Oryctolagus cuniculus (rabbit): 100349473
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Entry
100349473 CDS
T03373
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100349473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocu03041
]
100349473
03009 Ribosome biogenesis [BR:
ocu03009
]
100349473
Enzymes [BR:
ocu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100349473
Spliceosome [BR:
ocu03041
]
Complex A
U2 snRNP components
U2 related factors
100349473
Complex B
100349473
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100349473
Ribosome biogenesis [BR:
ocu03009
]
Eukaryotic type
90S particles
Helicases
100349473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
100349473
NCBI-ProteinID:
XP_002709424
Ensembl:
ENSOCUG00000003026
UniProt:
G1SIW1
LinkDB
All DBs
Position
2:complement(15669176..15725519)
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AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSAHSAHSAHSAHSAHSAHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccggttggacttgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggatcgagatcgggaccgggatcgtgaagatcggtccaaagatcga
gaccgagaacgcgatagaggagatagagagcgggagagggagaaagagaaggagaaggaa
ttacgagcttcgacgaatgctatgcttatcagtgctggattaccacctttaaaagcttcc
cattcagcccactcagcccactcagcccactcagcacattcagcacattctgctcattca
gcccacaccggacatgcagggcacacatcacttccacagtgcattaatccattcaccaac
ttaccccatactcctcgatactatgatattctaaagaaacggcttcagctccctgtgtgg
gaatacaaggataggtttacagatattctggttagacatcagtcatttgtactggttggt
gagactgggtctggtaaaacaacacagattcctcagtggtgtgtggagtatatgcgatca
ttaccaggacccaagagaggagttgcctgtacccagccccggagagtggctgcaatgagt
gtggcccagagagttgctgatgaaatggacgtgatgttgggccaggaagttggttattcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatggaatg
ttacttcgtgaagctatgaatgatcccctcctggaacgttatggtgtaataattcttgat
gaggctcatgaaaggacactggctacagatattctcatgggtgttctaaaggaagttgta
agacagagatcagatttaaaggtgatagttatgagtgctactctggatgcaggaaaattc
cagatttacttcgataactgtccactcttaactattcctgggcgtacacatcctgttgag
atcttctatactccagaaccggagagagattatcttgaagcagcaatccgaacagtgatc
cagattcatatgtgtgaagaggaggagggagatcttctgcttttcttaactggtcaagag
gaaattgatgaggcctgtaaaagaataaagcgtgaggttgatgatttgggccctgaagtt
ggtgacattaaaatcattccattgtactctacgcttccacctcagcagcagcagcgtatt
tttgagccgcctcctccaaaaaagcagaatggtgcaattggaagaaaggttgttgtgtca
actaacattgcagagacatctttgacaatagatggtgtggtgttcgtgattgatcctgga
tttgcaaaacaaaaggtatacaatcctcgaatcagagttgagtctctcttagtgacagca
atcagtaaagcttctgcgcagcaaagggctggtagagctggacgcacccgccctgggaag
tgcttccggctgtacacagagaaagcttataagacagagatgcaggataacacctatcct
gagattttgcgttccaatttaggatcagttgtgttacagttgaagaaactgggtattgat
gatttggtgcattttgattttatggatccgccagctcctgaaactctgatgcgagcccta
gaacttttgaattatctggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagaatttccactagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacatt
gatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaatcatgaatcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtctgcagacaatgta
cgccagcagctatcgcgaattatggacagatttaacttgcctcgtcgaagtactgatttt
acaagcagggactattatattaatataagaaaagctttggttactgggtattttatgcag
gtggctcatctagaacggacagggcactacctaactgtgaaagacaaccaggtggttcag
ctgcatccctctactgttcttgatcacaagcctgaatgggtgctctataatgagtttgtt
ctaacaacaaagaattacatccggacatgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcatcattgccaaacttcaatccaaggaatattcacagtactga
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