Oryctolagus cuniculus (rabbit): 100349479
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Entry
100349479 CDS
T03373
Name
(RefSeq) protocadherin beta-2
KO
K16494
protocadherin beta
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocu04515
]
100349479
Cell adhesion molecules [BR:
ocu04515
]
Cadherins
Protocadherins
100349479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Rhv
Motif
Other DBs
NCBI-GeneID:
100349479
NCBI-ProteinID:
XP_017196598
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Position
3:23074824..23077520
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AA seq
819 aa
AA seq
DB search
MEAGRRKGKARVLKQRQVLTFFVLLGIAQARSGPGHYSVAEETESGCFVANLLKDLGLEV
GELAARGPRVVSKGKKMRLQLDRQTGDLLLQEKLDREELCGPVEPCVLPFQVLLENPLQF
FQAELRVRDINDHSPIFLDKEMILKIPEGIPPGTTFLIERAQDLDVGSNGLQNYTISPNI
HFHLKLQGSPDGTALPQLVLDKALDREEEPEIRLTLTALDGGTPPRSGTALVRVEVVDVN
DNAPEFAQLMYEVQVPENSRIGSQVATVSARDSDLGAYGQISYIFSQASEDIRKTFQINA
KSGELILTQELDFESVQTYTVNIQAIDGGGLSGSCVVFVQVMDLNDNPPELSISTLISQI
PENSQETLIAVFSVSDPDSGDNGRIVCSIQDDLPFFLKPSVENFYTLVANAALDRETRAE
YNITITVSDLGTPRLTTRHHVAVQVSDVNDNAPAFSQAAYTLLVRENNSPGLLIGSVSAS
DRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRAADRG
SPALSSEARVRVQLLDANDHAPAVLYPPANGSAACPELVPRAADAGYLVTKVVAVDGDAG
QNAWLSFELLKATEPGLFGVWAHSGEVRTARPLSERDAPRQRLLVLVRDHGEPPLSASVT
LHVLLVDGFSQPYLALPEAAAAAEAARPDSLTVQLVVALAAVSSLLVLSVLALVAARLCG
AGGGGGAGGVGVGAGCAVGGGGGGGGGGAGAEGRFPGPLLDVSGGGTLSHSYQYEVRLTG
DAGTGEFKFMKPISPNFLVNGAERVNEINPSFRNSFEFS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggaaggagaaagggaaaggcacgcgtgctgaaacaaaggcaagtcctgacg
ttctttgttttgctgggcatagctcaggctcgttcggggcctgggcactattcggtggcc
gaggaaacggagagtggctgctttgtggccaatttgttaaaagacctggggctggaggta
ggagaactagctgcgcggggaccccgggtcgtttccaaagggaaaaaaatgcgcttgcag
ttggataggcagaccggggatctgctgttacaagagaagctggaccgggaggagctgtgc
ggccccgtcgagccctgtgtgctgccttttcaggtgttgttggaaaatcccttgcagttt
tttcaggccgagctacgcgttagggacataaatgatcattccccgatttttctagacaag
gaaatgattttgaaaattccagaaggtattcctcctggaacgactttcctaatagagcgt
gcccaggacttagatgtaggaagcaacggtctccaaaattacaccatcagccccaatatc
cacttccatcttaagctacaagggagtcctgatggcacagcactaccacagctggtgctg
gacaaagccctggatcgagaggaggagcctgagatcaggttaaccctcacggcgctggac
ggcgggactccgcccaggtctggcaccgccctggtccgcgttgaagttgtagacgtcaac
gacaatgctcccgagtttgcacagctgatgtatgaggtgcaggtgccggagaacagccgg
attggatcccaggtggccactgtctctgctagggattcagatcttggagcctatggacaa
atatcttatatattttcccaagcctcagaagacattcgcaaaacctttcaaataaatgca
aagtcgggagaactgattctaacgcaggaactggatttcgaatctgttcagacttacaca
gtgaatatccaggcgatcgatggtggaggtctgtctggaagttgtgtggtgttcgtccaa
gtgatggacttgaacgacaaccctccggaactgagcatctcaacactcatcagtcagatc
ccagaaaactcgcaggaaactctaattgccgtattcagtgtttcagatcctgactcgggg
gacaacggaaggatagtttgctccatccaagatgaccttcctttcttcctgaaaccctct
gtagagaacttttacactcttgtggcaaatgcagccctggacagggagaccagggccgag
tacaacatcaccatcaccgtgtccgacctgggcacgcccaggctgaccacccggcaccac
gtcgcggtgcaggtgtccgacgtgaacgacaacgccccggccttcagccaggccgcctac
accctgctggtgcgcgagaacaacagccccgggctgctcatcggctccgtgagcgccagc
gacagggatgcgggcgccaacgcgcaggtgacctactcgctgctgccgccgccacagcag
cccgacgtggcggcgctcgtgtcggtgcacgcggacagcgggcagctgtacgcgctgcgc
gcgctcgactacgaggccctgcgcgccttcgagttcggcgtgcgcgccgccgaccgcggc
tccccggcgctgagcagcgaggcgcgcgtgcgcgtgcagctgctggacgccaacgaccac
gcgccggccgtgctgtacccgccggccaacggctcggccgcctgccccgagctggtgccg
cgcgcggccgacgcgggctacctggtgaccaaggtggtggcggtggacggcgacgcgggc
cagaacgcctggctgtcgttcgagctgctcaaggccacggagcccgggctgttcggcgtg
tgggcgcacagcggcgaggtgcgcacggcgcggccgctgagcgagcgcgacgcgcccagg
cagcggctgctggtgctggtgcgcgaccacggcgagccgccgctgtcggccagcgtcacg
ctgcacgtgctgctggtggacggcttctcgcagccctacctggcgctgcccgaggcggcg
gcggcggccgaggcggcgcggcccgactcgctcacggtgcagctggtggtggcgctggcg
gcggtgtcgtcgctcttggtgctgagtgtgctggcgctggtggcggcgcggctgtgcggc
gcgggcgggggcgggggcgcgggcggtgttggtgtgggggcggggtgtgcggttggcggc
ggcggcggcggcggcggtggcggcgcgggtgcggagggccgcttcccggggccgctgctg
gacgtgagcggcggcgggacgctgtcgcacagctaccagtatgaggtgcgcctgacgggc
gacgccgggaccggggagttcaagttcatgaaacccattagtcccaacttccttgttaac
ggtgcagaaagagttaatgagataaacccgagtttccgaaatagcttcgaattcagttaa
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