacagcagcttctctaagaaagacttggcccctaat
gaaagccacaagcaagctgatgaggatctgctctctcagtatgtgaataatcacaccaca
gcagttgaggatgagaaggccgaagctgggaagtctgaagttgagccctgtaatgattct
acccatgtcgagccctgtaatgattctacccgtgtcgagccctgtaatgattctacccgt
gtcgagccctgtaatgattctacgcacatttctctacaagaagaaaaccagtcttctgcc
agtcattgctgccctgacgtttctacagttgctgaagaaggcttgtttagccaaaagagc
ttccttgttttgggttttagcagagaaaatgaatccaatattgcaaagatcataagagat
aatgctggaaaaatcgtaactcttccaagcagaactgttgctgattatgctgtggttcct
ctgctggggtgtgaagtagaagcaactgttggagaagttgttacaaatacgtggctggtg
gtttgtatagactgtcagaccttagttgagccaaagtcaaatcctctcttcacaccagtc
ccagtaatgccaggagcgactcctttagcggattgtgttctttcctttagccagtgtgtt
ggagctgaaaaagattctctgacatttttagcaaatctccttggagcaagtgttcaagag
ttctttgttcgcaaagccaacgcaaagaaaggcatgtttgcaagtacacatcttgtgtta
aaagagccaggtggttctaaatatgaagctgcaaagaagtggaacatacccgcagtctcc
atagcttggctgttggaatctgctagaacaggagagaaggcagatgaaaactgttttctt
attgaaacttcgctgaaagaagaacaaagtttagaaactgaaataacaaatggagtgaat
ctaaatcctgatactccagtgtgtgctgatgtacacctggaagcccacagaaaaaaagct
gtgacaccgctggacgtgaaccgccttcagagtaaagccttccgcgctgtgctctcccaa
cacgctgagcagggttccgcctccccagctgtaggacagccgcttcagaaggaaccgtct
ttacacctggacacaccatcgaagttcctgtgcaaagacaaactctttaagccttccttt
gatgtgaaggacgcacttgcagttttggaaactccagaagggtccagccaagacagcaag
aaactgagtacccctctctcagaagtcattgtcaaaaacttgaaacttgcgttggcaaat
agctctcgaaatgctgtcgctctctctgccagccctcaactgaaggatgcccaatcaaag
aagggacaggaagatgctccaaagccacttcacaaggtagtggtgtgtgttagtaaaaaa
ctcagcaagaagcagagtgaactaaatgggattgcagcctctttgggggcagattgcagg
tggagttttgatgaaacagtgactcatttcatctatcaaggacggccaaatgacagtaat
cgagagtataaatctgccaaagaaagagggatacacatagtttcagagcactggctttta
gagtgtgcccaagagcaaaaacatcttccagaatctctgtatccacatacgtataatccc
aaaatgagcctggatatcagtgcagtgcaagatggcagaccctgtcatagccgcccactc
tcagctgtctctgtctcaaaggatgacgaggccgatcatttacctttagaagaaaatgat
gtagataatatggccactaacaataaagaatcagcaccatcaaatgaaaatgggagggat
gactctaaaggagctctgacacagaccttggagatgagacagaacttccaaaggcaactg
caggagatcatgtccgccacggcagtagtgaagccccaggggcagaggtcttccctttca
agaagtggctgcaatagtgcctcttcaacccctgacagcattcgctctgctcgaagtgga
cgaagtcgggtcctggaggcactgaggcaatctcgtcaaactgtacctgatatgaacact
gaaccctcccagaacgaacagatcatttgggatgaccctacagccagggaggagcgagca
aggcttgccagcaatttgcagtggccttgttgtcccacacagcactctgagcttcaggtt
gacgttaaaacattggaggactgtcctttccaggaacctttatgtgtttcaaaaattgct
gaacaggctgtctgtgatcctggagaagcatgtgtgactgaagctccgaagcaacctatc
tctgaagaaccagaaacccaagtacgagacagccacctgatccctacacctcaggccccc
agcatcgctttccctctggccaacccacctgtggctccaccccctagggaaaagattata
atgagagaagaggctcatgaagaatttaaaaaacagtacatatttcagatgtcatcgctg
aatcctcaagaacgtattgattattgtcatctgattgaaaaattaggtggattagtgata
gagaaacagtgctttgaccccaaatgcacacacattgtggtgggacacccgctgagaaat
gaaaagtacttagcctcagtggcagctgggaagtgggtgcttcatcgctcctacctggaa
gcctgcagaacagctgggcgctttgtgcaggaagaaaactatgagtggggaagtagttcc
atacttgatgttctgactggaatcacggagcagcaacgaagactagcacttgcggccatg
agatggagaaaaaaaatccagcagagacaagaatcaggcattgttgagggagcatttagc
gggtggaaggttgttttacgtgttgaccgtgcccgagaagcggggttcagacgtcttctt
cagtcaggaggagcaaaggtgctacgtggtcattctgtacctttatttaaagaggccaca
catctcttttatgactttaattgcaagcagaaaccagatgacacaggacttaatatagca
gacgctgctgcccagaatgtgcactgcttgaaaacagaatacattgctgattaccttgtg
caggagcctccccctcccgtggaagattactgcctcccaggagcagcgtcctctctccag
aatccgcagcctgcgcctgacttagcacagaagaggaaagctcccgcagagaacaccaag
gtcaagcggcccaaagtgtag
DBGET
integrated database retrieval system
