KEGG   Oryctolagus cuniculus (rabbit): 100349354
Entry
100349354         CDS       T03373                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100349354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100349354
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100349354
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd CSTF1_dimer Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Ge1_WD40 Beta-prop_HPS5 VPS8_N PROPPIN Frtz Beta-prop_WDR75_2nd DUF7099
Other DBs
NCBI-GeneID: 100349354
NCBI-ProteinID: XP_051688628
LinkDB
Position
Unknown
AA seq 431 aa
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacagaaccaaagtgggcctgaaggaccgccagcagctgtacaagctcatcatcagc
cagctgctctatgacggctacatcagcatcgccaacggcctcatcaacgagatcaagccg
cagtcggtctgtgcgccctccgagcagctcctgcatctcatcaaactaggaatggaaaat
gatgataccgccgttcagtatgcgatcggccgatcagacacagttgcccctggcacaggg
atcgacctggaatttgatgcagatgtccagaccatgtccccagaggcttccgagtatgaa
acgtgctatgtcacatctcataagggaccgtgccgcgtggctacctatagtagagatggg
cagttgatcgccacgggctctgccgatgcctccataaagatacttgacaccgaaaggatg
ttggccaaaagtgccatgccgatagaggtcatgatgaatgagactgcacaacagaatatg
gaaaaccaccccgtgattcgaactctctacgaccatgtggatgaagtcacatgtctcgct
ttccacccaacagaacagatcctggcctctggctcgagggattatactctgaaattattc
gattattccaaaccatctgcaaaaagggccttcaaatatattcaggaagcggagatgttg
cgctccatctctttccacccttccggagacttcatcctcgtcggcactcagcaccccacc
ctccgcctgtatgacatcaacaccttccagtgctttgtgtcctgcaatcctcaggaccag
cacaccgacgccatatgctctgtcaattacaatccgagtgccaacatgtatgtgactggc
agcaaggacggctgcatcaagctgtgggatggagtctctaaccggtgcatcacgactttt
gagaaggcacatgatggggctgaagtttgctctgccattttttccaaaaattctaaatac
atcctctcaagtggaaaagactctgttgctaaactttgggaaatatcaacaggacgaacg
ctggtcagatacacgggtgcggggttgagtggccggcaggtgcaccggactcaggccgtg
ttcaaccacaccgaggactacgtgctgctgccggacgaaaggacgatcagtctctgctgc
tgggactcgaggacagccgagcggagaaacctgctctccttggggcacaacaacatcgtg
cgctgcatcgtgcactcacccaccaaccccggcttcatgacgtgcagcgacgacttcaga
gcgcgcttttggtacaggaggtcgaccactgactga

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