Oryctolagus cuniculus (rabbit): 100349294
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Entry
100349294 CDS
T03373
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu04141
Protein processing in endoplasmic reticulum
ocu04150
mTOR signaling pathway
ocu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100349294
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100349294
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100349294
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100349294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100349294
04131 Membrane trafficking [BR:
ocu04131
]
100349294
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100349294
Membrane trafficking [BR:
ocu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100349294
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100349294
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
100349294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_EML
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
100349294
NCBI-ProteinID:
XP_008248147
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEEGGTWEKTHEHSGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVAPGSLIDQPSGQRPACPK
KFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNTWSPRLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVTASATEGQQNEQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgtcatcaacaccgtggacacctcgcacgaggacatgattcacgacgcacag
atggactactacggcacccgcctggccacctgctcctccgacaggtccgtcaagatcttc
gatgtgcgcaacggagggcagatcctcgtcgctgacctcagagggcacgagggtcctgtg
tggcaggtggcctgggcccaccccatgtatggcaacatcctggcatcttgctcctacgac
cggaaagtcatcatctggaaggaggagggcggcacctgggagaagacccacgagcactcg
ggccacgactcctcagtgaactcagtgtgctgggccccgcacgactacggcctcatcctg
gcttgcgggagctcggacggggccatctcgctgctgacctacaccggggaaggccagtgg
gaggtgaagaagatcaacaacgcccacaccatcggctgcaacgcggtcagctgggcgccc
gccgtcgccccgggaagcctcatcgaccagccctcggggcagaggcccgcctgccccaag
aagttcgcgtctggaggctgcgacaacctcatcaagctgtggagggaggaggaggacggc
cagtggaaggaggagcagaagctggaggcacacagcgactgggtccgcgacgtggcctgg
gccccctccatcggcctgcccaccagcaccatcgccagctgctcccaggacggccgtgtg
ttcatctggacttgtgacgatgcctccggcaacacctggtcccccagactgctgcacaag
ttcaacgacgtcgtgtggcacgtgagctggtccatcaccgccaacatcctggccgtctcc
gggggagacaataaggtgaccctgtggaaggagtcggtcgacgggcagtgggtgtgcatc
agcgacgtcaacaagggccaggggtccgtgacggcgtccgccacagagggccagcagaac
gagcagtga
DBGET
integrated database retrieval system